Gene

KWMTBOMO02923

Pre Gene Modal

BGIBMGA003552

Annotation

PREDICTED:_protein_rolling_stone-like_[Amyelois_transitella]

Location

Bomo_Chr5(+):14008686-14013808      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.91

CDS

ATGACTTTCGGGTACTGGACAATATATTTAACTCATTGGGGAATTATTCTAATTACAATCACGTCGGGAGCGGCCCTCGCAGTTTCTTTGGTATCATTAAAAACTGGATGTATAGAAGCATCATTTGTACTACCGTGGTACGTGAAAGCGTACTGGGTGTGCTTCAATATCACAGTTCCTATTGCGTTTTTTATCACGATATTCTACTGGAGCTTACTGACCAAAACAGAAGATGAATATGCTATGGATCCGATTCTAGACGTGTTCATCCATGCTGTTAATGCGATCCTGATGTTAGTTCTACTAATGTTCTCTCGTCATCCTGTACGATGTCTACATTTCCACCATCCGCTATTGCTCGGAGTCGTATATCTCATCTTCAGCATTGTTTATTACTACGCTGGCGGAACTAATCCCTTTGGTGAGCCGTATGTGTACCCGATGCTGGACTGGTCGAATCCTGGGGTGGCTGCCATTACAACTGTGGGCTCGGCAATATTTATCATCATAGTACACATCATAATTGTTCTCTTGTCAGTTGCAAGGGACAGCCTTACAAGACGTTTCACGAAGTACCCACACTCATTGGACATATCTAATGACCTATACCATTAA

Protein

MTFGYWTIYLTHWGIILITITSGAALAVSLVSLKTGCIEASFVLPWYVKAYWVCFNITVPIAFFITIFYWSLLTKTEDEYAMDPILDVFIHAVNAILMLVLLMFSRHPVRCLHFHHPLLLGVVYLIFSIVYYYAGGTNPFGEPYVYPMLDWSNPGVAAITTVGSAIFIIIVHIIIVLLSVARDSLTRRFTKYPHSLDISNDLYH

Uniprot

A0A1E1WUI9   A0A2A4JVE8   A0A2W1BUW2   A0A0N1PGW6   A0A2A4JUA0   A0A2H1V2M7   + More
A0A2H1V2I5   A0A2A4JV90   A0A0L7LFH1   A0A194PP05   A0A2W1BMM1   A0A2A4JU86   A0A212EPX0   A0A2A4JVT0   A0A194PPZ8   A0A2W1BKD6   A0A0N1IPM0   A0A0N0PDH4   A0A1E1WH93   A0A212EQ06   A0A194PNN2   A0A212EPW8   A0A0N0PDS5   A0A212EPY3   A0A194PQM7   H9J216   A0A1W4WQF2   A0A2W1BPQ3   A0A182F236   A0A182MSD6   A0A2A4JU90   A0A0A1WWB7   A0A182QXJ3   W8BXI1   A0A0A1X9A3   A0A182Y5M5   A0A182UZG0   A0A1Y9GLK9   A0A182L5X9   A0A1L8D9A3   A0A182IPP2   A0A182RRG8   A0A1L8D935   A0A2H1VVB3   A0A1Q3FL99   A0A1I8P1F6   A0A1B0CZ86   B0WX62   A0A1Y1N4E4   A0A1Y1N4B9   D6W7E7   Q16S04   A0A1I8N097   A0A1B6C3D6   K1Q5N2   A0A182GNM4   A0A2H1V2K1   A0A2W1BKH1   A0A034W4U6   A0A0T6AYG0   A0A1I8PR73   A0A0L0CQ92   A0A2A4JV12   A0A0L0CMJ3   A0A0K8TRE5   A0A212F2Q7   A0A1W4VZN2   B3MUQ8   B4KFB4   B5DKA8   D6QYP2   B4GJ86   D6QYP8   B4NXK9   A0A336MIU4   A7SMX4   A0A1B0FKK2   A0A0A1WSZ7   A0A1B6JNH2   C3YTA7   V4AHJ2   B4JZD6   A0A1I8MB35   A0A1A9XWS7   A0A1B0BP37   D6QYR0   A0A3B0JUP9   A0A1I8PM89   A0A1A9ZHP5   B3N7V9  

Pubmed

28756777    26354079    26227816    22118469    19121390    25830018    + More
24495485    25244985    20966253    28004739    18362917    19820115    17510324    25315136    22992520    26483478    25348373    26108605    26369729    17994087    15632085    20351054    17550304    17615350    18563158    23254933    18057021   

