Gene

KWMTBOMO02921

Pre Gene Modal

BGIBMGA003551

Annotation

PREDICTED:_protein_rolling_stone_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr5(+):13953336-13981558      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.076

CDS

ATGCAGAAGTCTTGCAAACCAGCGATGCTTGGCCGCATGTGGCAAGCCAGTAGCCGAGCTTTTAGCTTGGATCATTGGCCTTCTCATCGCTTTGGCTGTTGCCAGTGGCAGAAGAGGCAACAACCTTCCAAATACTATATTCTGTACAGGTGGATAATATTTATTGCGGTATTGGCCATTAACATTGCGAGTTTTGCTTGTCAGCGCATCCCAGTGAAGTATCACGGACTGAAAGTGGAACTAAATTACTTTAAATGGTTCATTTACCTCACTAATTGGGGATTTATGCTGATAGCTGTTCAAGCAGCTCTCGCACTTGGCGTCGTGTACTACTATAAAAACGACAGGAATCTTAATCTAACTTACGATGAAGATGATGTTCCTGTACCGATGTCTCGTCGTAAACGTACCCCAATTTTGTGCCGCGTGTATTGGCTCACACAAAACGTCGCTACAGACCTCGCCTTCGTCATCTCTCTTGTTTACTGGGCCCTAGTGTATGACCCTGAAATCCATGAAATAAATGCAATAAATCTTCTTGTTCATGGTGGAAATTCCGCGATCATGTTGTGTGAGCTGGCTGTCACAGCACACCCCATTAGGATGGCTCATGCAATGTACGGCGCCGGAGCAGGTCTTGCTTATGGACTCTTCAGTGCATTTTACTGGGCAGTAGGGGGCACGGACAGACTTGGACAGGCTGCTATATATCCCACCCTGGATTGGAATAAACCAGCCGCTGCATTTGGCTTCGTCGCTCTGTGTGCTGTGGTGCTGGTGATGGCTCACGGCGTCGCGACCTGCCTAGCCGTAGTCCGTTTGCGTCTCGCCAAGCGCCTGTACGCAAAACGCGCGCAATCCGACAGACTCACCCTACCGACACATTGA

Protein

MQKSCKPAMLGRMWQASSRAFSLDHWPSHRFGCCQWQKRQQPSKYYILYRWIIFIAVLAINIASFACQRIPVKYHGLKVELNYFKWFIYLTNWGFMLIAVQAALALGVVYYYKNDRNLNLTYDEDDVPVPMSRRKRTPILCRVYWLTQNVATDLAFVISLVYWALVYDPEIHEINAINLLVHGGNSAIMLCELAVTAHPIRMAHAMYGAGAGLAYGLFSAFYWAVGGTDRLGQAAIYPTLDWNKPAAAFGFVALCAVVLVMAHGVATCLAVVRLRLAKRLYAKRAQSDRLTLPTH

Uniprot

H9J214   S4PPR9   A0A2A4JV12   A0A2W1BKH1   A0A194PV82   A0A0N1I933   + More
A0A2H1V2K1   A0A212F2Q7   W8C1X8   A0A1B0A9N6   A0A1B0FBW6   A0A034VS26   A0A1A9WBX3   Q9VK03   A0A0J9R1S4   A0A0P8XHF7   A0A1I8PM89   A0A1B0AQ44   A0A1A9YBQ8   A0A1A9UJM3   A0A0Q9XDS7   M9PFU0   B4M982   B3NAY7   A0A1W4UUU2   B4P347   A0A1B6C3D6   A0A3B0KH96   A0A1I8NDS0   Q29JZ5   A0A1B6LQ50   A0A1L8D6R2   B0W430   Q17A74   A0A182QD39   A0A182NUY8   A0A182F235   A0A182RRG7   A0A336MP41   A0A182PB16   A0A182IWF9   A0A182Y5M6   A0A182WHK3   A0A1B6JNH2   A0A0Q9WQ80   A0A182L5X6   A0A182VF07   A0A182XCJ6   A0A182IDX6   A0A1B0CA98   A0A1W4WQF2   A0A2J7PJ37   A0A182TE01   A0A2J7PJ65   A0A182MUK6   A0A1J1HRB6   A0A067QSW7   A0A3B0KC43   A0A1Y1N4E4   A0A2P8ZHD3   A0A1Y1N4B9   D6W7E7   A0A0T6AYG0   A0A067RT92   A0A1B6FLK0   A0A026WND4   A0A232F2K5   A0A3L8DHS8   A0A069DS34   A0A087ZZV6   A0A0K8TRE5   A0A0A9WND3   A0A1B0CZ86   V9IHR3   A0A0A1WH74   A0A182Y5M5   A0A0J7KQI2   A0A0L0CMU8   E9IZQ9   A0A182QXJ3   A0A1L8D935   A0A034VGR5   A0A0K8V861   A0A2A4JVE8   A0A336MHR5   A0A0L7R1V2   A0A182RRG8   W8B2M2   A0A336MKK2   E2BCM1   A0A154P335   T1HR70   B0WX62   A0A0N0BDM5   A0A151X135   A0A1Q3FL99  

