Gene

KWMTBOMO02916

Pre Gene Modal

BGIBMGA003641

Annotation

fork_head_domain-containing_protein_FD4_[Danaus_plexippus]

Location

Bomo_Chr5(-):13774294-13781066      View in EpiBrowser

Transcription factor

Fork_head

Location in the cell

Nuclear   Reliability : 4.075

CDS

ATGCCTCGGCCGACACGTGAATCTTACGGTGATCAAAAACCACCTTTTTCATATATAGCCCTGACCGCGATGGCGATCTGGAGTTCCCCGGAGCGTATGCTGCCGCTGTCGGAGATCTACCGGTTCATCACGGATAGGTTCCCGTACTACCGGCGCAACACACAGCGCTGGCAGAACTCGCTGCGACACAACCTGTCCTTCAACGACTGCTTCGTGAAGGTGCCGCGCCGCCCCGACCGGCCCGGCAAGGGCGCGTACTGGACCCTGCATCCCCAGGCGTTTGACATGTTCGAAAATGGCTCCTTGCTTCGTCGGCGGAAACGTTTTAAGCTCCACAAAGGTGAAAAAGACAGCCTAAATGCAGAATTGGCAGCGCTCGCGAGCTTCAACAGAGCTTTCTTGGCGCGACAAGCAAGCGCTCCTCCAACACCAACGAATGCTTCTAGTGGTGGTCTGTATCCATCAGCGTCGACATACATGTCACGGTTGAGCCCAGAATCAACAGAAGCACCGGATACAGCAGCCTTATTACCTGTGGCACCTCGACCGAGAAGGGCGTTCACTATAGACGCGTTATTAGAGCCCGATCCTCGTCGCTCGTCGCCATCTCCGCCTCTGCAGCTACCGCCACTACAGCCTCACTGCCCCCTGCCCCTGCCGGCCCCGTACCTGCTCGCCGCGCAGAGATACCACGCAGAACTACTAGCGGGATTACAGCAATCTTGTCTACCACCTCTCTGGACATGGCGGGAATCAAATCAATTTTCACATTACACACTAAACTCATGA

Protein

MPRPTRESYGDQKPPFSYIALTAMAIWSSPERMLPLSEIYRFITDRFPYYRRNTQRWQNSLRHNLSFNDCFVKVPRRPDRPGKGAYWTLHPQAFDMFENGSLLRRRKRFKLHKGEKDSLNAELAALASFNRAFLARQASAPPTPTNASSGGLYPSASTYMSRLSPESTEAPDTAALLPVAPRPRRAFTIDALLEPDPRRSSPSPPLQLPPLQPHCPLPLPAPYLLAAQRYHAELLAGLQQSCLPPLWTWRESNQFSHYTLNS

Uniprot

H9J2A4   A0A2W1BML0   A0A2A4JW33   A0A2H1V3J5   A0A212F2P9   A0A194PV77   + More
A0A0N0PDE0   A0A0L7LSZ6   H9J210   A0A0L7LSA3   A0A0N1IAY8   A0A194PQL6   A0A212F2P8   A0A2A4J7M3   A0A2W1B6E1   A0A2H1V4U3   A0A0N0PDS3   A0A1B0GME1   Q17GJ8   A0A182TKZ5   A0A182GQV0   A0A182H7J4   A0A182PAE0   A0A182V4W8   A0A182QTF8   A0A182XWX6   A0A182SFZ9   A0A182LF41   A0A182LVV2   A0A182VXD0   A0A182N5T6   A0A182RA03   B0X157   A0A182HT03   F5HK36   A0A182XI20   A0A2P8YVZ1   A0A067RL19   D6W6W8   N6UJA5   A0A182G9Q1   A0A084WRG2   A0A3B0KDY8   A0A1W4WPX5   B3M1Z1   B4LVQ5   A0A2J7R3D1   A0A182HC00   Q1DGX0   E0VH79   B0XH05  

Pubmed

19121390    28756777    22118469    26354079    26227816    17510324    + More
26483478    25244985    20966253    12364791    14747013    17210077    29403074    24845553    18362917    19820115    23537049    24438588    17994087    20566863   

