Silkworm Genome Informatics Database

Gene

KWMTBOMO02953

Pre Gene Modal

BGIBMGA003566

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_trypsin?_alkaline_A-like_[Bombyx_mori]

Location

Bomo_Chr5(+):14361925-14367713 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 2.371

CDS

ATGATTATTTTTGTTTCAGCTGTTCCAACAAACCCCCAAAGGATTATTGGTGGCTCGACAACCACCATTGACCGGTACCCCGGTATTGTTTCTCTGTTGTTTACAAGGAATTGGAGTCAGTGGTGGCAGGCTTGCGGTGGAAACCTTCTTAACCAGAGATCTGTTCTTTCCGCTGCTCATTGCACATTCGGTGATCAAACGGGTGCATGGCGTCTTCGTGTTGGTTCCACCTGGGCCAACAGTGGGGGTGTTGTGCATCAATTGAACAGAATTATCCATCATCCCAATTATAACAGACAAACAGCTGACAGTGACCTCTGCATCTTACGCAGTAATACCAACATAGTTTTGAACAACAACGTTCGTCCTGTTAATATTGCTGGTTCCAATTACAATCTTGCTGATAACCAACCTGTTTGGGCTGCTGGTTGGGGTGCTACTTCGCTCGGAGGGTCTGGTTCGGAGCAGCTCCGTCACGTCCAGGTCTGGACCATCAATCAGAATACCTGCGCCCAACGTTACAGACCCATTAACCGTTCTATCACCGCTAACATGTTGTGCTCTGGTGTTTTGGACGTTGGTGGTCGCGACCAGTGCCAGGGTGACTCCGGTGGTCCTCTCCTCCACAACAATGTCCTTGTTGGTGTCTGCTCTTGGGGACAGTACTGCGCTGACCGTCGCTACCCTGGCGTCAACGAGAGCGCAGAACCGTGCAGACTGCACGTGTTGCTCGCGTGCCGCTGGCTGCGCGCGCTCGCCTACTTCTGGCGTGCTGACTGCGCGCACTGCTCGCGTGCCGCTACCTGCGCGCGCTCACCTGCTTCAGACGTGCATACTGCGCGCACTGCTCGCGTGCCGCTGGCTGCGCCCACTGCTCGCGTGCCGCTGGCTGCGCGCGCTCATCTACTTCTGGCGCGCATACTGCGCGCACTGCTCGCGTGCCGCTGGCTGTGCACACTGCTCGCGTACCGCTGGCTGCGCGCACTGCTCGCGTGCCGCTGGCTGCGCACACTGCTCGCGTGCCGCTGGCTGCGCGCGCTCATCTACATCTGGCGCGCATACTGCGCGCACTGCTCGCGTGCCGCTACCTGCGCGCGCTCGCCTGCTTCAGACGTGCATACTGCACGTGTTGCTCGCGTGCCGCTGCATGCGTGCGCTCACCTACTTCTGACGTGCATACCGCACGTGTTGCTCGCATGCCGCCAACTGCACGGTGCTGTACGACTGGCAGTGACGCAGAGGGCGATGTCGCTTAGTCTGCGGCCTGCTGCTGCGGACTACCCAACGGATTATCTATCAGGACGGTCGAGCGGGACGCCCGCCACACGTGGTGCAGCCTCACATCATGGGAGCAGACTGGAGCTGGGACGGCTGCCCTGCTTCCACATCATCCTTACGAAGGGTGACCTTGTTGATGCAAGCTCTGACGTAGCTGGAAGAGATATGCTTCTGCTGAGAGATGAAGCGGTCGAGGACGCCTCGCCGTCAGGAACGGCCGTGTTACCGAATCCTGGCAACCTCCGACCGAGAGCCAGCGCTAAAACTATAAAAACGATCCCTCGCTGCGCCTTTGCCTCTTTTTTGTGCGTGGCGTTCGTGTGTGCGGTTCTTGTTGAAACATGTTTGGGATTTGTGTAA

Protein

MIIFVSAVPTNPQRIIGGSTTTIDRYPGIVSLLFTRNWSQWWQACGGNLLNQRSVLSAAHCTFGDQTGAWRLRVGSTWANSGGVVHQLNRIIHHPNYNRQTADSDLCILRSNTNIVLNNNVRPVNIAGSNYNLADNQPVWAAGWGATSLGGSGSEQLRHVQVWTINQNTCAQRYRPINRSITANMLCSGVLDVGGRDQCQGDSGGPLLHNNVLVGVCSWGQYCADRRYPGVNESAEPCRLHVLLACRWLRALAYFWRADCAHCSRAATCARSPASDVHTARTARVPLAAPTARVPLAARAHLLLARILRALLACRWLCTLLAYRWLRALLACRWLRTLLACRWLRALIYIWRAYCAHCSRAATCARSPASDVHTARVARVPLHACAHLLLTCIPHVLLACRQLHGAVRLAVTQRAMSLSLRPAAADYPTDYLSGRSSGTPATRGAASHHGSRLELGRLPCFHIILTKGDLVDASSDVAGRDMLLLRDEAVEDASPSGTAVLPNPGNLRPRASAKTIKTIPRCAFASFLCVAFVCAVLVETCLGFV

Uniprot

NA

ProteinModelPortal

NA

PDB

2VU8 E-value=6.2925e-30, Score=327

KEGG

101737278 no KO assigned | (RefSeq) trypsin, alkaline A-like

GO

GO:0004252 GO:0006508 GO:0006811 GO:0015379 GO:0016021 GO:0003909 GO:0051103 GO:0003677 GO:0006281 GO:0048384

Length:

545

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

20.53851

Exp number, first 60 AAs:

0.00955

Total prob of N-in:

0.02017

outside

1 - 545

Pi

303.062384

Theta

170.776881

Tajima's D

2.106043

CLR

1.737444

CSRT

0.894255287235638

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree