Gene

KWMTBOMO02941  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003562

Annotation

NADH_dehydrogenase_1_alpha_subcomplex_subunit_5_[Bombyx_mori]

Location

Bomo_Chr5(+):14206276-14206973      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.114

CDS

ATGGGTTTATTAAAAAAGACAACAGGTCTAACAGGATTGGCAGTCGCCGCAAATCCGCATCACACTTTGGGCGCCCTATATGGTAAAATCTTACGTACTCTCCAAAAAATGCCAGAAACATCAGTTTATCGTAAATATACGGAACAAATAGTACGTGAAAGAGCAGCGGTTTTAACTCAGACTAAAGACAGCTTTGAAATCGAAAAGAAAATCAACTGCGGTCAAGCTGAGGAATTGATAATTCAAGCTGAAAATGAATTAAACCTAGCTAGGAAGATGTTAAATTGGAAGCCGTGGGAACCACTAATGGCTAAGCCTCCTAAAGGTCAATGGGAATGGCCTCCATCTAAAGCTTAA

Protein

MGLLKKTTGLTGLAVAANPHHTLGALYGKILRTLQKMPETSVYRKYTEQIVRERAAVLTQTKDSFEIEKKINCGQAEELIIQAENELNLARKMLNWKPWEPLMAKPPKGQWEWPPSKA

Uniprot

H9J225   Q1G0N4   A0A0L7KSC1   A0A212FEZ8   A0A0N1IIK2   S4NXE9   + More
I4DK45   A0A2W1BUY1   A0A2A4K3L6   A0A1E1WDB2   A0A2H1V0C5   A0A1B0CRS4   A0A1B0CJQ6   A0A2P8XLU3   A0A2J7R2Q5   A0A1L8E0G1   A0A1Y1MUQ6   D6X292   A0A182Y179   A0A182LJ73   A0A182QLJ1   V5GFE4   A0A182SZT9   A0A0K8TSU9   Q1HQT0   A0A2M4CNF4   A0A1Q3FKX8   A0A182FDM6   B0WLS3   A0A023EFW7   A0A2H1WMG4   A0A2M3Z686   A0A182RRV3   A0A182GZH1   A0A084VCA6   B4LB56   A0A182VB56   A0A182UDI7   A0A182XMZ3   Q7PNP3   A0A182HWU9   A0A2M4C509   A0A2M4C4M6   T1DJH3   A0A182WB26   A0A1S4F8R1   A0A2M4C3B0   Q0IFI1   C4WUD5   W5JFR1   A0A1A9WTA2   A0A2S2P7F5   J9K5T5   A0A2M4AFK0   A0A067RC26   A0A2M4AFZ0   A0A1I8QB73   A0A182PHK0   A0A1A9Y053   B4L9G6   A0A1A9UG23   A0A182JBP1   A0A1I8M7P5   A0A2H8TJC9   B4PEG9   Q9VTB4   B4HDR3   B4QP91   B3NCN0   A0A0A1WEU3   A0A1W4UV17   A0A1L8EEP4   A0A1D2MW47   A0A0P5F2H7   A0A0P4XNG0   A0A0P5AFP3   Q29E06   B4H439   A0A0P5HUK1   A0A0P5YA62   A0A0N8D3P7   A0A0P5HQ27   A0A0N8DB15   A0A0P6D5H1   A0A0P6D7H0   A0A0P6H4W8   A0A0P5D8A8   A0A293M0Q4   A0A1L8EF84   A0A182NGT9   A0A1E1X0T2   W8C0Z7   A0A0M3QW54   A0A0P5TXP9   A0A034WVB1   B4MLV5   A0A0N8DM33   A0A1B6KJS4   A0A224YWE1   A0A224Z4Q8  

Pubmed

19121390    26227816    22118469    26354079    23622113    22651552    + More
28756777    29403074    28004739    18362917    19820115    25244985    20966253    26369729    17204158    24945155    26483478    24438588    17994087    12364791    14747013    17210077    17510324    20920257    23761445    24845553    25315136    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    25830018    27289101    15632085    28503490    24495485    25348373    28797301   

EMBL

BABH01007534    DQ534194    ABF60226.1    JTDY01006277    KOB66147.1    AGBW02008872    + More
OWR52321.1    KQ460226    KPJ16465.1    GAIX01009059    JAA83501.1    AK401663    KQ459597    BAM18285.1    KPI95059.1    KZ149992    PZC75563.1    NWSH01000167    PCG78847.1    GDQN01006098    JAT84956.1    ODYU01000103    SOQ34300.1    AJWK01025249    AJWK01014849    PYGN01001758    PSN32971.1    NEVH01007828    PNF35119.1    GFDF01001864    JAV12220.1    GEZM01020392    JAV89279.1    KQ971371    EFA10821.1    AXCN02000366    GALX01005772    JAB62694.1    GDAI01000166    JAI17437.1    DQ440364    ABF18397.1    GGFL01002684    MBW66862.1    GFDL01006891    JAV28154.1    DS231990    EDS30651.1    GAPW01005847    JAC07751.1    ODYU01009642    SOQ54218.1    GGFM01003282    MBW24033.1    JXUM01099624    KQ564506    KXJ72171.1    ATLV01010628    KE524589    KFB35600.1    CH940647    EDW68620.1    AAAB01008960    EAA11832.4    APCN01001541    GGFJ01010927    MBW60068.1    GGFJ01010950    MBW60091.1    GAMD01001446    JAB00145.1    GGFJ01010669    MBW59810.1    CH477317    EAT43733.1    AK341020    BAH71505.1    ADMH02001639    ETN61654.1    GGMR01012754    MBY25373.1    ABLF02021646    GGFK01006248    MBW39569.1    KK852744    KDR17347.1    GGFK01006227    MBW39548.1    CH933816    EDW17341.1    GFXV01001593    MBW13398.1    CM000159    EDW94035.1    AE014296    AY070675    AAF50138.2    AAL48146.1    CH480815    EDW41003.1    CM000363    CM002912    EDX09989.1    KMY98872.1    CH954178    EDV51327.1    GBXI01017302    JAC96989.1    GFDG01001607    JAV17192.1    LJIJ01000461    ODM97226.1    GDIQ01263962    JAJ87762.1    GDIP01248947    LRGB01003123    JAI74454.1    KZS04504.1    GDIP01212906    JAJ10496.1    CH379070    EAL30257.2    CH479208    EDW31154.1    GDIQ01222071    JAK29654.1    GDIP01062172    JAM41543.1    GDIP01071871    JAM31844.1    GDIQ01224671    JAK27054.1    GDIP01051327    JAM52388.1    GDIQ01084671    JAN10066.1    GDIQ01081671    JAN13066.1    GDIQ01024431    JAN70306.1    GDIP01161478    JAJ61924.1    GFWV01008932    MAA33661.1    GFDG01001606    JAV17193.1    GFAC01006309    JAT92879.1    GAMC01001203    JAC05353.1    CP012525    ALC43553.1    GDIP01120563    JAL83151.1    GAKP01000373    JAC58579.1    CH963847    EDW73166.1    GDIP01020383    JAM83332.1    GEBQ01028274    JAT11703.1    GFPF01010099    MAA21245.1    GFPF01010098    MAA21244.1   

