Gene

KWMTBOMO02915

Pre Gene Modal

BGIBMGA003547

Annotation

Fork_head_domain-containing_protein_FD4_[Operophtera_brumata]

Location

Bomo_Chr5(+):13747007-13747958      View in EpiBrowser

Transcription factor

Fork_head

Location in the cell

Nuclear   Reliability : 3.762

CDS

ATGCCGCGACCTTCCCGCGATTCTTATGGTGATCAGAAGCCACCTTACTCATACATTTCTTTGACCGCGATGGCGATCTGGAGTTCCCCGGAGCGTATGCTGCCGCTGTCGGAGATCTACCGGTTCATTACGGATCGGTTCCCGTACTACCGGCGCAACACGCAGCGCTGGCAGAACTCGCTGCGACACAACCTGTCCTTCAACGACTGCTTCGTGAAGGTGCCGCGCCGCCCCGACCGGCCCGGCAAGGGCGCGTACTGGACCTTGCATCCCCAGGCGTTTGACATGTTCGAAAATGGCTCTTTGCTTCGTCGGCGGAAACGTTTTAAGTTACAAAAGGGAGAAAAAGATAACTTGAATGCTGAATTAGCGGCTTTGGCGAATTTTAATCGGGCGTTTTTAGCCCGACAAGCGGCCGGGCCGCCGCCGCCCGCGAGTATACCCACAGCGACTTTGTACACATCAACGTTGTGCTCTCAACTAAGCCCAGAGCCGGCAGAGCTTCCTGACGTGACTCCTATCACTATGTTGCCCAGGGAAAGACCGCGGAGGGCGTTTACGATCGATGCGTTATTGGAGCCAGATTCGCCTCGCTTGTCACCGTCGCCGCCACAGCCCATGATCAGCCTCGAGGCTCGCATGGCGGCTCCGTACGTCCTGGCCGCGCAACGCTACCACGCCGAGCTGCTGCAGGCCGCGGCGCACGCGCTTCGACCCTGCTATTTACCGCCGCCACCTTTACCGGTCGCGTGA

Protein

MPRPSRDSYGDQKPPYSYISLTAMAIWSSPERMLPLSEIYRFITDRFPYYRRNTQRWQNSLRHNLSFNDCFVKVPRRPDRPGKGAYWTLHPQAFDMFENGSLLRRRKRFKLQKGEKDNLNAELAALANFNRAFLARQAAGPPPPASIPTATLYTSTLCSQLSPEPAELPDVTPITMLPRERPRRAFTIDALLEPDSPRLSPSPPQPMISLEARMAAPYVLAAQRYHAELLQAAAHALRPCYLPPPPLPVA

Uniprot

H9J210   A0A0L7LSA3   A0A2H1V4U3   A0A0N1IAY8   A0A2A4J7M3   A0A2W1B6E1   + More
A0A194PQL6   A0A212F2P8   A0A2A4JW33   A0A2W1BML0   A0A212F2P9   A0A0N0PDE0   A0A2H1V3J5   A0A194PV77   A0A0L7LSZ6   A0A0N0PDS3   A0A194PPY8   B0X157   A0A2A4J7E0   A0A2W1BN29   A0A2J7R3D1   A0A067RL19   A0A182GQV0   A0A182H7J4   A0A182TKZ5   A0A1B0GME1   Q17GJ8   A0A182V4W8   A0A2P8YVZ1   A0A1A9W2Q1   A0A1A9Y7F8   A0A1B0BTB3   A0A182LF41   A0A1W4WPX5   B4NJV5   A0A1A9VM15   A0A1B0AHF0   A0A1B0GDY2   B4GE28   D6W6W8   A0A182RA03   A0A182N5T6   A0A084WRG2   A0A182QTF8   N6UJA5   A0A182PAE0   B3M1Z1   B4KBG6   B3P6S4   F5HK36   A0A182XI20   A0A182HT03   A0A182XWX6   A0A182SFZ9   A0A182LVV2   A0A182VXD0   A0A2R7WXR3   A0A1J1HKM7   A0A182FT34   A0A182JBJ8   E0VH79   A0A182G9Q1   Q1DGX0  

Pubmed

19121390    26227816    26354079    28756777    22118469    24845553    + More
26483478    17510324    29403074    20966253    17994087    18362917    19820115    24438588    23537049    12364791    14747013    17210077    25244985    20566863   

