Gene

KWMTBOMO02924

Pre Gene Modal

BGIBMGA003552

Annotation

Protein_rolling_stone_[Papilio_xuthus]

Location

Bomo_Chr5(+):14017566-14019319      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.793

CDS

ATGAACGACAAATTCGGTTACTGGTTCATTTATCTCACACATTGGGGCCTCACGATCAACACTCTGGCGACGGGTTTTGCAACTGCTGTTTCTGCACGTTGCTACTTCTACGGACCAATTAGCGCTGAATTCAAACTACCGTGGTATGTCAAGGTTTCCTGGGTACTCTACAACATTGCCGTACCACTCGCATTCCTGATCACAATTTTCTATTGGTCTTTACTTTTTGAGGCTGGAATTGAAGAAGAGTTAAACCACGCCTTGGATGTGGCCATCCACGGTATCAACTCCTTGGTAATGTTCATGTTGATGTCGAGCTCTTTGCACCCAAGTCGCTTACTACACATTTATCAACCCTTAACCTTCTCCGTGGTTTATGTCACCTTCGGGATTATATACTACTTCGCTGGTGGGGTTGAACAAGAAGGAAACCCTTGGATTTATCCGGTAGTGAATTGGGCCAACCCTGGACCCACTGTCGGGGTTGTGGCTTTGACTGGACTACTTCTGGTCATATTGCACTCAGTAACAGTGGCGTTTTCCGTTGGCCGAGACAAACTCTCTAAAAAGTTCCTTAATGCCACATCACCAAACGTACCTGAGGAGGTGCCTCTGCGGCAGCCTACACTAACTCCAACAGCAACAGTACAACTAAATGACAGCTGA

Protein

MNDKFGYWFIYLTHWGLTINTLATGFATAVSARCYFYGPISAEFKLPWYVKVSWVLYNIAVPLAFLITIFYWSLLFEAGIEEELNHALDVAIHGINSLVMFMLMSSSLHPSRLLHIYQPLTFSVVYVTFGIIYYFAGGVEQEGNPWIYPVVNWANPGPTVGVVALTGLLLVILHSVTVAFSVGRDKLSKKFLNATSPNVPEEVPLRQPTLTPTATVQLNDS

Uniprot

H9J215   A0A194PPZ8   A0A2A4JU86   A0A0N0PDH4   A0A1E1WH93   A0A212EPX0   + More
A0A2A4JUA0   A0A0L7LFH1   A0A2H1V2M7   A0A0N1PGW6   A0A2A4JVE8   A0A1E1WUI9   A0A2W1BUW2   A0A2W1BMM1   A0A194PP05   A0A2W1BKD6   A0A0N1IPM0   A0A2A4JV90   A0A2H1V2I5   A0A2A4JVT0   A0A0N0PDS5   A0A194PQM7   A0A2A4JU90   A0A212EPW8   A0A212EPY3   A0A2W1BPQ3   A0A182QXJ3   A0A182F236   A0A2H1VVB3   A0A182Y5M5   A0A182IPP2   A0A1Q3FL99   A0A1Y1N4E4   A0A1Y1N4B9   A0A182MSD6   A0A182UZG0   A0A1Y9GLK9   A0A182L5X9   A0A1W4WQF2   A0A182RRG8   B0WX62   H9J216   A0A0M4EQI5   A0A1B6C3D6   A0A182GNM4   A0A336MIU4   B4NXK9   Q16S04   D6W7E7   B4HYT5   B3N7V9   B4Q7C1   A0A182XCJ4   B3MUQ8   Q9VLG1   A0A1B0CZ86   A0A1W4VZN2   B4MUK6   A0A1B6JNH2   B4LUZ2   Q29JS3   A0A0R3P206   A0A1L8D9A3   A0A3B0JUR8   B4GJ84   A0A1L8D935   S4PPR9   A0A1I8NB47   B4JZD8   A0A182WHK1   A0A2W1BKH1   W8B2M2   U4UNE7   N6U5I2   B4KFB2   W5JPB6   A0A0A1WH74   A0A182PB14  

Pubmed

19121390    26354079    22118469    26227816    28756777    25244985    + More
28004739    20966253    26483478    17994087    17550304    17510324    18362917    19820115    18057021    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    23622113    25315136    24495485    23537049    20920257    23761445    25830018   

