Silkworm Genome Informatics Database

Gene

KWMTBOMO02926

Pre Gene Modal

BGIBMGA003638

Annotation

PREDICTED:_probable_lysine-specific_demethylase_ELF6_[Papilio_xuthus]

Location

Bomo_Chr5(-):14051217-14063055 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 4.25

CDS

ATGAAGACTTTGATAACTGCAAATGAACAAAACTCAATTAAAAAAAGTATTCAAAAACCAAACATTCTCAGGAAGAAATCTACAATTAAACCACAATTACTCAAAACGAATGTAATCGGAGCAAAAGAGCCTGTGAACTCCTTGCCCTGGAAAGACGGCTTGAAGGATGTGTCCAAAAGAAAATTAGAATCACAACCGAAGCAATTACTGTGTAAAGTATCCTACACTCCCAAACATGAAAGTGCAAAAAAATATATAAATCAAGATGTCTCAAGGAGTGAGCAATCTCAGGCACAGCAATTAGAAATTGAATCATCCAGTATAGTGTGTCTATCTGACACAAACATAGAATTTAACAACATTGGACATAATGGAATAAATATAGATTCATTTTTGAATGGAGCTGACAAACACAACACAACATTCACCCTAAGCAACGAACAGGTGAAGGAAGATTGGTGCCTTGATTTGATAAGTAGTAATAAAGGAATAGTTTTAAACACATATAATGGATCTCAGTTAAACTGCGCGGGTACGAATGCAGACCTCATGGGAACAGTTGTGACAACTGCTTTTGTCATGGATCAACAACAAATACAAACAGCGGAGAGCACAACTTCTAGTATTGTTTCAATAGCACAGTCCCCTGAATCGTTTACTAGTCAGGCTATTAAATTTAAGTGTGATATACAAAACTGTAATAAGGGATTCTGGAGTGCAGCTAAATTAATGAAACACAAAAATACCCATAACAAGCAAACAAGATGGTCGGCTCATATCAGCGTTGAGTGTCCAGTTAAGAAGGTCAGGGAAGACGGAATAGAGAGATGCGGGCAAATGTTTGCATCCCGAGAAAGTTTGTTAAAACATTTAAACGAGGATCACCAGCCTGAAGATGCTCCATACAGTTGTGAGGTGTGCGGTCGTCGTTTCTTCTGGTCGGTGGGTCTGCGCGCGCACGCCGGCTCGCGGTGCGGGCGCGGCGCGCTGGTGTGCGCGTGGGCGGGCTGCGGGCGCGAGTTCCGCCAGCCGTGTCGCCTGCGGGAACATCTGCGGGCGCACACTGGCGACCGTCCCTACCATTGCACTCACCCGAACTGCGGATGGTCGTTTCGATCGGCGAGTAAGCTAGAGCGGCACGTCCGCGGCCACACCGGCGAGCGGAAGCACGCGTGTGTGCGATGCGGACGAGCCTTCCTACGCCGAGACCACCTGCGCGACCACGCCGTCCGCTGCCACCCGCACGCGCTCTGCTGCGTGCACGCACATTGCAAAGAAACCTTTTCCGACGCGAGCTCCTTGTGTCTCCATTTAAAAGAAGTCCACGGACAGGACGCAGTTATAGCACGAGCCGAAACGACGAAACAGACTGCGGTGGCCACGAAGCCTCGTCAAAGCGCGTTTGTGGTGAGCCTTATACCAGAAACGGAAAATAACGAACCGTCTGCGGCCGTGGAGACGCTCACTTCGGAAACTGTTGCCGCCGAAGTAGAAACGGAACTTGAAGCAGAAGCGGAAGCGGAAGCAGAAGTTGAAGTGGAAACGGCGCCGGAGGAGGAATCTGAGGAATGGCATGCCGCTAGAACGCACTGCACCTGGCCGCTTCCCAGACACGCTGCTTATGTCTTAGAAGAAGACGCTAGGACTGAGCAGTCGGAGAACTCTGAAAGCAATATCTACACGGTCCGTAGTGATCTATTCCTGCACGGAAATGTACTGATTAACGAGGACAGCGAGTTTATAGTAAGCAGGGAACTGTCGAGCCGCGCCGCTGATGAGGCGGGCTCCGGAATGGATCTCATAGACGCTCACCCGACCATCGATCTCCTGCAGGAGGAACTTATGTACGCTGACGCCGTGGACGAATCATCGTTCAGGGTATTCCTAATGAATGGCGAAGATCTCTCCTAA

Protein

MKTLITANEQNSIKKSIQKPNILRKKSTIKPQLLKTNVIGAKEPVNSLPWKDGLKDVSKRKLESQPKQLLCKVSYTPKHESAKKYINQDVSRSEQSQAQQLEIESSSIVCLSDTNIEFNNIGHNGINIDSFLNGADKHNTTFTLSNEQVKEDWCLDLISSNKGIVLNTYNGSQLNCAGTNADLMGTVVTTAFVMDQQQIQTAESTTSSIVSIAQSPESFTSQAIKFKCDIQNCNKGFWSAAKLMKHKNTHNKQTRWSAHISVECPVKKVREDGIERCGQMFASRESLLKHLNEDHQPEDAPYSCEVCGRRFFWSVGLRAHAGSRCGRGALVCAWAGCGREFRQPCRLREHLRAHTGDRPYHCTHPNCGWSFRSASKLERHVRGHTGERKHACVRCGRAFLRRDHLRDHAVRCHPHALCCVHAHCKETFSDASSLCLHLKEVHGQDAVIARAETTKQTAVATKPRQSAFVVSLIPETENNEPSAAVETLTSETVAAEVETELEAEAEAEAEVEVETAPEEESEEWHAARTHCTWPLPRHAAYVLEEDARTEQSENSESNIYTVRSDLFLHGNVLINEDSEFIVSRELSSRAADEAGSGMDLIDAHPTIDLLQEELMYADAVDESSFRVFLMNGEDLS

Uniprot

A0A2H1VVD1 A0A212EPX2 A0A194PV87 A0A0N1IPV2

Pubmed

22118469 26354079

EMBL

ODYU01004659 SOQ44780.1 AGBW02013358 OWR43538.1 KQ459597 KPI95045.1 + More
KQ460226 KPJ16450.1

Proteomes

UP000007151 UP000053268 UP000053240

Pfam

PF00096 zf-C2H2

Interpro

IPR013087 Znf_C2H2_type + More
IPR036236 Znf_C2H2_sf

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

A0A2H1VVD1 A0A212EPX2 A0A194PV87 A0A0N1IPV2

PDB

2I13 E-value=1.63067e-20, Score=247

KEGG

101744592 no KO assigned | (RefSeq) zinc finger protein 771-like

GO

GO:0003676 GO:0046872 GO:0005737 GO:0016149 GO:0004672 GO:0007169 GO:0016020 GO:0004713 GO:0006281 GO:0048384

Length:

636

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00395

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00119

outside

1 - 636

Pi

189.347886

Theta

182.126842

Tajima's D

0.810824

CLR

0.353184

CSRT

0.6011199440028

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics