Gene

KWMTBOMO02918

Pre Gene Modal

BGIBMGA003640

Annotation

PREDICTED:_voltage-dependent_calcium_channel_subunit_alpha-2/delta-3_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr5(-):13878082-13883086      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.423 PlasmaMembrane   Reliability : 1.771

CDS

ATGACGAAGCTGGTCGAAGACGAAGTTTACAAAGCCGTGCATATTGTGGACTATCAAGCTGTCTGCTTCCGAGAAAAGAAAACCACGAATCCTGCTTCAAAATTGATGACGCCGTTGCACAATTTTAAGATCATAACGTCATGGTTTGTGTCTACAACTTTATGGTTTTACAATTCGATCGCTTTAAGTCTCGCTCAAGCCTCCAGCTACTCTTTCGACGATGTTGCATATCAGAGTTACGAGAACGATGAAGAAAATGACGACTCTTACATGTCGAAACCGACGAATATGCGAACTTTAGAGAGGGACTTCGAGAAATTGGTGTTGATCAACAGAACCAGACCGACGCCTTGCGATAGAGAAATGTTCCTTTACCAACTCGAGTACAGCAATTTGGACGCGAAATTAAACAAGCCAGTTAAAGACTGCGAAAGGCCGTTTTACGCTCAGCTTGTGAACTATACGAATATGCTTATGATAGTTGTCGATGCGAGCTGCCCTAGAGAAGAAGCGTCTATGTCTTTTATAGAAGCGACTGAAGTCCAATACAATGAATCGTTGCCATGCTTAAAACATGTGCATCCTCTTTACAGAAAACAACCTACGTCGTGTATCAAGAACCACACAGAAGAAAGCAACATCGACATGTGCGGCAGAGGATCCCTTCCGAGCTCTAATTTTTTTTGGATAATATTTAGCACTTTCGTCACATATCATCATTTATAA

Protein

MTKLVEDEVYKAVHIVDYQAVCFREKKTTNPASKLMTPLHNFKIITSWFVSTTLWFYNSIALSLAQASSYSFDDVAYQSYENDEENDDSYMSKPTNMRTLERDFEKLVLINRTRPTPCDREMFLYQLEYSNLDAKLNKPVKDCERPFYAQLVNYTNMLMIVVDASCPREEASMSFIEATEVQYNESLPCLKHVHPLYRKQPTSCIKNHTEESNIDMCGRGSLPSSNFFWIIFSTFVTYHHL

Uniprot

H9J2A3   A0A2A4JW43   A0A0N1IFN0   A0A194PP00   A0A2A4JVU0   A0A2H1W0S0   + More
A0A212F2P3   A0A0L7LAP2   A0A2W1BPP2   A0A2J7PJ48   A0A2J7PJ67   A0A067RGR1   A0A1B0DG24   V9ILR0   A0A0L7R1P7   A0A2A3EQI3   A0A088A0C5   A0A0B5EIM5   A0A154P370   A0A1B0CCX0   A0A0J7L4P1   B0WES9   A0A1B6FG29   B4J582   A0A0Q9X2P9   A0A0Q9X480   B4N5V0   A0A195FRY6   A0A0R3NPE0   N6WCF7   N6W6G2   Q28XX9   A0A158NIY1   A0A3B0J4C4   A0A3B0JFZ0   A0A3B0JNP0   B4KPX3   A0A151J7L7   B4LKL2   A0A0Q9W3E8   A0A0Q9W3B9   A0A0Q9W3C2   A0A0Q9WEB3   A0A084W2X5   A0A0Q9W3Q6   A0A0Q9WEY5   A0A0Q9WF22   A0A139WGS5   A0A182SSK7   A0A182WKA1   A0A182LW46   F4WDF0   A0A0A9X450   A0A0M8ZSY5   A0A182HDT3   A0A182RN46   A0A0M3QUP3   A0A182GRW2   A0A232F3G9   A0A182Y0W5   A0A0L0CQA0   A0A182J7M5   A0A1W4V4S8   A0A182KBT7   A0A1W4V4B9   A0A1W4V4S3   A0A1W4VGK1   A0A1W4VHY6   A0A1W4VH47   A0A1W4VH43   E2BCL9   A0A1A9VAS9   A0A1B0B944   A0A1A9WG45   K7IUL2   A0A1A9YNL2   A0A182QGK0   Q7Q758   A0A1W4XCA0   A0A182NM79   B4QEH4   A0A182FF05   A0A1S4GQ08   A0A182TYM3   A0A2S2NJZ9   A0A2P8XJG8   Q95R75   A0A182PN76   A0A2S2NF37   A0A0A9X9K6   B4HQW7   A0A0J9RC37   A0A0J9RD72   A0A0J9RC14   Q7K0H4   A0A0B4K7P4   A0A0B4K866  

