Gene

KWMTBOMO02936  Validated by peptides from experiments

Annotation

uncharacterized_protein_LOC778510_[Bombyx_mori]

Location

Bomo_Chr5(-):14166683-14168475      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 3.547

CDS

ATGGCACAAACAGCGGGTGTTAAACCTATGACGATAGTTGGTCGCGTAGCCAGTGAAAGGGAAAGATGTCTTGGTATGACTGATGCAGAAAGGGCTTGGCGTAAGCAATGGTTAAAAGATCAAGTTTTAGCCGCTCACGAGCCAGTTCACGTGGAAGAATATTGGAGAGAGCGTACTAATCCTATTCGTCGTTTTTACCGGAAACCCTTGGACGTACTCTTTGCGAAACTTACCCCAATGCTGGGAGAACAACGTGCTGCACATTATAGATATATATCTGGAAAACTTGGTTTAATCGCTGTGGCTATGCTATCAACACATTACTACTTTAAATATTTAGGAAACGACTGGACAAAGAAGGGTGGTTGGAAAGTACTAAAAACCAAACCAATGGTTCTTCCTGGACAACCTGGATTCCCATTCAAATCTGAGAAAACCGATTCTGATTACGCTGAAAGGAAATTCAAGAGCTCTGTTATTTAA

Protein

MAQTAGVKPMTIVGRVASERERCLGMTDAERAWRKQWLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKPLDVLFAKLTPMLGEQRAAHYRYISGKLGLIAVAMLSTHYYFKYLGNDWTKKGGWKVLKTKPMVLPGQPGFPFKSEKTDSDYAERKFKSSVI

Uniprot

A0FDR2   S4NNG4   A0A212FF15   A0A0N1IPM2   I4DKI2   A0A194PNP8   + More
A0A2H1V7Z2   A0A2W1BRZ6   A0A2A4K4Z6   A0A0L7KNJ0   A0A1L8E162   A0A023EG32   A0A182H4X5   W5JUX8   A0A182MHR1   A0A2M4CV22   A0A2M3Z495   A0A2M4C1L4   T1DJ84   A0A2M4AFC2   A0A182WHI5   A0A182RRI5   A0A1Q3FIX2   A0A182NUW8   A0A2J7R2Q2   A0A182P3C2   A0A1B0D6Z1   B0W0C0   Q16WX6   A0A182Y5L0   A0A182JNG2   T1DIX5   A0A182VP76   A0A182UE48   Q7PM07   A0A182XCH4   A0A1I8PPX4   A0A182JH70   A0A182QT19   A0A182ICM9   A0A182F3S7   A0A1B0EX50   A0A0K8TPK0   U5EPQ1   D6X1A2   A0A1L8EEP8   V5GXL2   A0A1A9ZTH3   A0A1I8NGP2   A0A0A9ZHC0   A0A1A9UIT0   A0A1B0AKL7   A0A336K4K4   A0A0L0CN01   A0A1A9YA35   A0A1B0GD88   A0A1B6DKV6   A0A1W4WW49   B4KKX9   A0A226CVU9   B4N019   A0A224XZM4   A0A069DWA7   K7J429   A0A0A9WPN4   A0A2R7VSR6   B4M9J9   A0A1A9X493   B3ML22   A0A0V0G590   R4G4E8   J3JVU1   A0A3B0KFL7   A0A232EFC3   A0A0K8W7F0   B4JQ71   A0A1J1IJN1   W8CBZ4   A0A1W4V387   A0A034WT69   A0A0C9RNB9   B3N610   B4HXS7   B4Q6H4   A0A0M4E376   A0A023F7S0   A0A023F740   Q29KE7   Q9V3W2   B4HBZ0   B4NY88   A0A0A1X7J7   A0A0A1XM97   A0A1Y1M2M7   A0A293M241   A0A1D2MW98   R4FMV0   A0A1D2AI60   A0A0K8R9H0   B7QKY7  

Pubmed

23622113    22118469    26354079    22651552    28756777    26227816    + More
24945155    26483478    20920257    23761445    17510324    25244985    24330624    12364791    26369729    18362917    19820115    25315136    25401762    26823975    26108605    17994087    26334808    20075255    18057021    22516182    23537049    28648823    24495485    25348373    22936249    25474469    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    25830018    28004739    27289101   

EMBL

DQ985604    ABJ97192.1    GAIX01013941    JAA78619.1    AGBW02008872    OWR52324.1    + More
KQ460226    KPJ16462.1    AK401800    BAM18422.1    KQ459597    KPI95056.1    ODYU01001155    SOQ36968.1    KZ149992    PZC75560.1    NWSH01000167    PCG78843.1    JTDY01008281    KOB64645.1    GFDF01001849    JAV12235.1    GAPW01005235    JAC08363.1    JXUM01025859    JXUM01025860    KQ560736    KXJ81078.1    ADMH02000386    ETN66750.1    AXCM01005849    GGFL01004510    MBW68688.1    GGFM01002589    MBW23340.1    GGFJ01010062    MBW59203.1    GAMD01001591    JAA99999.1    GGFK01006159    MBW39480.1    GFDL01007508    JAV27537.1    NEVH01007828    PNF35118.1    AJVK01003818    AJVK01003819    DS231817    EDS39659.1    CH477551    EAT39112.1    GALA01000686    JAA94166.1    AAAB01008980    EAA14545.3    AXCN02000750    APCN01005735    AJWK01011153    AJWK01011154    GDAI01001319    JAI16284.1    GANO01004669    JAB55202.1    KQ971372    EFA10794.1    GFDG01001592    JAV17207.1    GALX01001944    JAB66522.1    GBHO01000481    GBRD01002986    GDHC01003181    JAG43123.1    JAG62835.1    JAQ15448.1    JXJN01026161    UFQS01000101    UFQT01000101    SSW99589.1    SSX19969.1    JRES01000175    KNC33592.1    CCAG010015652    GEDC01010972    JAS26326.1    CH933807    EDW11709.1    LNIX01000066    OXA37049.1    CH963920    EDW77954.1    GFTR01002703    JAW13723.1    GBGD01003280    JAC85609.1    AAZX01001009    GBHO01036794    JAG06810.1    KK854064    PTY10553.1    CH940654    EDW57875.1    KRF77996.1    CH902620    EDV30680.1    KPU72988.1    GECL01002913    JAP03211.1    GAHY01001425    JAA76085.1    APGK01050136    BT127359    KB741166    KB632257    AEE62321.1    ENN73379.1    ERL90777.1    OUUW01000006    SPP82428.1    NNAY01005063    OXU17051.1    GDHF01009374    GDHF01005539    JAI42940.1    JAI46775.1    CH916372    EDV99051.1    CVRI01000054    CRL00455.1    GAMC01000089    GAMC01000088    JAC06467.1    GAKP01000241    JAC58711.1    GBYB01008576    JAG78343.1    CH954177    EDV58048.1    CH480818    EDW51857.1    CM000361    CM002910    EDX05156.1    KMY90402.1    CP012523    ALC39042.1    ALC40216.1    GBBI01001425    JAC17287.1    GBBI01001657    JAC17055.1    CH379061    EAL33228.2    AE014134    BT001463    AAF53480.1    AAN10909.2    AAN71218.1    CH479272    EDW40001.1    CM000157    EDW89724.1    GBXI01007456    JAD06836.1    GBXI01002599    JAD11693.1    GEZM01041912    GEZM01041911    JAV80102.1    GFWV01010314    MAA35043.1    LJIJ01000461    ODM97228.1    ACPB03028724    GAHY01001584    JAA75926.1    GETE01000866    JAT78880.1    GADI01006087    JAA67721.1    ABJB010660488    DS962636    EEC19509.1   

Proteomes

UP000007151    UP000053240    UP000053268    UP000218220    UP000037510    UP000069940    + More
UP000249989    UP000000673    UP000075883    UP000075920    UP000075900    UP000075884    UP000235965    UP000075885    UP000092462    UP000002320    UP000008820    UP000076408    UP000075881    UP000075903    UP000075902    UP000007062    UP000076407    UP000095300    UP000075880    UP000075886    UP000075840    UP000069272    UP000092461    UP000007266    UP000092445    UP000095301    UP000078200    UP000092460    UP000037069    UP000092443    UP000092444    UP000192223    UP000009192    UP000198287    UP000007798    UP000002358    UP000008792    UP000091820    UP000007801    UP000019118    UP000030742    UP000268350    UP000215335    UP000001070    UP000183832    UP000192221    UP000008711    UP000001292    UP000000304    UP000092553    UP000001819    UP000000803    UP000008744    UP000002282    UP000094527    UP000015103    UP000001555   

