Gene

KWMTBOMO02943

Pre Gene Modal

BGIBMGA003563

Annotation

PREDICTED:_mimitin?_mitochondrial_[Papilio_machaon]

Location

Bomo_Chr5(+):14209006-14211165      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.151 Mitochondrial   Reliability : 1.391 Nuclear   Reliability : 1.27

CDS

ATGGCAGTTTTTGTCTGTACTATGTCTAATGGAGAATATCGACAAGTATGGCGCATTGTTTTTAGAAATTTCATTAATTCACTTAGACCAAAACAGGTTACTGGAAACAATGTTGGTAAAGATTACATAGGTAACACTTATTTTGAAATACCTGCTAGTCCAAGTGAAGGTAAAAGAAAGCCATCACGTTGGTATGATCCACCTAAAGGTCAGGATTTCCAAAATCCAATACCAGCCGAATGGGAGTCCTGGTTGAGAATGAGAAGAAAAGAACCACCATCAGAAGAGGAAATAGCAAAAAATGTTGCTATAGCCCAAATAAAGAAGGAGAATGCTGCTAAAATTGAAATGAAGAGGCTTGCAGAGGGCGGATCTCTCCCGGCAGTTCCAGAGAGAGGGCCTCAGTCGTACCCAACTTATGATGAATATTCTACTGGAGACTCAGAAGGTGTCCACTCAAACAAAAAATGA

Protein

MAVFVCTMSNGEYRQVWRIVFRNFINSLRPKQVTGNNVGKDYIGNTYFEIPASPSEGKRKPSRWYDPPKGQDFQNPIPAEWESWLRMRRKEPPSEEEIAKNVAIAQIKKENAAKIEMKRLAEGGSLPAVPERGPQSYPTYDEYSTGDSEGVHSNKK

Uniprot

H9J226   A0A1E1WKG1   A0A1E1WGE6   A0A2W1BPS5   A0A2A4K456   A0A212FEZ7   + More
A0A2H1V1S6   A0A0N1IB01   A0A194PNQ7   V5G9Y9   D6WAK3   A0A182MYC3   A0A067R041   A0A182GYX2   A0A023EFC6   A0A0K8TQA0   A0A182PTJ9   A0A182QM87   A0A1S4F7K0   A0A182WUS0   A0NDZ8   A0A182HFT0   A0A2J7PC16   Q17CW4   W5JI25   T1PI10   A0A182VTA5   A0A182JFP3   A0A182MC23   A0A084VKV8   A0A1A9ZDD4   A0A1B0F9P0   A0A2M3ZJM3   A0A0P6J945   A0A2M4C2W0   A0A2M4C2F7   A0A182YA21   A0A182SAY7   A0A182FUJ0   A0A1W4UW53   A0A0L0C5X9   A0A0J9R6D0   B3NKT6   M9NEW0   A0A2M4AWA9   A0A182JXL6   A0A1A9V9S9   A0A226F1Y1   A0A0P5R385   B4P6Y7   A0A1Q3FLC0   A0A1B0B7P6   A0A1A9XL35   B4IFL6   A0A0N8DNU6   A0A1D2MPN6   A0A0P9A3Q8   A0A1Y1N7Z6   A0A1Q3FLI5   A0A0P5ZP51   A0A1A9WKT7   A0A182RLQ9   A0A034WHS5   A0A0C9RLB6   A0A1I8QBF6   A0A2R5LHK4   A0A3B0KEX3   A0A1L8EBA6   A0A1L8EC29   A0A1J1IVS6   A0A0K8U1R0   B4GJJ4   B5DHS6   J3JU75   A0A1D2M1V2   W8C876   B4JDW2   B4N7C7   A0A1W4X6C5   A0A1B0CG69   B0X4Y7   A0A1S3D3I4   A0A0L7KSC4   A0A0M3QU68   A0A131Y8F5   A0A293MS95   V5I4X2   A0A0K8R9J7   B4KF48   A0A1L8E161   A0A1D2AJ99   B7PMP8   A0A131XS76   A0A224XNC1   A0A224YUI2   A0A069DNV6   G3MQ45  