Pubmed

19121390    26354079    22118469    26227816    28756777    24845553    + More
17994087    15632085    21347285    24438588    18362917    19820115    21719571    25401762    26483478    28648823    25244985    26108605    20798317    20075255    12364791    29403074    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356   

EMBL

BABH01007564    BABH01007565    NWSH01000568    PCG75602.1    KQ460226    KPJ16443.1    + More
KQ459597    KPI95037.1    PCG75603.1    ODYU01005348    SOQ46104.1    AGBW02010703    OWR48004.1    JTDY01001946    KOB72469.1    KZ149992    PZC75535.1    NEVH01024950    PNF16365.1    PNF16364.1    KK852476    KDR23041.1    AJVK01059198    JR051907    AEY61587.1    KQ414667    KOC64769.1    KZ288194    PBC33967.1    KJ485707    AJE70859.1    KQ434809    KZC06283.1    AJWK01007163    AJWK01007164    LBMM01000796    KMQ97474.1    DS231911    EDS45842.1    GECZ01020846    JAS48923.1    CH916367    EDW00708.1    CH964154    KRF99110.1    KRF99111.1    EDW79739.1    KQ981285    KYN43191.1    CM000071    KRT02903.1    ENO01819.1    ENO01818.1    EAL26187.3    ADTU01017101    ADTU01017102    ADTU01017103    OUUW01000001    SPP74262.1    SPP74260.1    SPP74261.1    CH933808    EDW10250.2    KQ979695    KYN19721.1    CH940648    EDW60733.1    KRF79596.1    KRF79593.1    KRF79594.1    KRF79599.1    ATLV01019720    KE525278    KFB44569.1    KRF79597.1    KRF79595.1    KRF79598.1    KQ971345    KYB27055.1    AXCM01011171    GL888087    EGI67730.1    GBHO01028112    JAG15492.1    KQ435863    KOX70317.1    JXUM01034796    JXUM01034797    JXUM01034798    KQ561036    KXJ79946.1    CP012524    ALC41019.1    JXUM01083390    KQ563373    KXJ73955.1    NNAY01001145    OXU24993.1    JRES01000080    KNC34362.1    GL447336    EFN86529.1    JXJN01010269    JXJN01010270    AAZX01002632    AXCN02000940    AAAB01008960    EAA10906.4    CM000362    EDX06964.1    GGMR01004868    MBY17487.1    PYGN01001920    PSN32143.1    AY061583    AAL29131.1    GGMR01003158    MBY15777.1    GBHO01028111    JAG15493.1    CH480816    EDW47764.1    CM002911    KMY93563.1    KMY93564.1    KMY93562.1    AE013599    AY069830    AAF58335.2    AAL39975.1    AFH08058.1    AFH08057.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000037510    + More
UP000235965    UP000027135    UP000092462    UP000053825    UP000242457    UP000005203    UP000076502    UP000092461    UP000036403    UP000002320    UP000001070    UP000007798    UP000078541    UP000001819    UP000005205    UP000268350    UP000009192    UP000078492    UP000008792    UP000030765    UP000007266    UP000075901    UP000075920    UP000075883    UP000007755    UP000053105    UP000069940    UP000249989    UP000075900    UP000092553    UP000215335    UP000076408    UP000037069    UP000075880    UP000192221    UP000075881    UP000008237    UP000078200    UP000092460    UP000091820    UP000002358    UP000092443    UP000075886    UP000007062    UP000192223    UP000075884    UP000000304    UP000069272    UP000075902    UP000245037    UP000075885    UP000001292    UP000000803   

