Gene

KWMTBOMO02949

Pre Gene Modal

BGIBMGA003629

Annotation

PREDICTED:_solute_carrier_family_12_member_4_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr5(-):14266395-14287745      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.93

CDS

ATGGAATCAGAAACTTGTTCCTGTTTCGACTCCGTATGTGTATATAAAGAAGGTGACCCCGACGAACATGGACTATCCACGGACAAGAATAAAGGCTGCGACACCAACCTTTATCTCTATCACGAAGAGATCGAGGACCGACCTAGAGCAGCCACGTTCCTCAGCTCACTAGCGGACTATGCGAATACAATCCCCACGGCGTCCGCCGCAGACCCTGATGCCCCCAAGCCAGCCCCACCAGCCCGCATGGGCACGCTCATCGGCGTGTACCTGCCTTGCATCCAGAATATCTTCGGTGTGATCCTATTCATCCGACTCACCTGGGTTGTCGGCACCGCTGGCGCTATACAAGGATTCCTCATTGTTCTAACCTGCTGCTGCACGACGATGTTAACCGCAATATCAATGTCTGCCATCGCAACGAACGGCGTGGTGCCGGCGGGGGGATCGTATTTCATGATCGGTCGGTCCCTGGGGCCGGAGTGCGGCGGGGCGGTCGGCATGCTGTTCTACACGGGTACAACCCTAGCGGCCGCTATGTACATCGTTGGAGCTGTCGAAATCGTACTGACTTACATGGCACCGTGGATATCAATTTTCGGCGATTTCACTAAGGACCCAGAAGCAATGTACAACAATTTCCGCGTCTATGGAACCGGTTTGCTCCTCATTATGGGGATGGTTGTTTTCGTTGGAGTAAAGTTCGTCAACAAATTTGCTACTGTCGCTCTAGCCTGCGTCATCCTCTCCATCACCGCGGTATATGCCGGAATATTCGTCAACTTCTATGGAAACGATAGCTTACAAATGTGTGTACTCGGACGCCGCTTGCTCAAGGATATTCATATTAGCAATTGCACAAAGGACCCAAAAGGCGAACTGCATGCAATGTTCTGTCCCGATAAAATCTGTGACCCCTACTACGAAGCCCATAACATAAGCATTGTGCAAGGAATTAAGGGTCTCGCAAGTGGGGTGTTCTTCGATAACCTCCAGGACTCGTTCATCCAAGAAGGTCAATACATCGCATACGGCAAGGAACCTGACGACATTGAACAGATGGAGAGACCTACCCACAATCAAATTTACGCGGACATCACTACGACTTTCACAATTTTGATAGGCATATTCTTCCCTTCGGTGACCGGCATAATGGCTGGTTCAAATCGCTCCGGAGACTTGGCCGATGCTCAAAAGAGTATTCCAATTGGAACTATTTGTGCGATCCTCACCACTTCCACCGTCTACCTCTCGTGTGTGCTGTTATTTGCTGGCACTGTCGATAATTTGTTACTCAGAGATAAATTCGGTCAATCGATTGGCGGGAAATTAGTCGTTGCGAACATGGCGTGGCCAAACCAATGGGTGATTCTGATCGGCTCATTCCTGTCGACATTGGGCGCGGGACTCCAATCTCTAACCGGTGCGCCGCGACTACTGCAAGCCATCGCCAAAGATGAAATCATTCCTTTTCTCGCTCCATTCGCAGTCTCTTCCAAACGAGGAGAGCCTACCCGGGCCTTACTTCTGACCATGGCAATCTGCCAATGCGGCATCTTACTCGGGAACGTCGACATCTTGGCTCCCCTGTTGTCCATGTTCTTCTTAATGTGCTACGGATTCGTCAACTTGGCTTGTGCTCTTCAAACTCTACTCAAGACCCCGAACTGGCGTCCTCGCTTCAAATACTACCACTGGTAA

