Gene

KWMTBOMO02919

Annotation

PREDICTED:_voltage-dependent_calcium_channel_subunit_alpha-2/delta-3_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr5(-):13883754-13890376      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.756

CDS

ATGCAGGCTCTGGTATATGATGCCAGAAACACAGCATGGTTCAATAAGAGTATTTCGGATTCGGCTTCCGATGAAAAAGCGTCTGAGTTCATTCAGCGTTTTGGATACATCGTGGCATTTCTGTCAACTCACAGCGGATTGACCCGATGGCAAACTCATCCGCCGAGGGAGCAGGATAACGTTAGGGCTGAATTCGGAAAGCAATGGCCCCGTTCGATAGATGAAGTGTGGTATCGACGCGCAGTCGAGCAACATTACGTGGATCCCCTCAGCTACGTTTACAGCGTTGAAATAAACACAGATAAGTTTCCGTTGAATATCAGTAATGCTGTTGTAACTGCTTCTCATGCGGTGTTCCACGGAGACGGCTACAAGAAAGCGCCAGCAGCCGTAGTCGGGTTCCAGTTCAAGCACGAACGTCTTAGCGAGTGGTTTGAGAATATAACTTCGTCGTGTGAGCACAACAAGGAATGCGTGACTTGTCTCTCGGACACCTGGGACTGTTACCTCGTCGATAACAACGGTTGGATCGTCGTCAGCGAGGATGTTACACAAAATGGCCAATTCTTTGGAAGGGCAACGACCGCCTTGCTTTGCTTTACAATGAGTGCTACGAAATATGTGCTGTAA

Protein

MQALVYDARNTAWFNKSISDSASDEKASEFIQRFGYIVAFLSTHSGLTRWQTHPPREQDNVRAEFGKQWPRSIDEVWYRRAVEQHYVDPLSYVYSVEINTDKFPLNISNAVVTASHAVFHGDGYKKAPAAVVGFQFKHERLSEWFENITSSCEHNKECVTCLSDTWDCYLVDNNGWIVVSEDVTQNGQFFGRATTALLCFTMSATKYVL

Uniprot

A0A2W1BPP2   A0A2A4JW43   A0A2A4JVU0   A0A2H1W0S0   A0A212F2P3   A0A194PP00   + More
A0A0N1IFN0   H9J2A3   S4PWA1   A0A0L7LAP2   A0A1B0CCX0   A0A182LW46   A0A182KBT7   A0A1Y1M4X1   A0A182SSK7   Q7Q758   A0A3B0J4C4   A0A1A9YNL2   A0A3B0JNP0   B4QEH4   A0A182UDJ5   A0A139WGS5   A0A182UNW2   A0A182LJL0   A0A182PN76   A0A1S4GQ08   A0A182HM33   Q95R75   A0A182XIL0   A0A182QGK0   A0A182Y0W5   A0A084W2X5   B4HQW7   A0A182NM79   W5J6G9   A0A0Q5VMW2   A0A0R1DWW0   B4P469   A0A0Q5VMU8   A0A0R1DPV7   A0A0Q5VUW3   A0A0J9RC37   Q28XX9   A0A182J7M5   B3NRH4   N6WCF7   A0A0J9RD72   A0A182RN46   Q7K0H4   A0A0Q5VNY3   A0A0B4K7P4   A0A0Q9X2P9   B4N5V0   B4GH70   A0A1W4V4S8   A0A1W4VH47   A0A1W4VHY6   A0A182WKA1   A0A0P8ZRP9   B3MHE1   A0A0L0CQA0   A0A0P8Y6U5   A0A1B6MJM2   V9ILR0   E9IZQ6   A0A2A3EQI3   A0A3B0JFZ0   A0A1J1HY10   A0A0B5EIM5   A0A1I8QDT3   A0A154P370   A0A1I8QDV5   A0A1I8QDU9   A0A1I8QDZ2   A0A1I8QDU6   A0A0J7L4P1   E2AL65   A0A0A9X9K6   A0A0R3NPE0   N6W6G2   E2BCL9   A0A1B6IMJ4   A0A0B4K866   A0A0J9RC14   A0A151X0S3   A0A0Q9X480   A0A1W4V4S3   A0A0K8USG4   A0A1W4V4B9   A0A0K8VZ34   A0A0Q9W3E8   A0A1W4VGK1   A0A0Q9WEY5   A0A0Q9W3C2   A0A0Q9WEB3   A0A1W4VH43   A0A0Q9W3Q6   A0A0K8U1W5   A0A0Q9WF22   B0WES9  