EMBL

BABH01007573    KZ149992    PZC75531.1    NWSH01000568    PCG75592.1    PCG75599.1    + More
ODYU01000495    SOQ35369.1    AGBW02010703    OWR48006.1    KQ459597    KPI95035.1    KQ460226    KPJ16441.1    JTDY01000195    KOB78351.1    BABH01007574    KOB78353.1    KPJ16440.1    KPI95034.1    OWR48007.1    NWSH01002700    PCG67658.1    KZ150649    PZC70415.1    PZC75530.1    ODYU01000659    SOQ35819.1    KPJ16439.1    AJVK01024455    CH477258    EAT45803.1    JXUM01081455    KQ563248    KXJ74211.1    JXUM01028133    KQ560811    KXJ80795.1    AXCN02001155    AXCM01005216    DS232254    EDS38506.1    APCN01000388    AAAB01008859    EGK96877.1    PYGN01000329    PSN48418.1    KK852563    KDR21300.1    KQ971307    EFA11474.1    APGK01022008    KB740396    KB631825    ENN80746.1    ERL86550.1    JXUM01049633    KQ561614    KXJ77997.1    ATLV01026048    KE525405    KFB52806.1    OUUW01000007    SPP83241.1    CH902617    EDV42251.1    CH940650    EDW66478.1    NEVH01007821    PNF35342.1    JXUM01032758    KQ560965    KXJ80187.1    CH900120    EAT32400.1    EAT45804.1    DS235161    EEB12735.1    DS233083    EDS27973.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000037510    + More
UP000092462    UP000008820    UP000075902    UP000069940    UP000249989    UP000075885    UP000075903    UP000075886    UP000076408    UP000075901    UP000075882    UP000075883    UP000075920    UP000075884    UP000075900    UP000002320    UP000075840    UP000007062    UP000076407    UP000245037    UP000027135    UP000007266    UP000019118    UP000030742    UP000030765    UP000268350    UP000192223    UP000007801    UP000008792    UP000235965    UP000009046   

PRIDE

H9J2A4    H9J210   

Pfam

PF00250   Forkhead

Interpro

IPR001766   Fork_head_dom        + More
IPR036388   WH-like_DNA-bd_sf       
IPR036390   WH_DNA-bd_sf       
IPR030456   TF_fork_head_CS_2       
IPR018122   TF_fork_head_CS_1       

SUPFAM

SSF46785   SSF46785       

Gene 3D

1.10.10.10    

CDD

cd00059  FH

ProteinModelPortal

H9J2A4   A0A2W1BML0   A0A2A4JW33   A0A2H1V3J5   A0A212F2P9   A0A194PV77   + More
A0A0N0PDE0   A0A0L7LSZ6   H9J210   A0A0L7LSA3   A0A0N1IAY8   A0A194PQL6   A0A212F2P8   A0A2A4J7M3   A0A2W1B6E1   A0A2H1V4U3   A0A0N0PDS3   A0A1B0GME1   Q17GJ8   A0A182TKZ5   A0A182GQV0   A0A182H7J4   A0A182PAE0   A0A182V4W8   A0A182QTF8   A0A182XWX6   A0A182SFZ9   A0A182LF41   A0A182LVV2   A0A182VXD0   A0A182N5T6   A0A182RA03   B0X157   A0A182HT03   F5HK36   A0A182XI20   A0A2P8YVZ1   A0A067RL19   D6W6W8   N6UJA5   A0A182G9Q1   A0A084WRG2   A0A3B0KDY8   A0A1W4WPX5   B3M1Z1   B4LVQ5   A0A2J7R3D1   A0A182HC00   Q1DGX0   E0VH79   B0XH05  

PDB

6FEC     E-value=1.28608e-34,     Score=364

KEGG

101740878    K09411 forkhead box protein, other | (RefSeq) fork head domain-containing protein FD4-like

GO

GO:0003700   GO:0043565   GO:0005634   GO:0016021   GO:0030154   GO:0006357   GO:0000981   GO:0009653   GO:0006355   GO:0005524   GO:0004672   GO:0007169   GO:0016020   GO:0004713   GO:0006281   GO:0048384  

Subcellular location

Nucleus  

Length:

262

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.10058

Exp number, first 60 AAs:

0.09834

Total prob of N-in:

0.05276

outside

1  -  262

 

 

Pi

401.936557

Theta

203.854395

Tajima's D

3.257852

CLR

0.616374

CSRT

0.987850607469626

Interpretation

Uncertain