Pubmed

19121390    23622113    28756777    26354079    22118469    24495485    + More
25348373    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    22936249    17994087    17550304    25315136    15632085    17510324    25244985    20966253    24845553    28004739    29403074    18362917    19820115    24508170    28648823    30249741    26334808    26369729    25401762    25830018    26108605    21282665    20798317   

EMBL

BABH01007556    BABH01007557    GAIX01000062    JAA92498.1    NWSH01000568    PCG75606.1    + More
KZ149992    PZC75539.1    KQ459597    KPI95040.1    KQ460226    KPJ16445.1    ODYU01000378    SOQ35061.1    AGBW02010703    OWR48003.1    GAMC01000733    JAC05823.1    CCAG010008775    GAKP01013713    JAC45239.1    AE014134    AAF53281.2    CM002910    KMY90071.1    CH902624    KPU74317.1    JXJN01001669    CH933807    KRG02770.1    AGB92977.1    CH940654    EDW57758.2    CH954177    EDV58701.2    CM000157    EDW88289.2    GEDC01029280    JAS08018.1    OUUW01000010    SPP85759.1    CH379062    EAL32816.3    GEBQ01014185    JAT25792.1    GFDF01011945    JAV02139.1    DS231834    EDS32623.1    CH477339    EAT43152.1    AXCN02000753    UFQS01000861    UFQT01000861    SSX07346.1    SSX27688.1    GECU01022043    GECU01006981    JAS85663.1    JAT00726.1    CH963857    KRF98387.1    APCN01004535    APCN01004536    AJWK01003455    NEVH01024950    PNF16352.1    PNF16353.1    AXCM01010803    CVRI01000020    CRK90565.1    KK853579    KDR06548.1    SPP85760.1    GEZM01013099    JAV92752.1    PYGN01000057    PSN55912.1    GEZM01013100    JAV92751.1    KQ971307    EFA11216.1    LJIG01022567    KRT79885.1    KK852476    KDR23039.1    GECZ01018693    JAS51076.1    KK107152    EZA57146.1    NNAY01001145    OXU24994.1    QOIP01000007    RLU20005.1    GBGD01002353    JAC86536.1    GDAI01001108    JAI16495.1    GBHO01035616    JAG07988.1    AJVK01002126    JR048399    AEY60653.1    GBXI01016065    JAC98226.1    LBMM01004285    KMQ92607.1    JRES01000175    KNC33606.1    GL767232    EFZ13941.1    GFDF01011234    JAV02850.1    GAKP01018234    JAC40718.1    GDHF01031887    GDHF01017679    GDHF01017273    GDHF01014108    GDHF01002433    JAI20427.1    JAI34635.1    JAI35041.1    JAI38206.1    JAI49881.1    PCG75594.1    UFQS01001311    UFQT01001311    SSX10274.1    SSX29962.1    KQ414667    KOC64771.1    GAMC01015267    GAMC01015266    JAB91288.1    UFQS01001098    UFQT01001098    SSX08996.1    SSX28907.1    GL447336    EFN86531.1    KQ434809    KZC06281.1    ACPB03024223    DS232158    EDS36323.1    KQ435863    KOX70314.1    KQ982603    KYQ53947.1    GFDL01006655    JAV28390.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000092445    + More
UP000092444    UP000091820    UP000000803    UP000007801    UP000095300    UP000092460    UP000092443    UP000078200    UP000009192    UP000008792    UP000008711    UP000192221    UP000002282    UP000268350    UP000095301    UP000001819    UP000002320    UP000008820    UP000075886    UP000075884    UP000069272    UP000075900    UP000075885    UP000075880    UP000076408    UP000075920    UP000007798    UP000075882    UP000075903    UP000076407    UP000075840    UP000092461    UP000192223    UP000235965    UP000075902    UP000075883    UP000183832    UP000027135    UP000245037    UP000007266    UP000053097    UP000215335    UP000279307    UP000005203    UP000092462    UP000036403    UP000037069    UP000053825    UP000008237    UP000076502    UP000015103    UP000053105    UP000075809   