Proteomes

UP000005204    UP000037510    UP000007151    UP000053240    UP000053268    UP000218220    + More
UP000092461    UP000245037    UP000235965    UP000007266    UP000076408    UP000075882    UP000075886    UP000075901    UP000069272    UP000002320    UP000075900    UP000069940    UP000249989    UP000030765    UP000008792    UP000075903    UP000075902    UP000076407    UP000007062    UP000075840    UP000075920    UP000008820    UP000000673    UP000091820    UP000007819    UP000027135    UP000095300    UP000075885    UP000092443    UP000009192    UP000078200    UP000075880    UP000095301    UP000002282    UP000000803    UP000001292    UP000000304    UP000008711    UP000192221    UP000094527    UP000076858    UP000001819    UP000008744    UP000075884    UP000092553    UP000007798   

PRIDE

H9J225    Q1G0N4    Q9VTB4   

Pfam

PF04716   ETC_C1_NDUFA5

Interpro

IPR006806   NDUFA5       

ProteinModelPortal

H9J225   Q1G0N4   A0A0L7KSC1   A0A212FEZ8   A0A0N1IIK2   S4NXE9   + More
I4DK45   A0A2W1BUY1   A0A2A4K3L6   A0A1E1WDB2   A0A2H1V0C5   A0A1B0CRS4   A0A1B0CJQ6   A0A2P8XLU3   A0A2J7R2Q5   A0A1L8E0G1   A0A1Y1MUQ6   D6X292   A0A182Y179   A0A182LJ73   A0A182QLJ1   V5GFE4   A0A182SZT9   A0A0K8TSU9   Q1HQT0   A0A2M4CNF4   A0A1Q3FKX8   A0A182FDM6   B0WLS3   A0A023EFW7   A0A2H1WMG4   A0A2M3Z686   A0A182RRV3   A0A182GZH1   A0A084VCA6   B4LB56   A0A182VB56   A0A182UDI7   A0A182XMZ3   Q7PNP3   A0A182HWU9   A0A2M4C509   A0A2M4C4M6   T1DJH3   A0A182WB26   A0A1S4F8R1   A0A2M4C3B0   Q0IFI1   C4WUD5   W5JFR1   A0A1A9WTA2   A0A2S2P7F5   J9K5T5   A0A2M4AFK0   A0A067RC26   A0A2M4AFZ0   A0A1I8QB73   A0A182PHK0   A0A1A9Y053   B4L9G6   A0A1A9UG23   A0A182JBP1   A0A1I8M7P5   A0A2H8TJC9   B4PEG9   Q9VTB4   B4HDR3   B4QP91   B3NCN0   A0A0A1WEU3   A0A1W4UV17   A0A1L8EEP4   A0A1D2MW47   A0A0P5F2H7   A0A0P4XNG0   A0A0P5AFP3   Q29E06   B4H439   A0A0P5HUK1   A0A0P5YA62   A0A0N8D3P7   A0A0P5HQ27   A0A0N8DB15   A0A0P6D5H1   A0A0P6D7H0   A0A0P6H4W8   A0A0P5D8A8   A0A293M0Q4   A0A1L8EF84   A0A182NGT9   A0A1E1X0T2   W8C0Z7   A0A0M3QW54   A0A0P5TXP9   A0A034WVB1   B4MLV5   A0A0N8DM33   A0A1B6KJS4   A0A224YWE1   A0A224Z4Q8  

PDB

5GUP     E-value=1.14428e-22,     Score=256

KEGG

100101189    K03949 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5 | (RefSeq) NADH dehydrogenase 1

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0022904   GO:0005747   GO:0016491   GO:0003954   GO:0006120   GO:0005743   GO:0016651   GO:0046872   GO:0004672   GO:0006310   GO:0003909   GO:0051103   GO:0003677   GO:0006281   GO:0048384  

PANTHER

PTHR12653  

Length:

118

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.23627

Exp number, first 60 AAs:

0.23627

Total prob of N-in:

0.11174

outside

1  -  118

 

 

Pi

147.925901

Theta

165.109058

Tajima's D

-0.304063

CLR

87.262546

CSRT

0.290835458227089

Interpretation

Uncertain