SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02942  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003632
Annotation
PREDICTED:_uncharacterized_protein_C45G9.7_[Plutella_xylostella]
Location in the cell
Cytoplasmic   Reliability : 2.496
 

Sequence

CDS
ATGGCGAAGATGGCATTTCAACACCAGGCTGGAACAGCTATGGAGTGTCTAAGTATACCGATAACTTTACAAAAAGAGGCTGGTGTTGACCCAGATGGAAGAGAAGTAATGAAATGTGGTTTTAAAATAGGAGGAGGCATTGATCAAGACTTTCGTAAGAGCCCCCAGGGATATACAGATAACGGTATTTATGTAACTGAAGTTCATGAAGGAAGTCCAGCAGCAAAATCAGGTTTAAGAATGCATGATAAAATACTACAGTGCAATGGTTATGACTTTACAATGGTAACTCACAAAAAAGCAGTTAGTTATATTAAGAAACACCCTATTCTTAACTTGCTTGTGGCCAGAAAAGGAGTTACATCTACATAA
Protein
MAKMAFQHQAGTAMECLSIPITLQKEAGVDPDGREVMKCGFKIGGGIDQDFRKSPQGYTDNGIYVTEVHEGSPAAKSGLRMHDKILQCNGYDFTMVTHKKAVSYIKKHPILNLLVARKGVTST

Summary

EMBL
BABH01007533    BABH01007534    KZ149992    PZC75564.1    ODYU01000103    SOQ34301.1    + More
GDQN01006687    JAT84367.1    NWSH01000167    PCG78848.1    KQ459597    KPI95060.1    GAIX01013455    JAA79105.1    AGBW02008872    OWR52320.1    GECZ01018178    JAS51591.1    GECU01037328    JAS70378.1    GEDC01007615    JAS29683.1    GEBQ01027000    JAT12977.1    DS235389    EEB15479.1    GFTR01002084    JAW14342.1    GDKW01000602    JAI55993.1    GECL01000069    JAP06055.1    GBBI01000175    JAC18537.1    GBGD01003485    JAC85404.1    PYGN01001874    PSN32375.1    GBHO01022929    GBRD01014379    GDHC01017203    GDHC01008714    JAG20675.1    JAG51447.1    JAQ01426.1    JAQ09915.1    AK417660    BAN20875.1    KQ414632    KOC67127.1    ACPB03007695    GFDL01010202    JAV24843.1    DS231990    EDS30650.1    CH477317    EAT43730.1    EAT43732.1    JXUM01099623    KQ564506    KXJ72169.1    NEVH01007828    PNF35117.1    KZ288232    PBC31535.1    KQ435922    KOX68635.1    AXCN02000366    GFDF01000783    JAV13301.1    AJVK01059230    AXCM01007282    ATLV01021973    KE525326    KFB47042.1    AAAB01008960    EAA11322.2    APCN01001540    AJWK01010315    QOIP01000010    RLU18100.1    ADTU01017434    GL448740    EFN83959.1    GGFM01005869    MBW26620.1    GGFK01012095    MBW45416.1    ADMH02001639    ETN61655.1    GL434548    EFN74782.1    GGFJ01010751    MBW59892.1    GDAI01001876    JAI15727.1    NNAY01000100    OXU30985.1    JRES01000215    KNC33236.1    GL887813    EGI69979.1    GFXV01006324    MBW18129.1    ABLF02037161    GGMR01011507    MBY24126.1    CH940647    EDW69448.1    CM002912    KMY96699.1    CH933809    EDW18050.1    OUUW01000012    SPP87499.1    CH379070    EAL30305.1    CM000159    EDW92737.1    CH902618    EDV39488.1    CH963847    EDW73372.1    CH480817    EDW49944.1    CH916366    EDV96069.1    CH954178    EDV50063.1    AE014296    AY069359    KX531760    AAF47399.1    AAL39504.1    ANY27570.1    GGMS01004834    MBY74037.1    UFQT01000004    SSX17252.1    CCAG010020479    JXJN01011858    GAMD01000657    JAB00934.1    AAZX01016693    AAZX01019382    GBYB01005658    JAG75425.1    GBXI01009353    GBXI01001180    JAD04939.1    JAD13112.1    GDHF01027521    GDHF01023541    JAI24793.1    JAI28773.1    KQ460226    KPJ16466.1    GEZM01070134    JAV66437.1    LJIG01022763    KRT78847.1    KQ971307    EFA11159.2    GANP01004493    JAB79975.1    ABJB010002302    ABJB011039511    DS727794    EEC06833.1   
Pfam
PF00595   PDZ
Interpro
IPR001478   PDZ        + More
IPR036034   PDZ_sf       
IPR017268   Tax1-binding_p3       
SUPFAM
SSF50156   SSF50156       
PDB
2VZ5     E-value=7.02868e-16,     Score=198

Ontologies

Topology

Length:
123
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00116
Exp number, first 60 AAs:
0.00052
Total prob of N-in:
0.35225
outside
1  -  123
 
 

Population Genetic Test Statistics

Pi
149.317133
Theta
183.026916
Tajima's D
-0.579523
CLR
14.495959
CSRT
0.229188540572971
Interpretation
Uncertain
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