Gene

KWMTBOMO02925

Pre Gene Modal

BGIBMGA003553

Annotation

PREDICTED:_protein_rolling_stone-like_[Bombyx_mori]

Location

Bomo_Chr5(+):14032146-14043159      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.882

CDS

ATGGTGAAATTTTATAGGAAAAGTATCACGCACTCGGACTTGTGGGTGACTTCGCATGATAAACTGAGTGATTTCTACGCGTCGTCATGGCAACCTGGAGAAGCACCAGTCCCTCTGTTGGTCATGAGGTTGATACTAGCAAGTGCGGCTCTGGGGATCCTGGTGTGGTCGGTGACCGTATCCCCGACGCCCACATGGCTGGTATTCCTCACTAACTGGGGCCTTGTATTAGTGGCGATGACCACACTGAATGGCCTAGTTTTGTCATGTATCGCTCTATGCAGAAAGAACATGGATGGGGATGGACTACCGTGGTTCGTGAGCACGTATTGGTTCCTATTCAACGTGTCTGTGACCATCGCCATCATGATCACTGCACTCTACTGGATACTTATTTATGATCCAGAACCTGAGGACCCGGAGTCACATGATTTGTGGCTGGATATCGGAACACATGCAGTAAACTCCTTGATTATGTTAGCTGAGCTATTGGCGACGAGGACGCCGATACGATTCCTGCATCTATACCAGCCCTTAGGAATGGGCTTGTGTTACGCGGCCTTCTCGGCCATATACTATGTTGCTGGAGGCACTGTAAACGGCTTCCCATATATCTACGAAGTTTTAGATTGGCGACAAGCGAAGCGAGCAGGCGCCATCGTAGGTGGAGCTGCAGCCGGTGTGATCATCATCTACGCGTTTCTGTGGGGGCTCGCTCTCTGTCGGGACAAGATCTCTACCTCACTCATACGCACCACAAGCCACGATTTAGCTCCCGTACCGCCCGATCGACATATGGCATAA

Protein

MVKFYRKSITHSDLWVTSHDKLSDFYASSWQPGEAPVPLLVMRLILASAALGILVWSVTVSPTPTWLVFLTNWGLVLVAMTTLNGLVLSCIALCRKNMDGDGLPWFVSTYWFLFNVSVTIAIMITALYWILIYDPEPEDPESHDLWLDIGTHAVNSLIMLAELLATRTPIRFLHLYQPLGMGLCYAAFSAIYYVAGGTVNGFPYIYEVLDWRQAKRAGAIVGGAAAGVIIIYAFLWGLALCRDKISTSLIRTTSHDLAPVPPDRHMA

Uniprot

H9J216   A0A2W1BPQ3   A0A2A4JU90   A0A2H1VVB3   A0A0N0PDS5   A0A194PQM7   + More
A0A212EPY3   A0A0N1PGW6   A0A194PPZ8   A0A2A4JU86   A0A0N0PDH4   H9J215   A0A194PP05   A0A2W1BPK7   A0A2H1V2M7   A0A2A4JUA0   A0A2H1V2I5   A0A2A4JVT0   A0A1E1WKN7   A0A212EPX0   A0A2A4JVE8   A0A2W1BMM1   A0A0L7LFH1   A0A0A1WWB7   A0A2W1BKD6   A0A0A1X9A3   A0A164SL92   A0A0P5SMX0   A0A182Y5M5   A0A182RRG8   A0A1E1WUI9   A0A0N8EBI8   A0A0P5N9C3   A0A0P5DRM5   A0A0M3QTJ5   A0A0P5I365   A0A0P5NBT8   A0A2A4JV90   A0A0N8BUM7   D6W7E7   A0A182IPP2   A0A0P5R6P0   A0A1I8NSL9   A0A336MHR5   A0A1I8MB35   A0A182MSD6   A0A182QXJ3   A0A0A1WH74   A0A0P5DF48   A0A0N8C7E1   A0A2W1BUW2   W8BXI1   A0A336MIU4   A0A182GNM4   A0A0M4EQI5   A0A0L0CMJ3   A0A182UZG0   A0A0T6AYG0   A0A1Y9GLK9   A0A182L5X9   A0A0P6B6I5   B4KFB5   A0A1I8NB47   B3MLE0   Q29JS3   A0A0P5NPI4   B4GJ84   A0A3B0JUR8   B4MUK6   A0A0K8TRE5   A0A0K8V861   A0A0L0CMU8   A0A0P6HT35   A0A0P6JLZ9   A0A182F236   A0A0P5M9S9   A0A034VGR5   A0A1Q3FL99   A0A0P6E644   A0A0P5MGU3   A0A1E1WH93   A0A0P5W834   A0A0N1IPM0   B4JZD8   B0WX62   B4LUZ5   A0A0P6ABE7   A0A0P5V9T8   W8B2M2   B4LRZ8   A0A0P5RAP6   A0A0P5GCW8   B4LUZ2   B3MUQ8   A0A084VBZ8   A0A1B6C3D6  

