SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02935
Annotation
PREDICTED:_probable_dimethyladenosine_transferase_[Amyelois_transitella]
Full name
rRNA adenine N(6)-methyltransferase      
Location in the cell
Cytoplasmic   Reliability : 1.465 Mitochondrial   Reliability : 1.443 Nuclear   Reliability : 1.365
 

Sequence

CDS
ATGCCAAAAATTAAGGCAGAAAAAAAAACGAGAATTCATAAAGAAATTGCTAAACAAGGTATTCAATTTAACAAGGACTTCGGTCAACACATATTGAAGAATCCACTAATAATAACCTCTATGTTAGACAAATCTGGATTAAGGCCTACTGATGTAGCACTTGAGATTGGTCCTGGTACTGGCAATATGACAGTCAAATTGCTGGACAGAGTAAAAAAGGTATTAGCCTGTGAAATTGATACAAGATTGGTTGCTGAACTTCAAAAACGTGTGCAAGGTACTCCTTATCAAGCAAAATTACAAATTTTGGTTGGAGATGTTTTGAAAACAGAATTACCATTTTTTGATATATGTGTAGCAAATATTCCATATCAAATTAGTTCACCTTTAGTGTTCAAATTGCTGCTACACAGACCTTTCTTTAGGTGTGCAGTGCTCATGTTTCAAAAGGAGTTTGCACAGAGATTAGTTGCAAAGCCTGGTGATAAATTGTACTGCAGACTGTCAATAAATACACAATTATTGGCTAGAGTTGATATGCTGATGAAGGTTGGCAAGAACAATTTCAGACCACCACCCAAAGTAGAGTCTAGTGTTGTGAGAATAGAACCAAGAAATCCACCTCCGCCTATAAATTTTGTAGAATGGGATGGTTTGACTAGAATAGCATTTGTAAGAAAAAATAAAACACTCTCAGCTGCATTCAAACATGCAACCACAATGGCTGCTTTGGAGAAAAATTACAGGGTCCATTGTTCTTTACACAATAAGGAAATCCCTGAAGATTTTGATATTAAGCAAAAAGTACATGAAATATTGACATCCTGTGAAGCTGATCAAATGAGGGCTAGAACAATGGATATTGATGACTTTATGAAGCTATTACATGCTTTTAATGCTGAAGGGATTCATTTTGCATAA
Protein
MPKIKAEKKTRIHKEIAKQGIQFNKDFGQHILKNPLIITSMLDKSGLRPTDVALEIGPGTGNMTVKLLDRVKKVLACEIDTRLVAELQKRVQGTPYQAKLQILVGDVLKTELPFFDICVANIPYQISSPLVFKLLLHRPFFRCAVLMFQKEFAQRLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFRPPPKVESSVVRIEPRNPPPPINFVEWDGLTRIAFVRKNKTLSAAFKHATTMAALEKNYRVHCSLHNKEIPEDFDIKQKVHEILTSCEADQMRARTMDIDDFMKLLHAFNAEGIHFA

Summary

Similarity
Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
EC Number
2.1.1.-
EMBL
AGBW02008872    OWR52325.1    KZ149992    PZC75559.1    KQ460226    KPJ16461.1    + More
KQ459597    KPI95055.1    NWSH01000167    PCG78842.1    ODYU01001155    SOQ36969.1    AJVK01029492    AJVK01033907    KK852543    KDR21683.1    PYGN01001603    PSN33798.1    GEBQ01009555    JAT30422.1    GFDF01008385    JAV05699.1    NEVH01012098    PNF30301.1    DS232362    EDS40679.1    GEZM01017357    JAV90755.1    GFDL01013013    JAV22032.1    CH477673    CH477186    EAT37437.1    EAT48949.1    GAPW01002834    JAC10764.1    GAIX01012139    JAA80421.1    KQ434796    KZC05758.1    APGK01028302    BT128352    KB740686    KB631930    AEE63310.1    ENN79543.1    ERL87302.1    UFQT01001439    SSX30582.1    ATLV01011260    KE524659    KFB35980.1    GECU01016680    JAS91026.1    GGFK01011270    MBW44591.1    GGFJ01007741    MBW56882.1    GECZ01002743    JAS67026.1    KU659918    AOG17717.1    GGFJ01007742    MBW56883.1    ADMH02001999    ETN60036.1    KQ971379    EEZ97508.1    AXCN02000234    GBYB01007832    JAG77599.1    GGFM01005287    MBW26038.1    GEDC01025043    JAS12255.1    GGFM01005103    MBW25854.1    GGFK01011271    MBW44592.1    AAAB01008898    EAA09266.2    APCN01005389    GGFM01005143    MBW25894.1    KQ435711    KOX79550.1    KU659994    AOG17792.1    AXCM01000209    CVRI01000045    CRK96936.1    KA648305    AFP62934.1    ADTU01002284    ADTU01002285    KQ976483    KYM83698.1    GL446405    EFN87842.1    KQ978344    KYM94806.1    JRES01000370    KNC31889.1    GAKP01019340    GAKP01019338    JAC39614.1    GAMC01013178    GAMC01013176    JAB93377.1    BX465215    AERX01026878    KZ288340    PBC27783.1    GDHF01026986    GDHF01022583    GDHF01013500    GDHF01003705    JAI25328.1    JAI29731.1    JAI38814.1    JAI48609.1    NNAY01000925    OXU25874.1    KY563977    ASO76385.1    KQ981253    KYN44197.1    CM000070    EAL27808.1    CH479179    EDW24637.1    KY609807    ASO76496.1    AHAT01002686    BT080069    ACO14493.1    GBYX01152068    JAO92314.1    AYCK01007762    BC078286    AAH78286.1    OUUW01000013    SPP88057.1    FR910148    CDQ90095.1    HADW01018709    HADX01009900    SBP20109.1    CP026251    AWP06967.1    CH902617    EDV43931.1    GG666529    EEN58644.1   
Pfam
PF00398   RrnaAD
Interpro
IPR029063   SAM-dependent_MTases        + More
IPR001737   KsgA/Erm       
IPR011530   rRNA_adenine_dimethylase       
IPR020596   rRNA_Ade_Mease_Trfase_CS       
IPR020598   rRNA_Ade_methylase_Trfase_N       
SUPFAM
SSF53335   SSF53335       
PDB
1ZQ9     E-value=3.67765e-120,     Score=1103

Ontologies

Topology

Length:
306
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0535900000000001
Exp number, first 60 AAs:
0.000740000000000001
Total prob of N-in:
0.11026
outside
1  -  306
 
 

Population Genetic Test Statistics

Pi
148.030095
Theta
143.90861
Tajima's D
0.186901
CLR
0.531502
CSRT
0.419979001049948
Interpretation
Uncertain
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