Pubmed

28756777    22118469    26354079    19121390    23622113    26227816    + More
28004739    12364791    17994087    18362917    19820115    20966253    25244985    24438588    20920257    23761445    17550304    22936249    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26108605    21282665    20798317    25401762   

EMBL

KZ149992    PZC75535.1    NWSH01000568    PCG75602.1    PCG75603.1    ODYU01005348    + More
SOQ46104.1    AGBW02010703    OWR48004.1    KQ459597    KPI95037.1    KQ460226    KPJ16443.1    BABH01007564    BABH01007565    GAIX01007148    JAA85412.1    JTDY01001946    KOB72469.1    AJWK01007163    AJWK01007164    AXCM01011171    GEZM01041950    JAV80088.1    AAAB01008960    EAA10906.4    OUUW01000001    SPP74262.1    SPP74261.1    CM000362    EDX06964.1    KQ971345    KYB27055.1    APCN01004331    APCN01004332    AY061583    AAL29131.1    AXCN02000940    ATLV01019720    KE525278    KFB44569.1    CH480816    EDW47764.1    ADMH02002072    ETN59596.1    CH954179    KQS62710.1    CM000158    KRJ99302.1    EDW90579.2    KQS62711.1    KRJ99303.1    KQS62709.1    CM002911    KMY93563.1    CM000071    EAL26187.3    EDV56126.2    ENO01819.1    KMY93564.1    AE013599    AY069830    AAF58335.2    AAL39975.1    KQS62708.1    AFH08058.1    CH964154    KRF99110.1    EDW79739.1    CH479183    EDW35840.1    CH902619    KPU77119.1    EDV37941.1    JRES01000080    KNC34362.1    KPU77120.1    GEBQ01003928    JAT36049.1    JR051907    AEY61587.1    GL767232    EFZ13976.1    KZ288194    PBC33967.1    SPP74260.1    CVRI01000036    CRK92984.1    KJ485707    AJE70859.1    KQ434809    KZC06283.1    LBMM01000796    KMQ97474.1    GL440492    EFN65820.1    GBHO01028111    JAG15493.1    KRT02903.1    ENO01818.1    GL447336    EFN86529.1    GECU01019559    JAS88147.1    AFH08057.1    KMY93562.1    KQ982603    KYQ53949.1    KRF99111.1    GDHF01022793    JAI29521.1    GDHF01008205    JAI44109.1    CH940648    KRF79596.1    KRF79595.1    KRF79594.1    KRF79599.1    KRF79597.1    GDHF01031612    GDHF01016000    JAI20702.1    JAI36314.1    KRF79598.1    DS231911    EDS45842.1   

Proteomes

UP000218220    UP000007151    UP000053268    UP000053240    UP000005204    UP000037510    + More
UP000092461    UP000075883    UP000075881    UP000075901    UP000007062    UP000268350    UP000092443    UP000000304    UP000075902    UP000007266    UP000075903    UP000075882    UP000075885    UP000075840    UP000076407    UP000075886    UP000076408    UP000030765    UP000001292    UP000075884    UP000000673    UP000008711    UP000002282    UP000001819    UP000075880    UP000075900    UP000000803    UP000007798    UP000008744    UP000192221    UP000075920    UP000007801    UP000037069    UP000242457    UP000183832    UP000095300    UP000076502    UP000036403    UP000000311    UP000008237    UP000075809    UP000008792    UP000002320   