Protein

MESETCSCFDSVCVYKEGDPDEHGLSTDKNKGCDTNLYLYHEEIEDRPRAATFLSSLADYANTIPTASAADPDAPKPAPPARMGTLIGVYLPCIQNIFGVILFIRLTWVVGTAGAIQGFLIVLTCCCTTMLTAISMSAIATNGVVPAGGSYFMIGRSLGPECGGAVGMLFYTGTTLAAAMYIVGAVEIVLTYMAPWISIFGDFTKDPEAMYNNFRVYGTGLLLIMGMVVFVGVKFVNKFATVALACVILSITAVYAGIFVNFYGNDSLQMCVLGRRLLKDIHISNCTKDPKGELHAMFCPDKICDPYYEAHNISIVQGIKGLASGVFFDNLQDSFIQEGQYIAYGKEPDDIEQMERPTHNQIYADITTTFTILIGIFFPSVTGIMAGSNRSGDLADAQKSIPIGTICAILTTSTVYLSCVLLFAGTVDNLLLRDKFGQSIGGKLVVANMAWPNQWVILIGSFLSTLGAGLQSLTGAPRLLQAIAKDEIIPFLAPFAVSSKRGEPTRALLLTMAICQCGILLGNVDILAPLLSMFFLMCYGFVNLACALQTLLKTPNWRPRFKYYHW

Uniprot

H9J292   A0A0N0PDE9   A0A2A4K3L9   A0A2W1BKK4   A0A194PVB2   A0A2H1VVD7   + More
A0A2Z4GWW8   A0A0L7LEL9   A0A2M3ZHQ8   A0A1Q3G591   A0A2M4AJX9   A0A1Q3G587   A0A1L8DEP3   A0A1Q3G595   A0A1I8JU73   A0A1B0GIR5   A0A1I8JT46   A0A1W4X8E4   A0A1C7CZA6   A0A1I8JVP3   A0A1I8JT60   A0A1Y9IHS4   A0A1I8JVP2   A0A1I8JVL0   A0A1W4X876   A0A1W4X6Z7   A0A1W4WXM6   H2L215   A0A023F5C7   Q16P15   A0A1I8JVE1   A0A1I8JVB6   A0A1I8JVB5   A0A0A9VUE7   A0A0K8S3J5   A0A0K8S552   A0A0K8S3X9   A0A146M9C9   A0A0A9W1U4   A0A087ZZW6   V9I9A6   V9IA86   V9I7X5   V9I9S9   A0A0L0C9C4   A0A2P8XHN8   T1PD66   A0A0Q9XIN2   A0A0Q9XKJ7   A0A1B6ES16   W8BPR2   A0A1B6G3Y2   B4KMC3   A0A0Q9XM85   A0A0Q9X8Z8   A0A158NKY1   W8C206   A0A1I8M4N6   A0A1I8M4N7   A0A0Q9XI19   T1PD35   A0A1I8M4N4   A0A1I8QA37   A0A034VI57   A0A1I8QA21   A0A0K8V8W7   A0A0K8UL13   A0A3B0JIV8   A0A1I8Q9X8   A0A034VJ83   A0A3B0IYU5   A0A034VKW0   A0A0K8W0Z0   A0A0P8YAI4   A0A1W4UYZ9   A0A154P501   A0A3B0J2E5   A0A3B0IYK7   A0A034VK61   A0A0P9BX49   B3MCM5   A0A0P8Y2U3   A0A0Q5VP73   A0A1W4UM20   A0A1W4UZA2   A0A1W4UZA7   A0A0J9RJF1   A0A0Q5VQ76   A0A1W4V0K7   V5G4T2   A0A0B4LGD3   A0A0P8XN64   A0A0R1DTU3   A0A1W4ULI7   A0A1W4V0K9   A0A0J9RL32   Q9W1G5   A0A0R1DTT7   A0A0N8P044   A0A0P8XN79  

Pubmed

19121390    26354079    28756777    29908900    26227816    20966253    + More
12364791    21813871    25474469    17510324    25401762    26823975    26108605    29403074    25315136    17994087    18057021    24495485    21347285    25348373    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304   

