Gene

KWMTBOMO02922

Annotation

PREDICTED:_protein_rolling_stone-like_isoform_X3_[Papilio_xuthus]

Location

Bomo_Chr5(+):13985576-14004097      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.973

CDS

ATGATCAAATACACATGGAAACACGGATTGTACTGCATCTCGGCATTTCTGGGATCGGAAGATGAATCCGTCGAGATCTTTACGAAATCCAGCTTGGGAAGCATTTCCCCTTTGTTATGGAGGATACCAATATTCTTGTGGGCAACCATCTCACTTTTCATGTCGATGAATTATTTCTGGGGGCCCACGAAGCTATTCTTTGTGTATATGACACATTGGGGTCTGTTATTCATCGTCCTGGAATCTATGTTCGGTATCATCGTAGTACTAAGGAAACGCGGAAGACCAGACGCTACATTTGGCTTGCCTTGGTATGTAAAAACGTACTGGGTCCTCTACAATATTTCAATCCCGGTCGCCTTTCTCATTACTGTGTTCTATTGGGGAATATTAAAATCATCATTGGACACAGTGAAGTTCTCACCGAATCCTGTGCTGGACGTAATGATTCACGGCGTGAACTCCGTTGTAATGTTCGTTGAGCTGATGTTCTCGGCGCATCCCAGTAGACTGCTACACATCATGCAACCGCTGTACTTCGCCGGAGCCTACATGCTATTCTCTGTCACTTATTATTTCGCTGGTGGATTAGATCCCTGGGGGAACAAATTCATCTATCCAGTGATAGACTGGTCAAAGCCAGATCAAACGATGGTTGTAATTACCCTCACGGCTATATTCCTTGCCTTAATGCATCTCATCACCGTGGCAATGGCGGCTGCTCGGGACTCCATTACGAAACAATGTAAACCAGATCCAACAGGAGTTTACAATGATGGATTCGAACCCTAA

Protein

MIKYTWKHGLYCISAFLGSEDESVEIFTKSSLGSISPLLWRIPIFLWATISLFMSMNYFWGPTKLFFVYMTHWGLLFIVLESMFGIIVVLRKRGRPDATFGLPWYVKTYWVLYNISIPVAFLITVFYWGILKSSLDTVKFSPNPVLDVMIHGVNSVVMFVELMFSAHPSRLLHIMQPLYFAGAYMLFSVTYYFAGGLDPWGNKFIYPVIDWSKPDQTMVVITLTAIFLALMHLITVAMAAARDSITKQCKPDPTGVYNDGFEP

Uniprot

A0A2W1BMM1   A0A0N1IPM0   A0A2A4JUA0   A0A2H1V2M7   A0A0L7LFH1   A0A194PNN2   + More
A0A212EPX0   H9J215   A0A194PPZ8   A0A1E1WUI9   A0A2A4JVE8   A0A2A4JU86   A0A1E1WH93   A0A0N0PDH4   A0A2W1BKD6   A0A2A4JV90   A0A2A4JVT0   A0A0N1PGW6   A0A194PP05   A0A212EPY3   A0A182RRG8   A0A182Y5M5   A0A182MSD6   A0A1Y9GLK9   A0A182L5X9   A0A182UZG0   A0A182F236   A0A194PQM7   A0A182IPP2   A0A182QXJ3   A0A2A4JU90   A0A0N0PDS5   A0A2W1BPQ3   A0A336MIU4   A0A0L0CMJ3   A0A1I8P1F6   D6W7E7   A0A1B6C3D6   A0A212EQ06   H9J216   N6U5I2   U4UNE7   A0A1W4VZN2   B4JZD6   B4MUK6   B4Q7C1   B4HYT5   A0A1W4WQF2   Q9VLG1   B3N7V9   B4NXK9   A0A2H1V2K1   A0A1S3H9V7   A0A0K8TRE5   A0A2W1BKH1   B4JZD8   A0A1B6JNH2   A0A3B0JUR8   A0A0C9QXI8   A0A0R3P206   A0A0C9PVD2   Q29JS3   A0A1Y1N4B9   B4LUZ2   A0A1Y1N4E4   A0A026WND4   A0A212F2Q7   A0A1A9UJM3   A0A1A9YBQ8   A0A0M4EQI5   A0A3L8DHS8   A0A1B0AQ44   A0A1I8N097   B4LUZ4   B4JAV0   A0A0M4EBX1   B4GJ84   A0A1I8NDS0  

Pubmed

28756777    26354079    26227816    22118469    19121390    25244985    + More
20966253    26108605    18362917    19820115    23537049    17994087    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    18057021    17550304    26369729    15632085    28004739    24508170    30249741    25315136   