EMBL

GDQN01000412    JAT90642.1    NWSH01000568    PCG75594.1    KZ149992    PZC75543.1    + More
KQ460226    KPJ16447.1    PCG75607.1    ODYU01000378    SOQ35059.1    SOQ35058.1    PCG75608.1    JTDY01001287    KOB74293.1    KQ459597    KPI95042.1    PZC75541.1    PCG75595.1    AGBW02013358    OWR43540.1    PCG75593.1    KPI95043.1    PZC75542.1    KPJ16446.1    KPJ16448.1    GDQN01004690    JAT86364.1    OWR43541.1    KPI95041.1    OWR43542.1    KPJ16449.1    OWR43539.1    KPI95044.1    BABH01007549    BABH01007550    PZC75545.1    AXCM01000824    AXCM01000825    PCG75597.1    GBXI01010963    JAD03329.1    AXCN02000753    GAMC01000485    JAC06071.1    GBXI01007029    JAD07263.1    APCN01004535    GFDF01011046    JAV03038.1    GFDF01011234    JAV02850.1    ODYU01004659    SOQ44781.1    GFDL01006655    JAV28390.1    AJVK01002126    DS232158    EDS36323.1    GEZM01013099    JAV92752.1    GEZM01013100    JAV92751.1    KQ971307    EFA11216.1    CH477692    EAT37204.1    EAT37205.1    GEDC01029280    JAS08018.1    JH817548    EKC29218.1    JXUM01076722    JXUM01076723    JXUM01076724    JXUM01076725    JXUM01076726    KQ562964    KXJ74746.1    SOQ35061.1    PZC75539.1    GAKP01008336    JAC50616.1    LJIG01022567    KRT79885.1    JRES01000175    KNC33609.1    PCG75606.1    KNC33573.1    GDAI01001108    JAI16495.1    AGBW02010703    OWR48003.1    CH902624    EDV32973.1    CH933807    EDW12014.1    CH379062    EDY70734.1    HM017711    HM017712    HM017713    HM017714    HM017715    HM017716    HM017718    HM017719    HM017720    HM017721    ADG65062.1    ADG65063.1    ADG65064.1    ADG65065.1    ADG65066.1    ADG65067.1    ADG65069.1    ADG65070.1    ADG65071.1    ADG65072.1    CH479184    EDW37400.1    HM017717    ADG65068.1    CM000157    EDW88600.1    KRJ97932.1    UFQT01000635    SSX25968.1    DS469714    EDO34937.1    CCAG010008391    GBXI01012325    JAD01967.1    GECU01022043    GECU01006981    JAS85663.1    JAT00726.1    GG666551    EEN56474.1    KB199981    ESP03529.1    CH916379    EDV94058.1    JXJN01017803    HM017729    ADG65080.1    OUUW01000010    SPP85837.1    CH954177    EDV58320.1    KQS70361.1   

Proteomes

UP000218220    UP000053240    UP000037510    UP000053268    UP000007151    UP000005204    + More
UP000192223    UP000069272    UP000075883    UP000075886    UP000076408    UP000075903    UP000075840    UP000075882    UP000075880    UP000075900    UP000095300    UP000092462    UP000002320    UP000007266    UP000008820    UP000095301    UP000005408    UP000069940    UP000249989    UP000037069    UP000192221    UP000007801    UP000009192    UP000001819    UP000008744    UP000002282    UP000001593    UP000092444    UP000001554    UP000030746    UP000001070    UP000092443    UP000092460    UP000268350    UP000092445    UP000008711   

PRIDE

H9J216   

Pfam

PF04750   Far-17a_AIG1

Interpro

IPR039860   Rost        + More
IPR036259   MFS_trans_sf       
IPR006838   Far-17a_AIG1       

SUPFAM

SSF103473   SSF103473       

ProteinModelPortal

A0A1E1WUI9   A0A2A4JVE8   A0A2W1BUW2   A0A0N1PGW6   A0A2A4JUA0   A0A2H1V2M7   + More
A0A2H1V2I5   A0A2A4JV90   A0A0L7LFH1   A0A194PP05   A0A2W1BMM1   A0A2A4JU86   A0A212EPX0   A0A2A4JVT0   A0A194PPZ8   A0A2W1BKD6   A0A0N1IPM0   A0A0N0PDH4   A0A1E1WH93   A0A212EQ06   A0A194PNN2   A0A212EPW8   A0A0N0PDS5   A0A212EPY3   A0A194PQM7   H9J216   A0A1W4WQF2   A0A2W1BPQ3   A0A182F236   A0A182MSD6   A0A2A4JU90   A0A0A1WWB7   A0A182QXJ3   W8BXI1   A0A0A1X9A3   A0A182Y5M5   A0A182UZG0   A0A1Y9GLK9   A0A182L5X9   A0A1L8D9A3   A0A182IPP2   A0A182RRG8   A0A1L8D935   A0A2H1VVB3   A0A1Q3FL99   A0A1I8P1F6   A0A1B0CZ86   B0WX62   A0A1Y1N4E4   A0A1Y1N4B9   D6W7E7   Q16S04   A0A1I8N097   A0A1B6C3D6   K1Q5N2   A0A182GNM4   A0A2H1V2K1   A0A2W1BKH1   A0A034W4U6   A0A0T6AYG0   A0A1I8PR73   A0A0L0CQ92   A0A2A4JV12   A0A0L0CMJ3   A0A0K8TRE5   A0A212F2Q7   A0A1W4VZN2   B3MUQ8   B4KFB4   B5DKA8   D6QYP2   B4GJ86   D6QYP8   B4NXK9   A0A336MIU4   A7SMX4   A0A1B0FKK2   A0A0A1WSZ7   A0A1B6JNH2   C3YTA7   V4AHJ2   B4JZD6   A0A1I8MB35   A0A1A9XWS7   A0A1B0BP37   D6QYR0   A0A3B0JUP9   A0A1I8PM89   A0A1A9ZHP5   B3N7V9  

KEGG

101746260    no KO assigned | (RefSeq) protein rolling stone-like

GO

GO:0016021   GO:0007520  

PANTHER

PTHR12242:SF1  

Length:

204

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

109.10826

Exp number, first 60 AAs:

32.32696

Total prob of N-in:

0.00170

POSSIBLE N-term signal

sequence

outside

1  -  9

TMhelix

10  -  32

inside

33  -  50

TMhelix

51  -  73

outside

74  -  87

TMhelix

88  -  105

inside

106  -  111

TMhelix

112  -  134

outside

135  -  155

TMhelix

156  -  178

inside

179  -  204

 

 

Pi

231.242171

Theta

160.932183

Tajima's D

1.504633

CLR

0.000893

CSRT

0.787960601969901

Interpretation

Uncertain