EMBL

BABH01007527    BABH01007528    BABH01007529    KQ460226    KPJ16471.1    NWSH01000167    + More
PCG78861.1    KZ149992    PZC75569.1    KQ459597    KPI95065.1    ODYU01004662    SOQ44790.1    MH048896    AWW06968.1    JTDY01001458    KOB73819.1    GGFM01007302    MBW28053.1    GFDL01000080    JAV34965.1    GGFK01007760    MBW41081.1    GFDL01000077    JAV34968.1    GFDF01009155    JAV04929.1    GFDL01000078    JAV34967.1    AJWK01015337    AJWK01015338    AJWK01015339    AJWK01015340    AJWK01015341    AJWK01015342    AJWK01015343    APCN01001926    APCN01001927    APCN01001928    APCN01001929    AAAB01008966    HM125960    ADM89630.1    GBBI01002394    JAC16318.1    CH477799    EAT36104.1    GBHO01044768    JAF98835.1    GBRD01017965    JAG47862.1    GBRD01017962    JAG47865.1    GBRD01017963    JAG47864.1    GDHC01002276    JAQ16353.1    GBHO01044769    JAF98834.1    JR036560    JR036561    AEY57226.1    AEY57227.1    JR036563    JR036564    AEY57229.1    AEY57230.1    JR036562    AEY57228.1    JR036565    AEY57231.1    JRES01000737    KNC28852.1    PYGN01002098    PSN31506.1    KA646701    AFP61330.1    CH933808    KRG04911.1    KRG04914.1    KRG04917.1    KRG04913.1    GECZ01028984    JAS40785.1    GAMC01003336    GAMC01003335    GAMC01003334    JAC03221.1    GECZ01012625    JAS57144.1    EDW09811.1    KRG04915.1    KRG04912.1    ADTU01019023    ADTU01019024    ADTU01019025    ADTU01019026    GAMC01003337    JAC03219.1    KRG04916.1    KA646702    AFP61331.1    GAKP01016783    JAC42169.1    GDHF01019988    GDHF01018775    GDHF01016925    GDHF01002908    JAI32326.1    JAI33539.1    JAI35389.1    JAI49406.1    GDHF01025264    GDHF01024059    GDHF01010894    GDHF01000286    JAI27050.1    JAI28255.1    JAI41420.1    JAI52028.1    OUUW01000001    SPP73176.1    GAKP01016785    GAKP01016780    JAC42167.1    SPP73175.1    GAKP01016784    JAC42168.1    GDHF01013653    GDHF01007568    JAI38661.1    JAI44746.1    CH902619    KPU76093.1    KQ434809    KZC06268.1    SPP73173.1    SPP73174.1    GAKP01016782    JAC42170.1    KPU76094.1    EDV36259.1    KPU76096.1    CH954179    KQS63069.1    KQS63075.1    CM002911    KMY96163.1    KQS63076.1    GALX01003421    JAB65045.1    AE013599    AHN56590.1    KPU76097.1    CM000158    KRK00502.1    KRK00509.1    KMY96164.1    AAF47099.2    KRK00501.1    KPU76092.1    KPU76091.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000053268    UP000037510    UP000075900    + More
UP000092461    UP000075840    UP000192223    UP000075882    UP000076407    UP000008820    UP000075903    UP000005203    UP000037069    UP000245037    UP000095301    UP000009192    UP000005205    UP000095300    UP000268350    UP000007801    UP000192221    UP000076502    UP000008711    UP000000803    UP000002282   

PRIDE

H9J292    Q9W1G5   

Pfam

PF00324   AA_permease        + More
PF03522   SLC12

Interpro

IPR030364   KCC3        + More
IPR000076   KCL_cotranspt       
IPR004841   AA-permease/SLC12A_dom       
IPR018491   SLC12_C       
IPR004842   SLC12A_fam       
IPR020846   MFS_dom       