EMBL

BABH01007574    JTDY01000195    KOB78353.1    ODYU01000659    SOQ35819.1    KQ460226    + More
KPJ16440.1    NWSH01002700    PCG67658.1    KZ150649    KZ149992    PZC70415.1    PZC75530.1    KQ459597    KPI95034.1    AGBW02010703    OWR48007.1    NWSH01000568    PCG75592.1    PCG75599.1    PZC75531.1    OWR48006.1    KPJ16441.1    ODYU01000495    SOQ35369.1    KPI95035.1    KOB78351.1    KPJ16439.1    KPI95033.1    DS232254    EDS38506.1    PCG67656.1    PCG67657.1    KZ149960    PZC76348.1    NEVH01007821    PNF35342.1    KK852563    KDR21300.1    JXUM01081455    KQ563248    KXJ74211.1    JXUM01028133    KQ560811    KXJ80795.1    AJVK01024455    CH477258    EAT45803.1    PYGN01000329    PSN48418.1    JXJN01020071    CH964272    EDW83957.1    CCAG010012073    CH479182    EDW33863.1    KQ971307    EFA11474.1    ATLV01026048    KE525405    KFB52806.1    AXCN02001155    APGK01022008    KB740396    KB631825    ENN80746.1    ERL86550.1    CH902617    EDV42251.1    CH933806    EDW13633.1    CH954182    EDV53744.1    AAAB01008859    EGK96877.1    APCN01000388    AXCM01005216    KK855810    PTY23960.1    CVRI01000008    CRK88483.1    DS235161    EEB12735.1    JXUM01049633    KQ561614    KXJ77997.1    CH900120    EAT32400.1    EAT45804.1   

Proteomes

UP000005204    UP000037510    UP000053240    UP000218220    UP000053268    UP000007151    + More
UP000002320    UP000235965    UP000027135    UP000069940    UP000249989    UP000075902    UP000092462    UP000008820    UP000075903    UP000245037    UP000091820    UP000092443    UP000092460    UP000075882    UP000192223    UP000007798    UP000078200    UP000092445    UP000092444    UP000008744    UP000007266    UP000075900    UP000075884    UP000030765    UP000075886    UP000019118    UP000030742    UP000075885    UP000007801    UP000009192    UP000008711    UP000007062    UP000076407    UP000075840    UP000076408    UP000075901    UP000075883    UP000075920    UP000183832    UP000069272    UP000075880    UP000009046   

PRIDE

H9J210   

Pfam

PF00250   Forkhead

Interpro

IPR030456   TF_fork_head_CS_2        + More
IPR036388   WH-like_DNA-bd_sf       
IPR018122   TF_fork_head_CS_1       
IPR036390   WH_DNA-bd_sf       
IPR001766   Fork_head_dom       

SUPFAM

SSF46785   SSF46785       

Gene 3D

1.10.10.10    

CDD

cd00059  FH

ProteinModelPortal

H9J210   A0A0L7LSA3   A0A2H1V4U3   A0A0N1IAY8   A0A2A4J7M3   A0A2W1B6E1   + More
A0A194PQL6   A0A212F2P8   A0A2A4JW33   A0A2W1BML0   A0A212F2P9   A0A0N0PDE0   A0A2H1V3J5   A0A194PV77   A0A0L7LSZ6   A0A0N0PDS3   A0A194PPY8   B0X157   A0A2A4J7E0   A0A2W1BN29   A0A2J7R3D1   A0A067RL19   A0A182GQV0   A0A182H7J4   A0A182TKZ5   A0A1B0GME1   Q17GJ8   A0A182V4W8   A0A2P8YVZ1   A0A1A9W2Q1   A0A1A9Y7F8   A0A1B0BTB3   A0A182LF41   A0A1W4WPX5   B4NJV5   A0A1A9VM15   A0A1B0AHF0   A0A1B0GDY2   B4GE28   D6W6W8   A0A182RA03   A0A182N5T6   A0A084WRG2   A0A182QTF8   N6UJA5   A0A182PAE0   B3M1Z1   B4KBG6   B3P6S4   F5HK36   A0A182XI20   A0A182HT03   A0A182XWX6   A0A182SFZ9   A0A182LVV2   A0A182VXD0   A0A2R7WXR3   A0A1J1HKM7   A0A182FT34   A0A182JBJ8   E0VH79   A0A182G9Q1   Q1DGX0  

PDB

6FEC     E-value=1.03016e-34,     Score=365

KEGG

101741019    K09411 forkhead box protein, other | (RefSeq) fork head domain-containing protein FD4-like

GO

GO:0003700   GO:0043565   GO:0005634   GO:0016021   GO:0009653   GO:0030154   GO:0006357   GO:0000981   GO:0006355   GO:0005524   GO:0004672   GO:0007169   GO:0016020   GO:0004713   GO:0006281   GO:0048384  

Subcellular location

Nucleus  

Length:

250

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0342500000000001

Exp number, first 60 AAs:

0.03187

Total prob of N-in:

0.04538

outside

1  -  250

 

 

Pi

266.755631

Theta

228.797508

Tajima's D

0.522465

CLR

0.157787

CSRT

0.518574071296435

Interpretation

Uncertain