Pubmed

19121390    28756777    26354079    22118469    26227816    25830018    + More
25244985    18362917    19820115    25315136    24495485    26483478    26108605    20966253    17994087    15632085    26369729    25348373    18057021    24438588   

EMBL

BABH01007549    BABH01007550    KZ149992    PZC75545.1    NWSH01000568    PCG75597.1    + More
ODYU01004659    SOQ44781.1    KQ460226    KPJ16449.1    KQ459597    KPI95044.1    AGBW02013358    OWR43539.1    KPJ16447.1    KPI95043.1    PCG75595.1    KPJ16448.1    BABH01007552    BABH01007553    KPI95042.1    PZC75544.1    ODYU01000378    SOQ35059.1    PCG75607.1    SOQ35058.1    PCG75593.1    GDQN01003633    JAT87421.1    OWR43540.1    PCG75594.1    PZC75541.1    JTDY01001287    KOB74293.1    GBXI01010963    JAD03329.1    PZC75542.1    GBXI01007029    JAD07263.1    LRGB01002000    KZS09735.1    GDIP01137749    JAL65965.1    GDQN01000412    JAT90642.1    GDIQ01042964    JAN51773.1    GDIQ01156461    JAK95264.1    GDIP01152786    JAJ70616.1    CP012523    ALC39023.1    GDIQ01218697    JAK33028.1    GDIQ01144696    JAL07030.1    PCG75608.1    GDIQ01143243    JAL08483.1    KQ971307    EFA11216.1    GDIQ01114285    JAL37441.1    UFQS01001311    UFQT01001311    SSX10274.1    SSX29962.1    AXCM01000824    AXCM01000825    AXCN02000753    GBXI01016065    JAC98226.1    GDIP01160754    JAJ62648.1    GDIQ01107531    JAL44195.1    PZC75543.1    GAMC01000485    JAC06071.1    UFQT01000635    SSX25968.1    JXUM01076722    JXUM01076723    JXUM01076724    JXUM01076725    JXUM01076726    KQ562964    KXJ74746.1    ALC39020.1    JRES01000175    KNC33573.1    LJIG01022567    KRT79885.1    APCN01004535    GDIP01019065    JAM84650.1    CH933807    EDW12015.1    CH902620    EDV30729.2    CH379062    EAL32888.2    GDIQ01139594    JAL12132.1    CH479184    EDW37398.1    OUUW01000010    SPP85834.1    CH963857    EDW76201.1    GDAI01001108    JAI16495.1    GDHF01031887    GDHF01017679    GDHF01017273    GDHF01014108    GDHF01002433    JAI20427.1    JAI34635.1    JAI35041.1    JAI38206.1    JAI49881.1    KNC33606.1    GDIQ01068025    GDIQ01030243    JAN64494.1    GDIQ01014512    JAN80225.1    GDIQ01162985    JAK88740.1    GAKP01018234    JAC40718.1    GFDL01006655    JAV28390.1    GDIQ01068024    JAN26713.1    KZS09736.1    GDIQ01158506    JAK93219.1    GDQN01004690    JAT86364.1    GDIP01090016    JAM13699.1    KPJ16446.1    CH916379    EDV94060.1    DS232158    EDS36323.1    CH940649    EDW63244.1    GDIP01031896    JAM71819.1    GDIP01118308    JAL85406.1    GAMC01015267    GAMC01015266    JAB91288.1    EDW63674.2    GDIQ01103407    JAL48319.1    GDIQ01250096    JAK01629.1    EDW63241.1    KRF80986.1    CH902624    EDV32973.1    ATLV01009879    ATLV01009880    KE524552    KFB35492.1    GEDC01029280    JAS08018.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000037510    + More
UP000076858    UP000076408    UP000075900    UP000092553    UP000007266    UP000075880    UP000095300    UP000095301    UP000075883    UP000075886    UP000069940    UP000249989    UP000037069    UP000075903    UP000075840    UP000075882    UP000009192    UP000007801    UP000001819    UP000008744    UP000268350    UP000007798    UP000069272    UP000001070    UP000002320    UP000008792    UP000030765   