PRIDE

H9J2A3    Q95R75    Q7K0H4   

Pfam

PF02743   dCache_1        + More
PF08399   VWA_N
PF00092   VWA
PF08473   VGCC_alpha2
PF13519   VWA_2
PF13768   VWA_3

Interpro

IPR036465   vWFA_dom_sf        + More
IPR033479   dCache_1       
IPR013608   VWA_N       
IPR002035   VWF_A       
IPR013680   VDCC_a2/dsu       

SUPFAM

SSF53300   SSF53300       

Gene 3D

3.40.50.410    

ProteinModelPortal

A0A2W1BPP2   A0A2A4JW43   A0A2A4JVU0   A0A2H1W0S0   A0A212F2P3   A0A194PP00   + More
A0A0N1IFN0   H9J2A3   S4PWA1   A0A0L7LAP2   A0A1B0CCX0   A0A182LW46   A0A182KBT7   A0A1Y1M4X1   A0A182SSK7   Q7Q758   A0A3B0J4C4   A0A1A9YNL2   A0A3B0JNP0   B4QEH4   A0A182UDJ5   A0A139WGS5   A0A182UNW2   A0A182LJL0   A0A182PN76   A0A1S4GQ08   A0A182HM33   Q95R75   A0A182XIL0   A0A182QGK0   A0A182Y0W5   A0A084W2X5   B4HQW7   A0A182NM79   W5J6G9   A0A0Q5VMW2   A0A0R1DWW0   B4P469   A0A0Q5VMU8   A0A0R1DPV7   A0A0Q5VUW3   A0A0J9RC37   Q28XX9   A0A182J7M5   B3NRH4   N6WCF7   A0A0J9RD72   A0A182RN46   Q7K0H4   A0A0Q5VNY3   A0A0B4K7P4   A0A0Q9X2P9   B4N5V0   B4GH70   A0A1W4V4S8   A0A1W4VH47   A0A1W4VHY6   A0A182WKA1   A0A0P8ZRP9   B3MHE1   A0A0L0CQA0   A0A0P8Y6U5   A0A1B6MJM2   V9ILR0   E9IZQ6   A0A2A3EQI3   A0A3B0JFZ0   A0A1J1HY10   A0A0B5EIM5   A0A1I8QDT3   A0A154P370   A0A1I8QDV5   A0A1I8QDU9   A0A1I8QDZ2   A0A1I8QDU6   A0A0J7L4P1   E2AL65   A0A0A9X9K6   A0A0R3NPE0   N6W6G2   E2BCL9   A0A1B6IMJ4   A0A0B4K866   A0A0J9RC14   A0A151X0S3   A0A0Q9X480   A0A1W4V4S3   A0A0K8USG4   A0A1W4V4B9   A0A0K8VZ34   A0A0Q9W3E8   A0A1W4VGK1   A0A0Q9WEY5   A0A0Q9W3C2   A0A0Q9WEB3   A0A1W4VH43   A0A0Q9W3Q6   A0A0K8U1W5   A0A0Q9WF22   B0WES9  

KEGG

101746672    K04860 voltage-dependent calcium channel alpha-2/delta-3 | (RefSeq) voltage-dependent calcium channe

GO

GO:0016021   GO:0005891   GO:0005245   GO:0045886   GO:0007274   GO:0097352   GO:0007528   GO:0048786   GO:0050965   GO:0045202   GO:0150008   GO:0006816  

Length:

209

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.14179

Exp number, first 60 AAs:

0.0637

Total prob of N-in:

0.19857

outside

1  -  209

 

 

Pi

263.528947

Theta

183.052307

Tajima's D

2.315646

CLR

0.380179

CSRT

0.925153742312884

Interpretation

Uncertain