Pubmed

19121390    28756777    22118469    26354079    18362917    19820115    + More
24845553    26483478    24945155    26369729    12364791    14747013    17210077    17510324    20920257    23761445    25315136    24438588    25244985    26108605    22936249    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    27289101    28004739    25348373    15632085    22516182    23537049    24495485    26227816    25765539    28049606    28797301    26334808    22216098   

EMBL

BABH01007533    GDQN01003589    JAT87465.1    GDQN01004981    GDQN01002446    GDQN01001595    + More
JAT86073.1    JAT88608.1    JAT89459.1    KZ149992    PZC75565.1    NWSH01000167    PCG78849.1    AGBW02008872    OWR52319.1    ODYU01000103    SOQ34302.1    KQ460226    KPJ16467.1    KQ459597    KPI95061.1    GALX01007637    JAB60829.1    KQ971312    EEZ98642.1    KK853137    KDR10793.1    JXUM01098411    KQ564418    KXJ72316.1    GAPW01005586    JAC08012.1    GDAI01001041    JAI16562.1    AXCN02002050    AAAB01008933    EAU76757.1    APCN01005572    NEVH01027073    PNF13872.1    CH477303    EAT44210.1    ADMH02001479    ETN62419.1    KA647770    AFP62399.1    AXCM01000338    ATLV01014308    KE524956    KFB38602.1    CCAG010005373    GGFM01007951    MBW28702.1    GDIQ01021205    JAN73532.1    GGFJ01010350    MBW59491.1    GGFJ01010351    MBW59492.1    JRES01000842    KNC27803.1    CM002910    KMY91294.1    CH954179    EDV54459.1    AE014134    AY051903    AFH03795.1    AGW52171.1    GGFK01011671    MBW44992.1    LNIX01000001    OXA63478.1    GDIQ01126105    JAL25621.1    CM000158    EDW89956.1    GFDL01006720    JAV28325.1    JXJN01009697    CH480833    EDW46438.1    GDIP01015479    JAM88236.1    LJIJ01000761    ODM94735.1    CH902620    KPU73191.1    GEZM01010526    GEZM01010525    JAV94011.1    GFDL01006667    JAV28378.1    GDIP01054326    JAM49389.1    GAKP01005272    JAC53680.1    GBYB01007711    JAG77478.1    GGLE01004875    MBY09001.1    OUUW01000006    SPP82158.1    GFDG01002904    JAV15895.1    GFDG01002627    JAV16172.1    CVRI01000062    CRL04208.1    GDHF01032074    JAI20240.1    CH479184    EDW36810.1    CH379058    EDY69853.1    BT126788    KB631815    AEE61750.1    ERL86438.1    LJIJ01006756    ODM86922.1    GAMC01000092    JAC06464.1    CH916368    EDW03482.1    CH964182    EDW80268.1    AJWK01010790    AJWK01010791    AJWK01010792    DS232359    EDS40602.1    JTDY01006277    KOB66148.1    CP012523    ALC40109.1    GEFM01000699    JAP75097.1    GFWV01018976    MAA43704.1    GANP01000875    JAB83593.1    GADI01005966    JAA67842.1    CH933807    EDW13031.1    GFDF01001647    JAV12437.1    GETE01000079    JAT79266.1    ABJB010110070    ABJB010413306    ABJB010704850    DS748754    EEC07870.1    GEFH01000055    JAP68526.1    GFTR01002439    JAW13987.1    GFPF01010121    MAA21267.1    GBGD01003379    JAC85510.1    JO843996    AEO35613.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000007266    + More
UP000075884    UP000027135    UP000069940    UP000249989    UP000075885    UP000075886    UP000076407    UP000007062    UP000075840    UP000235965    UP000008820    UP000000673    UP000095301    UP000075920    UP000075880    UP000075883    UP000030765    UP000092445    UP000092444    UP000076408    UP000075901    UP000069272    UP000192221    UP000037069    UP000008711    UP000000803    UP000075881    UP000078200    UP000198287    UP000002282    UP000092460    UP000092443    UP000001292    UP000094527    UP000007801    UP000091820    UP000075900    UP000095300    UP000268350    UP000183832    UP000008744    UP000001819    UP000030742    UP000001070    UP000007798    UP000192223    UP000092461    UP000002320    UP000079169    UP000037510    UP000092553    UP000009192    UP000001555   