PRIDE

H9J216    H9J215   

Pfam

PF04750   Far-17a_AIG1

Interpro

IPR039860   Rost        + More
IPR006838   Far-17a_AIG1       
IPR036259   MFS_trans_sf       

SUPFAM

SSF103473   SSF103473       

ProteinModelPortal

H9J216   A0A2W1BPQ3   A0A2A4JU90   A0A2H1VVB3   A0A0N0PDS5   A0A194PQM7   + More
A0A212EPY3   A0A0N1PGW6   A0A194PPZ8   A0A2A4JU86   A0A0N0PDH4   H9J215   A0A194PP05   A0A2W1BPK7   A0A2H1V2M7   A0A2A4JUA0   A0A2H1V2I5   A0A2A4JVT0   A0A1E1WKN7   A0A212EPX0   A0A2A4JVE8   A0A2W1BMM1   A0A0L7LFH1   A0A0A1WWB7   A0A2W1BKD6   A0A0A1X9A3   A0A164SL92   A0A0P5SMX0   A0A182Y5M5   A0A182RRG8   A0A1E1WUI9   A0A0N8EBI8   A0A0P5N9C3   A0A0P5DRM5   A0A0M3QTJ5   A0A0P5I365   A0A0P5NBT8   A0A2A4JV90   A0A0N8BUM7   D6W7E7   A0A182IPP2   A0A0P5R6P0   A0A1I8NSL9   A0A336MHR5   A0A1I8MB35   A0A182MSD6   A0A182QXJ3   A0A0A1WH74   A0A0P5DF48   A0A0N8C7E1   A0A2W1BUW2   W8BXI1   A0A336MIU4   A0A182GNM4   A0A0M4EQI5   A0A0L0CMJ3   A0A182UZG0   A0A0T6AYG0   A0A1Y9GLK9   A0A182L5X9   A0A0P6B6I5   B4KFB5   A0A1I8NB47   B3MLE0   Q29JS3   A0A0P5NPI4   B4GJ84   A0A3B0JUR8   B4MUK6   A0A0K8TRE5   A0A0K8V861   A0A0L0CMU8   A0A0P6HT35   A0A0P6JLZ9   A0A182F236   A0A0P5M9S9   A0A034VGR5   A0A1Q3FL99   A0A0P6E644   A0A0P5MGU3   A0A1E1WH93   A0A0P5W834   A0A0N1IPM0   B4JZD8   B0WX62   B4LUZ5   A0A0P6ABE7   A0A0P5V9T8   W8B2M2   B4LRZ8   A0A0P5RAP6   A0A0P5GCW8   B4LUZ2   B3MUQ8   A0A084VBZ8   A0A1B6C3D6  

KEGG

101740465    no KO assigned | (RefSeq) protein rolling stone-like

GO

GO:0016021  

PANTHER

PTHR12242:SF1  

Length:

267

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

123.35603

Exp number, first 60 AAs:

20.67758

Total prob of N-in:

0.99249

POSSIBLE N-term signal

sequence

inside

1  -  38

TMhelix

39  -  61

outside

62  -  65

TMhelix

66  -  88

inside

89  -  108

TMhelix

109  -  131

outside

132  -  145

TMhelix

146  -  165

inside

166  -  171

TMhelix

172  -  194

outside

195  -  217

TMhelix

218  -  240

inside

241  -  267

 

 

Pi

247.830792

Theta

210.931476

Tajima's D

0.431641

CLR

1090.372241

CSRT

0.489175541222939

Interpretation

Uncertain