EMBL

BABH01007552    BABH01007553    KQ459597    KPI95043.1    NWSH01000568    PCG75595.1    + More
KQ460226    KPJ16448.1    GDQN01004690    JAT86364.1    AGBW02013358    OWR43540.1    PCG75607.1    JTDY01001287    KOB74293.1    ODYU01000378    SOQ35059.1    KPJ16447.1    PCG75594.1    GDQN01000412    JAT90642.1    KZ149992    PZC75543.1    PZC75541.1    KPI95042.1    PZC75542.1    KPJ16446.1    PCG75608.1    SOQ35058.1    PCG75593.1    KPJ16449.1    KPI95044.1    PCG75597.1    OWR43542.1    OWR43539.1    PZC75545.1    AXCN02000753    ODYU01004659    SOQ44781.1    GFDL01006655    JAV28390.1    GEZM01013099    JAV92752.1    GEZM01013100    JAV92751.1    AXCM01000824    AXCM01000825    APCN01004535    DS232158    EDS36323.1    BABH01007549    BABH01007550    CP012523    ALC39020.1    GEDC01029280    JAS08018.1    JXUM01076722    JXUM01076723    JXUM01076724    JXUM01076725    JXUM01076726    KQ562964    KXJ74746.1    UFQT01000635    SSX25968.1    CM000157    EDW88600.1    KRJ97932.1    CH477692    EAT37204.1    EAT37205.1    KQ971307    EFA11216.1    CH480818    EDW52215.1    CH954177    EDV58320.1    KQS70361.1    CM000361    CM002910    EDX04315.1    KMY89194.1    CH902624    EDV32973.1    AE014134    AY069364    AAF52731.1    AAL39509.1    AAN10684.1    AJVK01002126    CH963857    EDW76201.1    GECU01022043    GECU01006981    JAS85663.1    JAT00726.1    CH940649    EDW63241.1    KRF80986.1    CH379062    EAL32888.2    KRT05046.1    GFDF01011046    JAV03038.1    OUUW01000010    SPP85834.1    CH479184    EDW37398.1    GFDF01011234    JAV02850.1    GAIX01000062    JAA92498.1    CH916379    EDV94060.1    PZC75539.1    GAMC01015267    GAMC01015266    JAB91288.1    KB632399    ERL94647.1    APGK01039147    KB740967    ENN76865.1    CH933807    EDW12012.2    ADMH02000487    ETN66232.1    GBXI01016065    JAC98226.1   

Proteomes

UP000005204    UP000053268    UP000218220    UP000053240    UP000007151    UP000037510    + More
UP000075886    UP000069272    UP000076408    UP000075880    UP000075883    UP000075903    UP000075840    UP000075882    UP000192223    UP000075900    UP000002320    UP000092553    UP000069940    UP000249989    UP000002282    UP000008820    UP000007266    UP000001292    UP000008711    UP000000304    UP000076407    UP000007801    UP000000803    UP000092462    UP000192221    UP000007798    UP000008792    UP000001819    UP000268350    UP000008744    UP000095301    UP000001070    UP000075920    UP000030742    UP000019118    UP000009192    UP000000673    UP000075885   

PRIDE

H9J215    H9J216    Q9VLG1   

Pfam

PF04750   Far-17a_AIG1

Interpro

IPR006838   Far-17a_AIG1        + More
IPR039860   Rost       
IPR036259   MFS_trans_sf       

SUPFAM

SSF103473   SSF103473       

ProteinModelPortal

H9J215   A0A194PPZ8   A0A2A4JU86   A0A0N0PDH4   A0A1E1WH93   A0A212EPX0   + More
A0A2A4JUA0   A0A0L7LFH1   A0A2H1V2M7   A0A0N1PGW6   A0A2A4JVE8   A0A1E1WUI9   A0A2W1BUW2   A0A2W1BMM1   A0A194PP05   A0A2W1BKD6   A0A0N1IPM0   A0A2A4JV90   A0A2H1V2I5   A0A2A4JVT0   A0A0N0PDS5   A0A194PQM7   A0A2A4JU90   A0A212EPW8   A0A212EPY3   A0A2W1BPQ3   A0A182QXJ3   A0A182F236   A0A2H1VVB3   A0A182Y5M5   A0A182IPP2   A0A1Q3FL99   A0A1Y1N4E4   A0A1Y1N4B9   A0A182MSD6   A0A182UZG0   A0A1Y9GLK9   A0A182L5X9   A0A1W4WQF2   A0A182RRG8   B0WX62   H9J216   A0A0M4EQI5   A0A1B6C3D6   A0A182GNM4   A0A336MIU4   B4NXK9   Q16S04   D6W7E7   B4HYT5   B3N7V9   B4Q7C1   A0A182XCJ4   B3MUQ8   Q9VLG1   A0A1B0CZ86   A0A1W4VZN2   B4MUK6   A0A1B6JNH2   B4LUZ2   Q29JS3   A0A0R3P206   A0A1L8D9A3   A0A3B0JUR8   B4GJ84   A0A1L8D935   S4PPR9   A0A1I8NB47   B4JZD8   A0A182WHK1   A0A2W1BKH1   W8B2M2   U4UNE7   N6U5I2   B4KFB2   W5JPB6   A0A0A1WH74   A0A182PB14  

KEGG

101746117    no KO assigned | (RefSeq) protein rolling stone-like

GO

GO:0016021   GO:0006415   GO:0005737   GO:0016149   GO:0004672   GO:0007169   GO:0016020   GO:0004713   GO:0006281   GO:0048384  

PANTHER

PTHR12242:SF1  

Length:

221

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

108.49503

Exp number, first 60 AAs:

30.38847

Total prob of N-in:

0.10123

POSSIBLE N-term signal

sequence

outside

1  -  9

TMhelix

10  -  32

inside

33  -  52

TMhelix

53  -  75

outside

76  -  89

TMhelix

90  -  109

inside

110  -  115

TMhelix

116  -  138

outside

139  -  157

TMhelix

158  -  180

inside

181  -  221

 

 

Pi

281.543324

Theta

205.721417

Tajima's D

1.153044

CLR

0.005205

CSRT

0.694315284235788

Interpretation

Uncertain