PRIDE

A0FDR2   

Pfam

PF09782   NDUF_B6        + More
PF13405   EF-hand_6
PF13234   rRNA_proc-arch
PF00270   DEAD
PF08148   DSHCT

Interpro

IPR019174   NADH_DH_b-subcmplx_su6        + More
IPR011992   EF-hand-dom_pair       
IPR002048   EF_hand_dom       
IPR018247   EF_Hand_1_Ca_BS       
IPR016438   Ski2-like       
IPR025696   rRNA_proc-arch_dom       
IPR027417   P-loop_NTPase       
IPR012961   Ski2_C       
IPR011545   DEAD/DEAH_box_helicase_dom       
IPR001650   Helicase_C       
IPR014001   Helicase_ATP-bd       

SUPFAM

SSF47473   SSF47473        + More
SSF52540   SSF52540       

CDD

cd00051  EFh
cd00079  HELICc

ProteinModelPortal

A0FDR2   S4NNG4   A0A212FF15   A0A0N1IPM2   I4DKI2   A0A194PNP8   + More
A0A2H1V7Z2   A0A2W1BRZ6   A0A2A4K4Z6   A0A0L7KNJ0   A0A1L8E162   A0A023EG32   A0A182H4X5   W5JUX8   A0A182MHR1   A0A2M4CV22   A0A2M3Z495   A0A2M4C1L4   T1DJ84   A0A2M4AFC2   A0A182WHI5   A0A182RRI5   A0A1Q3FIX2   A0A182NUW8   A0A2J7R2Q2   A0A182P3C2   A0A1B0D6Z1   B0W0C0   Q16WX6   A0A182Y5L0   A0A182JNG2   T1DIX5   A0A182VP76   A0A182UE48   Q7PM07   A0A182XCH4   A0A1I8PPX4   A0A182JH70   A0A182QT19   A0A182ICM9   A0A182F3S7   A0A1B0EX50   A0A0K8TPK0   U5EPQ1   D6X1A2   A0A1L8EEP8   V5GXL2   A0A1A9ZTH3   A0A1I8NGP2   A0A0A9ZHC0   A0A1A9UIT0   A0A1B0AKL7   A0A336K4K4   A0A0L0CN01   A0A1A9YA35   A0A1B0GD88   A0A1B6DKV6   A0A1W4WW49   B4KKX9   A0A226CVU9   B4N019   A0A224XZM4   A0A069DWA7   K7J429   A0A0A9WPN4   A0A2R7VSR6   B4M9J9   A0A1A9X493   B3ML22   A0A0V0G590   R4G4E8   J3JVU1   A0A3B0KFL7   A0A232EFC3   A0A0K8W7F0   B4JQ71   A0A1J1IJN1   W8CBZ4   A0A1W4V387   A0A034WT69   A0A0C9RNB9   B3N610   B4HXS7   B4Q6H4   A0A0M4E376   A0A023F7S0   A0A023F740   Q29KE7   Q9V3W2   B4HBZ0   B4NY88   A0A0A1X7J7   A0A0A1XM97   A0A1Y1M2M7   A0A293M241   A0A1D2MW98   R4FMV0   A0A1D2AI60   A0A0K8R9H0   B7QKY7  

PDB

5LNK     E-value=0.0271263,     Score=82

KEGG

778510    K03962 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 6 | (RefSeq) uncharacterized LOC778

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)

GO

GO:0005747   GO:0006120   GO:0016021   GO:0005509   GO:0003724   GO:0006401   GO:0005524   GO:0003723   GO:0003954  

Length:

160

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

12.28994

Exp number, first 60 AAs:

0

Total prob of N-in:

0.56535

outside

1  -  160

 

 

Pi

128.576367

Theta

114.256506

Tajima's D

0.157699

CLR

0.667788

CSRT

0.414979251037448

Interpretation

Uncertain