CDD

cd06174  MFS

ProteinModelPortal

H9J292   A0A0N0PDE9   A0A2A4K3L9   A0A2W1BKK4   A0A194PVB2   A0A2H1VVD7   + More
A0A2Z4GWW8   A0A0L7LEL9   A0A2M3ZHQ8   A0A1Q3G591   A0A2M4AJX9   A0A1Q3G587   A0A1L8DEP3   A0A1Q3G595   A0A1I8JU73   A0A1B0GIR5   A0A1I8JT46   A0A1W4X8E4   A0A1C7CZA6   A0A1I8JVP3   A0A1I8JT60   A0A1Y9IHS4   A0A1I8JVP2   A0A1I8JVL0   A0A1W4X876   A0A1W4X6Z7   A0A1W4WXM6   H2L215   A0A023F5C7   Q16P15   A0A1I8JVE1   A0A1I8JVB6   A0A1I8JVB5   A0A0A9VUE7   A0A0K8S3J5   A0A0K8S552   A0A0K8S3X9   A0A146M9C9   A0A0A9W1U4   A0A087ZZW6   V9I9A6   V9IA86   V9I7X5   V9I9S9   A0A0L0C9C4   A0A2P8XHN8   T1PD66   A0A0Q9XIN2   A0A0Q9XKJ7   A0A1B6ES16   W8BPR2   A0A1B6G3Y2   B4KMC3   A0A0Q9XM85   A0A0Q9X8Z8   A0A158NKY1   W8C206   A0A1I8M4N6   A0A1I8M4N7   A0A0Q9XI19   T1PD35   A0A1I8M4N4   A0A1I8QA37   A0A034VI57   A0A1I8QA21   A0A0K8V8W7   A0A0K8UL13   A0A3B0JIV8   A0A1I8Q9X8   A0A034VJ83   A0A3B0IYU5   A0A034VKW0   A0A0K8W0Z0   A0A0P8YAI4   A0A1W4UYZ9   A0A154P501   A0A3B0J2E5   A0A3B0IYK7   A0A034VK61   A0A0P9BX49   B3MCM5   A0A0P8Y2U3   A0A0Q5VP73   A0A1W4UM20   A0A1W4UZA2   A0A1W4UZA7   A0A0J9RJF1   A0A0Q5VQ76   A0A1W4V0K7   V5G4T2   A0A0B4LGD3   A0A0P8XN64   A0A0R1DTU3   A0A1W4ULI7   A0A1W4V0K9   A0A0J9RL32   Q9W1G5   A0A0R1DTT7   A0A0N8P044   A0A0P8XN79  

PDB

3GIA     E-value=0.0272416,     Score=89

KEGG

101738757    K14427 solute carrier family 12 (potassium/chloride transporter), member 4/5/6 | (RefSeq) solute car

GO

GO:0071477   GO:0015379   GO:0005887   GO:0030424   GO:0043025   GO:0007638   GO:0055064   GO:0009612   GO:0006884   GO:0055075   GO:1990573   GO:0005886   GO:0003333   GO:0007268   GO:1902476   GO:0015171   GO:0006810   GO:0016020   GO:0006811   GO:0016021   GO:0003909   GO:0051103   GO:0003677   GO:0006281   GO:0048384   GO:0022857   GO:0055085  

PANTHER

PTHR11827:SF66  

Length:

566

Number of predicted TMHs:

9

Exp number of AAs in TMHs:

208.54896

Exp number, first 60 AAs:

0.04885

Total prob of N-in:

0.16128

outside

1  -  83

TMhelix

84  -  106

inside

107  -  118

TMhelix

119  -  141

outside

142  -  177

TMhelix

178  -  200

inside

201  -  212

TMhelix

213  -  235

outside

236  -  239

TMhelix

240  -  262

inside

263  -  363

TMhelix

364  -  386

outside

387  -  400

TMhelix

401  -  423

inside

424  -  443

TMhelix

444  -  466

outside

467  -  525

TMhelix

526  -  548

inside

549  -  566

 

 

Pi

292.227814

Theta

191.631145

Tajima's D

1.669647

CLR

0.407001

CSRT

0.820058997050148

Interpretation

Uncertain