EMBL

KZ149992    PZC75541.1    KQ460226    KPJ16446.1    NWSH01000568    PCG75607.1    + More
ODYU01000378    SOQ35059.1    JTDY01001287    KOB74293.1    KQ459597    KPI95041.1    AGBW02013358    OWR43540.1    BABH01007552    BABH01007553    KPI95043.1    GDQN01000412    JAT90642.1    PCG75594.1    PCG75595.1    GDQN01004690    JAT86364.1    KPJ16448.1    PZC75542.1    PCG75608.1    PCG75593.1    KPJ16447.1    KPI95042.1    OWR43539.1    AXCM01000824    AXCM01000825    APCN01004535    KPI95044.1    AXCN02000753    PCG75597.1    KPJ16449.1    PZC75545.1    UFQT01000635    SSX25968.1    JRES01000175    KNC33573.1    KQ971307    EFA11216.1    GEDC01029280    JAS08018.1    OWR43541.1    BABH01007549    BABH01007550    APGK01039147    KB740967    ENN76865.1    KB632399    ERL94647.1    CH916379    EDV94058.1    CH963857    EDW76201.1    CM000361    CM002910    EDX04315.1    KMY89194.1    CH480818    EDW52215.1    AE014134    AY069364    AAF52731.1    AAL39509.1    AAN10684.1    CH954177    EDV58320.1    KQS70361.1    CM000157    EDW88600.1    KRJ97932.1    SOQ35061.1    GDAI01001108    JAI16495.1    PZC75539.1    EDV94060.1    GECU01022043    GECU01006981    JAS85663.1    JAT00726.1    OUUW01000010    SPP85834.1    GBYB01005387    JAG75154.1    CH379062    KRT05046.1    GBYB01005388    JAG75155.1    EAL32888.2    GEZM01013100    JAV92751.1    CH940649    EDW63241.1    KRF80986.1    GEZM01013099    JAV92752.1    KK107152    EZA57146.1    AGBW02010703    OWR48003.1    CP012523    ALC39020.1    QOIP01000007    RLU20005.1    JXJN01001669    EDW63243.1    CH916368    EDW02820.1    ALC39022.1    CH479184    EDW37398.1   

Proteomes

UP000053240    UP000218220    UP000037510    UP000053268    UP000007151    UP000005204    + More
UP000075900    UP000076408    UP000075883    UP000075840    UP000075882    UP000075903    UP000069272    UP000075880    UP000075886    UP000037069    UP000095300    UP000007266    UP000019118    UP000030742    UP000192221    UP000001070    UP000007798    UP000000304    UP000001292    UP000192223    UP000000803    UP000008711    UP000002282    UP000085678    UP000268350    UP000001819    UP000008792    UP000053097    UP000078200    UP000092443    UP000092553    UP000279307    UP000092460    UP000095301    UP000008744   

PRIDE

H9J215    H9J216    Q9VLG1   

Pfam

PF04750   Far-17a_AIG1

Interpro

IPR039860   Rost        + More
IPR006838   Far-17a_AIG1       
IPR036259   MFS_trans_sf       

SUPFAM

SSF103473   SSF103473       

ProteinModelPortal

A0A2W1BMM1   A0A0N1IPM0   A0A2A4JUA0   A0A2H1V2M7   A0A0L7LFH1   A0A194PNN2   + More
A0A212EPX0   H9J215   A0A194PPZ8   A0A1E1WUI9   A0A2A4JVE8   A0A2A4JU86   A0A1E1WH93   A0A0N0PDH4   A0A2W1BKD6   A0A2A4JV90   A0A2A4JVT0   A0A0N1PGW6   A0A194PP05   A0A212EPY3   A0A182RRG8   A0A182Y5M5   A0A182MSD6   A0A1Y9GLK9   A0A182L5X9   A0A182UZG0   A0A182F236   A0A194PQM7   A0A182IPP2   A0A182QXJ3   A0A2A4JU90   A0A0N0PDS5   A0A2W1BPQ3   A0A336MIU4   A0A0L0CMJ3   A0A1I8P1F6   D6W7E7   A0A1B6C3D6   A0A212EQ06   H9J216   N6U5I2   U4UNE7   A0A1W4VZN2   B4JZD6   B4MUK6   B4Q7C1   B4HYT5   A0A1W4WQF2   Q9VLG1   B3N7V9   B4NXK9   A0A2H1V2K1   A0A1S3H9V7   A0A0K8TRE5   A0A2W1BKH1   B4JZD8   A0A1B6JNH2   A0A3B0JUR8   A0A0C9QXI8   A0A0R3P206   A0A0C9PVD2   Q29JS3   A0A1Y1N4B9   B4LUZ2   A0A1Y1N4E4   A0A026WND4   A0A212F2Q7   A0A1A9UJM3   A0A1A9YBQ8   A0A0M4EQI5   A0A3L8DHS8   A0A1B0AQ44   A0A1I8N097   B4LUZ4   B4JAV0   A0A0M4EBX1   B4GJ84   A0A1I8NDS0  

KEGG

101740602    no KO assigned | (RefSeq) protein rolling stone-like

GO

GO:0016021   GO:0007520  

PANTHER

PTHR12242:SF1  

Length:

263

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

128.98299

Exp number, first 60 AAs:

21.64409

Total prob of N-in:

0.97704

POSSIBLE N-term signal

sequence

inside

1  -  37

TMhelix

38  -  60

outside

61  -  69

TMhelix

70  -  89

inside

90  -  108

TMhelix

109  -  131

outside

132  -  145

TMhelix

146  -  165

inside

166  -  177

TMhelix

178  -  197

outside

198  -  216

TMhelix

217  -  239

inside

240  -  263

 

 

Pi

230.464915

Theta

169.222531

Tajima's D

0.737759

CLR

0.661924

CSRT

0.587270636468177

Interpretation

Uncertain