PRIDE

H9J226    M9NEW0   

Pfam

PF05071   NDUFA12        + More
PF08513   LisH

Interpro

IPR007763   NDUFA12        + More
IPR006594   LisH       
IPR037190   LIS1_N       

SUPFAM

SSF109925   SSF109925       

ProteinModelPortal

H9J226   A0A1E1WKG1   A0A1E1WGE6   A0A2W1BPS5   A0A2A4K456   A0A212FEZ7   + More
A0A2H1V1S6   A0A0N1IB01   A0A194PNQ7   V5G9Y9   D6WAK3   A0A182MYC3   A0A067R041   A0A182GYX2   A0A023EFC6   A0A0K8TQA0   A0A182PTJ9   A0A182QM87   A0A1S4F7K0   A0A182WUS0   A0NDZ8   A0A182HFT0   A0A2J7PC16   Q17CW4   W5JI25   T1PI10   A0A182VTA5   A0A182JFP3   A0A182MC23   A0A084VKV8   A0A1A9ZDD4   A0A1B0F9P0   A0A2M3ZJM3   A0A0P6J945   A0A2M4C2W0   A0A2M4C2F7   A0A182YA21   A0A182SAY7   A0A182FUJ0   A0A1W4UW53   A0A0L0C5X9   A0A0J9R6D0   B3NKT6   M9NEW0   A0A2M4AWA9   A0A182JXL6   A0A1A9V9S9   A0A226F1Y1   A0A0P5R385   B4P6Y7   A0A1Q3FLC0   A0A1B0B7P6   A0A1A9XL35   B4IFL6   A0A0N8DNU6   A0A1D2MPN6   A0A0P9A3Q8   A0A1Y1N7Z6   A0A1Q3FLI5   A0A0P5ZP51   A0A1A9WKT7   A0A182RLQ9   A0A034WHS5   A0A0C9RLB6   A0A1I8QBF6   A0A2R5LHK4   A0A3B0KEX3   A0A1L8EBA6   A0A1L8EC29   A0A1J1IVS6   A0A0K8U1R0   B4GJJ4   B5DHS6   J3JU75   A0A1D2M1V2   W8C876   B4JDW2   B4N7C7   A0A1W4X6C5   A0A1B0CG69   B0X4Y7   A0A1S3D3I4   A0A0L7KSC4   A0A0M3QU68   A0A131Y8F5   A0A293MS95   V5I4X2   A0A0K8R9J7   B4KF48   A0A1L8E161   A0A1D2AJ99   B7PMP8   A0A131XS76   A0A224XNC1   A0A224YUI2   A0A069DNV6   G3MQ45  

KEGG

101739364    K18160 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2 | (RefSeq) mimitin, mito

GO

GO:0009055   GO:0008137   GO:0016020   GO:0045333   GO:0004672   GO:0006310   GO:0003909   GO:0051103   GO:0003677   GO:0006281   GO:0048384  

Length:

156

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

9e-05

Exp number, first 60 AAs:

9e-05

Total prob of N-in:

0.19215

outside

1  -  156

 

 

Pi

158.69454

Theta

151.069755

Tajima's D

-0.861468

CLR

207.605376

CSRT

0.159542022898855

Interpretation

Uncertain