PRIDE

H9J2A3    Q95R75    Q7K0H4   

Pfam

PF13519   VWA_2        + More
PF02743   dCache_1
PF08399   VWA_N
PF08473   VGCC_alpha2
PF00092   VWA
PF13768   VWA_3

Interpro

IPR013680   VDCC_a2/dsu        + More
IPR002035   VWF_A       
IPR033479   dCache_1       
IPR013608   VWA_N       
IPR036465   vWFA_dom_sf       

SUPFAM

SSF53300   SSF53300       

Gene 3D

3.40.50.410    

ProteinModelPortal

H9J2A3   A0A2A4JW43   A0A0N1IFN0   A0A194PP00   A0A2A4JVU0   A0A2H1W0S0   + More
A0A212F2P3   A0A0L7LAP2   A0A2W1BPP2   A0A2J7PJ48   A0A2J7PJ67   A0A067RGR1   A0A1B0DG24   V9ILR0   A0A0L7R1P7   A0A2A3EQI3   A0A088A0C5   A0A0B5EIM5   A0A154P370   A0A1B0CCX0   A0A0J7L4P1   B0WES9   A0A1B6FG29   B4J582   A0A0Q9X2P9   A0A0Q9X480   B4N5V0   A0A195FRY6   A0A0R3NPE0   N6WCF7   N6W6G2   Q28XX9   A0A158NIY1   A0A3B0J4C4   A0A3B0JFZ0   A0A3B0JNP0   B4KPX3   A0A151J7L7   B4LKL2   A0A0Q9W3E8   A0A0Q9W3B9   A0A0Q9W3C2   A0A0Q9WEB3   A0A084W2X5   A0A0Q9W3Q6   A0A0Q9WEY5   A0A0Q9WF22   A0A139WGS5   A0A182SSK7   A0A182WKA1   A0A182LW46   F4WDF0   A0A0A9X450   A0A0M8ZSY5   A0A182HDT3   A0A182RN46   A0A0M3QUP3   A0A182GRW2   A0A232F3G9   A0A182Y0W5   A0A0L0CQA0   A0A182J7M5   A0A1W4V4S8   A0A182KBT7   A0A1W4V4B9   A0A1W4V4S3   A0A1W4VGK1   A0A1W4VHY6   A0A1W4VH47   A0A1W4VH43   E2BCL9   A0A1A9VAS9   A0A1B0B944   A0A1A9WG45   K7IUL2   A0A1A9YNL2   A0A182QGK0   Q7Q758   A0A1W4XCA0   A0A182NM79   B4QEH4   A0A182FF05   A0A1S4GQ08   A0A182TYM3   A0A2S2NJZ9   A0A2P8XJG8   Q95R75   A0A182PN76   A0A2S2NF37   A0A0A9X9K6   B4HQW7   A0A0J9RC37   A0A0J9RD72   A0A0J9RC14   Q7K0H4   A0A0B4K7P4   A0A0B4K866  

PDB

3JBR     E-value=0.0455216,     Score=83

KEGG

101746672    K04860 voltage-dependent calcium channel alpha-2/delta-3 | (RefSeq) voltage-dependent calcium channe

GO

GO:0016021   GO:0150008   GO:0048786   GO:0007528   GO:0097352   GO:0007274   GO:0045886   GO:0050965   GO:0005891   GO:0005245   GO:0045202   GO:0006816  

Length:

241

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

10.29241

Exp number, first 60 AAs:

6.68037

Total prob of N-in:

0.22276

outside

1  -  241

 

 

Pi

288.680294

Theta

187.583997

Tajima's D

2.427885

CLR

0.074072

CSRT

0.936903154842258

Interpretation

Uncertain