PRIDE

H9J214    Q9VK03    M9PFU0   

Interpro

IPR039860   Rost       

ProteinModelPortal

H9J214   S4PPR9   A0A2A4JV12   A0A2W1BKH1   A0A194PV82   A0A0N1I933   + More
A0A2H1V2K1   A0A212F2Q7   W8C1X8   A0A1B0A9N6   A0A1B0FBW6   A0A034VS26   A0A1A9WBX3   Q9VK03   A0A0J9R1S4   A0A0P8XHF7   A0A1I8PM89   A0A1B0AQ44   A0A1A9YBQ8   A0A1A9UJM3   A0A0Q9XDS7   M9PFU0   B4M982   B3NAY7   A0A1W4UUU2   B4P347   A0A1B6C3D6   A0A3B0KH96   A0A1I8NDS0   Q29JZ5   A0A1B6LQ50   A0A1L8D6R2   B0W430   Q17A74   A0A182QD39   A0A182NUY8   A0A182F235   A0A182RRG7   A0A336MP41   A0A182PB16   A0A182IWF9   A0A182Y5M6   A0A182WHK3   A0A1B6JNH2   A0A0Q9WQ80   A0A182L5X6   A0A182VF07   A0A182XCJ6   A0A182IDX6   A0A1B0CA98   A0A1W4WQF2   A0A2J7PJ37   A0A182TE01   A0A2J7PJ65   A0A182MUK6   A0A1J1HRB6   A0A067QSW7   A0A3B0KC43   A0A1Y1N4E4   A0A2P8ZHD3   A0A1Y1N4B9   D6W7E7   A0A0T6AYG0   A0A067RT92   A0A1B6FLK0   A0A026WND4   A0A232F2K5   A0A3L8DHS8   A0A069DS34   A0A087ZZV6   A0A0K8TRE5   A0A0A9WND3   A0A1B0CZ86   V9IHR3   A0A0A1WH74   A0A182Y5M5   A0A0J7KQI2   A0A0L0CMU8   E9IZQ9   A0A182QXJ3   A0A1L8D935   A0A034VGR5   A0A0K8V861   A0A2A4JVE8   A0A336MHR5   A0A0L7R1V2   A0A182RRG8   W8B2M2   A0A336MKK2   E2BCM1   A0A154P335   T1HR70   B0WX62   A0A0N0BDM5   A0A151X135   A0A1Q3FL99  

KEGG

101746399    no KO assigned | (RefSeq) protein rolling stone

GO

GO:0016021   GO:0016020  

PANTHER

PTHR12242:SF1  

Length:

295

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

132.69935

Exp number, first 60 AAs:

14.33523

Total prob of N-in:

0.99815

POSSIBLE N-term signal

sequence

inside

1  -  46

TMhelix

47  -  66

outside

67  -  85

TMhelix

86  -  108

inside

109  -  143

TMhelix

144  -  166

outside

167  -  175

TMhelix

176  -  198

inside

199  -  204

TMhelix

205  -  227

outside

228  -  246

TMhelix

247  -  269

inside

270  -  295

 

 

Pi

255.979031

Theta

198.535472

Tajima's D

0.859305

CLR

0.267812

CSRT

0.620668966551672

Interpretation

Uncertain