SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02930
Pre Gene Modal
BGIBMGA003555
Annotation
PREDICTED:_alpha/beta_hydrolase_domain-containing_protein_17B_[Papilio_xuthus]
Location in the cell
PlasmaMembrane   Reliability : 2.06
 

Sequence

CDS
ATGAACGGATTAAGTTTCAGCGAACTTTGTTGCCTGTTTTGTTGTCCGCCATGCCCAGGAAAAATTGCGGCCAAGTTAGCATTTCTGCCTCCAGAACCAACGTATGCATTCACTCCTGATGAAACGGGATCGAAATTTTCTTTAACGCTCACAGAACGCGCTGAGTGGCAATACTCAGAACGTGAAAAAGAAAACATCGAAGGCTTCTACTCCAGAACGACGAGGGGCAACAAGATAGCCTGTCTCTTTGTTCGTTGCAGTCCAAATGCTCGTTTCACTATATTGTTCTCACATGGCAACGCTGTGGATCTCGGACAAATGAGCAGTTTTTATTTAGGATTAGGCACCCGAATAAACTGTAATATATTTAGTTATGATTATTCGGGTTATGGTGTAAGTGGCGGGAAGCCCTCAGAAAAGAACTTGTATGCTGACATAGATGCTGCGTGGCAAGCGTTACGAACCCGATATGGCATTAGTCCTGAAAACATTATTTTGTATGGACAAAGCATTGGAACTGTACCAACAGTAGATTTGGCAGTGCGTTATGAAGTTGGAGCTGTAGTGTTACATTCGCCCTTAATGTCCGGAATGCGAGTAGCATTTCCAAACACCAAGAGAACTTGGTTTTTCGATGCATTTCCCAGTATTGACAAAATACCCAAAGTTACTTCTCCAGTTCTTGTGATTCATGGAACCGAGGATGAGGTAATTGACTTCTCCCACGGACTCGCCATATATGAGCGGTGTCCGCGTGCAGTGGAGCCACTATGGGTAGAGGGTGCTGGGCATAACGATGTGGAACTGTTCAATCAGTACCTCGAGAGACTGAAACGTTTTGTATCTGTAGAGTTGCTCAACTGA
Protein
MNGLSFSELCCLFCCPPCPGKIAAKLAFLPPEPTYAFTPDETGSKFSLTLTERAEWQYSEREKENIEGFYSRTTRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIFSYDYSGYGVSGGKPSEKNLYADIDAAWQALRTRYGISPENIILYGQSIGTVPTVDLAVRYEVGAVVLHSPLMSGMRVAFPNTKRTWFFDAFPSIDKIPKVTSPVLVIHGTEDEVIDFSHGLAIYERCPRAVEPLWVEGAGHNDVELFNQYLERLKRFVSVELLN

Summary

EMBL
BABH01007545    KQ460226    KPJ16455.1    ODYU01001580    SOQ37999.1    NWSH01000167    + More
PCG78865.1    JTDY01000391    KOB77398.1    KZ149992    PZC75550.1    AGBW02013358    OWR43534.1    KQ459597    KPI95049.1    GEDC01019075    GEDC01002311    JAS18223.1    JAS34987.1    GECU01018329    JAS89377.1    GEBQ01023898    GEBQ01003562    JAT16079.1    JAT36415.1    GECZ01028157    JAS41612.1    KK852954    KDR13312.1    GGLE01003173    MBY07299.1    GFJQ02004284    JAW02686.1    AAZX01009832    GEFM01003797    JAP71999.1    ABJB011121406    DS833022    EEC12384.1    KQ977900    KYM98932.1    GL888900    EGI57440.1    ADTU01027349    GL450994    EFN80190.1    GACK01005547    JAA59487.1    GL439444    EFN67278.1    MNPL01003745    OQR77282.1    GANP01009652    JAB74816.1    GBBM01001956    JAC33462.1    GBBL01001576    JAC25744.1    GFAC01004859    JAT94329.1    GEDV01002104    JAP86453.1    KK855008    PTY20263.1    GFPF01005931    MAA17077.1    NNAY01000993    OXU25577.1    MWRG01010918    PRD26242.1    KQ971307    EFA11332.1    AK417934    BAN21149.1    GEZM01101429    JAV52656.1    KK107899    QOIP01000006    EZA47272.1    RLU21526.1    KZ288298    PBC28900.1    LBMM01005746    KMQ91237.1    LNIX01000001    OXA64198.1    GBHO01034893    GBHO01034891    GBHO01034890    GBRD01000558    GDHC01020781    GDHC01013480    JAG08711.1    JAG08713.1    JAG08714.1    JAG65263.1    JAP97847.1    JAQ05149.1    KQ981193    KYN45121.1    LJIJ01000020    ODN05596.1    KQ980900    KYN11685.1    NEDP02003864    OWF47552.1    KQ976417    KYM89963.1    JH431009    HACG01016020    CEK62885.1    DS235140    EEB12461.1    GANO01000833    JAB59038.1    CH477258    EAT45797.1    AXCM01001621    GANO01000834    JAB59037.1    JW872845    AFP05363.1    ADMH02000430    ETN66516.1    DS232254    EDS38509.1    GL732525    EFX88874.1    GGFM01004878    MBW25629.1    KQ435794    KOX74041.1    KQ418194    KOF88365.1    GGFJ01007970    MBW57111.1    GDRN01104598    JAI57884.1    AXCM01007190    AAAB01008859    EGK96878.1    GFDL01011459    JAV23586.1    KB202883    ESO87595.1    GFTR01004591    JAW11835.1    AAAB01008849    EAA07221.3    GGFK01012097    MBW45418.1    KQ414628    KOC67350.1    ADMH02000071    ETN67913.1    ACPB03009224    GDIQ01221865    LRGB01000868    JAK29860.1    KZS15469.1    AMQN01002595    KB309617    ELT93806.1    DS232276    EDS38935.1    CH477202    EAT48103.1    GBBI01000185    JAC18527.1    AJVK01003961    AJVK01003962    GDIQ01011341    JAN83396.1    APGK01039129    KB740967    KB632399    ENN76850.1    ERL94661.1    APCN01005143    AFYH01122800    AFYH01122801    AFYH01122802    AFYH01122803    AFYH01122804    AFYH01122805    AFYH01122806    AFYH01122807    AFYH01122808    AFYH01122809   
Pfam
PF12146   Hydrolase_4        + More
PF05677   DUF818
PF12697   Abhydrolase_6
Interpro
IPR022742   Hydrolase_4        + More
IPR029058   AB_hydrolase       
IPR008536   DUF818       
IPR000073   AB_hydrolase_1       
SUPFAM
SSF53474   SSF53474       
Gene 3D
PDB
4RNC     E-value=0.00331275,     Score=94

Ontologies

Topology

Length:
287
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03144
Exp number, first 60 AAs:
0.00319
Total prob of N-in:
0.00621
outside
1  -  287
 
 

Population Genetic Test Statistics

Pi
194.907864
Theta
209.193875
Tajima's D
0.242569
CLR
0.239892
CSRT
0.439878006099695
Interpretation
Uncertain
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