Gene

KWMTBOMO02906

Pre Gene Modal

BGIBMGA003645

Annotation

PREDICTED:_lipoyltransferase_1?_mitochondrial_isoform_X1_[Papilio_polytes]

Location

Bomo_Chr5(-):13651631-13655196      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 3.31

CDS

ATGGCTCAAGCTATGGTGAAAAGAATAGTATCCAGCAGTGCTTGCACATTTGCTGGTCTTGCACAGAAAACATATATAAGAAATGTTGCGGCATCCAGCAAAGTGGCCGCATCAAAAAAGGAGAGAGTGCTTCCAACTGAGGGGGAGATCACCAAGTCAGTGTTCATGTCTCAATCGACTGATATTTATACGAACTTGGCTCTGGAGGATTGGTTGTATAAGAACATGGACTTCACAAATCATCATGTTATGATGGTGTGGAGAAATGAGCCATGTGTGGTTATTGGAAGACATCAAAATCCTTGGCTGGAGGCGAATGTTCCACTACTTTCTGAAAAAGAAATAGCTTTGGCACGTCGTAACAGTGGTGGTGGTACTGTTTATCATGACCGAGGAAATCTGAATATAACATTCTTTGCCCCACGTGAGAGATATGACAGAAATTACAATTTGAAGTTGATTAAGAGAGCACTGTTCAGAAGTTTTGGCATTAAGTCAACTATTAATGAACGTCAGGACCTTATCGTCAGAGACAAATACAAGGTATCTGGAACAGCTGCAAAGCTTGGTCGCCTGACAGGATATCATCACTGCACCCTTCTAGTCAATGCCAACAAGGCAGATCTCAGCAAAGCTCTTGCTAAACGTGAGCATGGCATACAGACAAAAGCGACGGCCTCAACGCGATCCGAAGTGGCCAACCTGAAGGACTTGGACAACAGAATTACGGTCGAGAATCTGCAAACAGCGCTCGGCTACGAATACCTTCGTACTCCAGCTCTGCACCTGGACGACGGCGGCCAGAGCCTGATCGCAAAACAACGCGGTTTTCAGTTCGTCAATCCCACGGACGACTGGTTCCCGGGCCTGGCTGAATTGAAGAATGATTTGGTTAGCTGGGATTGGTGCTTTGGAAGAACTCCGATGTTCACTGTCAGCCGTTCCTTTCCGGTGCCCATAGGACTTCTTGCTCCGTCCAAAGTCTACTCCGCTACCCAGGAATTGGTTATTAATATGACGGTAGAAAAAGGTCTCATCAATGACGTGACCCTCAGCATTCCTCCAGGGCTTATCGAATCCGGTTTTCACGGCGAAGCTTCAGTTATAACTCATCTTAAAGGGAAGAGGTTCACTTCGGAAGCTCTAAATGCTCTCCAAGATGCAATGTTGACACGTCATCACGTAAGTGACGTCAAGGAATTGGACGATAAAGAACAATTTGTCGCTAAGTGTTTCGATCAAGTAGTCAATACTATGTAA

Protein

MAQAMVKRIVSSSACTFAGLAQKTYIRNVAASSKVAASKKERVLPTEGEITKSVFMSQSTDIYTNLALEDWLYKNMDFTNHHVMMVWRNEPCVVIGRHQNPWLEANVPLLSEKEIALARRNSGGGTVYHDRGNLNITFFAPRERYDRNYNLKLIKRALFRSFGIKSTINERQDLIVRDKYKVSGTAAKLGRLTGYHHCTLLVNANKADLSKALAKREHGIQTKATASTRSEVANLKDLDNRITVENLQTALGYEYLRTPALHLDDGGQSLIAKQRGFQFVNPTDDWFPGLAELKNDLVSWDWCFGRTPMFTVSRSFPVPIGLLAPSKVYSATQELVINMTVEKGLINDVTLSIPPGLIESGFHGEASVITHLKGKRFTSEALNALQDAMLTRHHVSDVKELDDKEQFVAKCFDQVVNTM

Uniprot

H9J2A8   A0A2H1VML9   A0A0N1IPU8   A0A0L7LGF6   A0A2A4K168   A0A194PQJ9   + More
A0A2W1BUM7   A0A212F983   K9LFM2   V5GJ25   A0A0C9RQI0   A0A1B6KYI1   D6W6Q3   A0A1B6ES07   A0A1B6DWF4   K7J3F5   A0A0M8ZUG2   A0A2J7QKU8   A0A232FF39   A0A2J7QKV7   A0A067RP90   A0A2J7QKV1   A0A0L7QZ01   A0A026WJR3   A0A195BKY1   A0A088AQB2   A0A151JZG6   A0A158P3Z9   A0A151JMU9   F4WKR5   A0A195C4R7   A0A0J7N4W1   A0A2A3EI98   E2C613   A0A0P4VJP5   A0A1B6JLZ2   A0A336MA06   A0A069DYS2   T1HRW8   A0A023F2G7   B4KT53   E0VRY9   A0A1L8DZY8   A0A1L8DZG5   A0A1L8DZH8   A0A1L8DZP4   B4LQ25   Q291J3   A0A0V0GAY8   A0A0L0C5J7   A0A1B0GKE1   B4GAM5   B3MIV7   Q8SX78   T1DK22   A0A1W4VD40   B4P6P3   B4QHH3   W5JQ12   A0A0A1WGH2   W8CD76   B4HST2   A0A1L8EAW2   A0A3B0JUH6   A0A1L8ECX9   A0A2M4A2E7   A0A2M4A2F7   A0A2M3ZKA9   A0A2M3Z0D4   A0A0K8TTB6   B4N5N1   B3NPV4   A0A224XEN5   A0A1J1HN37   B4JW95   E2AJM6   A0A182FVN1   A0A2M4BPD4   A0A224XS47   A0A2M4A2P6   A0A2M3ZKR9   Q170K5   A0A1S4FI31   A0A1Q3FHP8   B0WF90   A0A0V0G333   A0A182MPK2   A0A1Q3FHX2   A0A182UU94   A0A182W294   A0A182KSZ7   A0A182HPU2   A0A182WZY6   Q7Q008   T1PBU4   A0A034WTC8   A0A0C9RIA2   A0A182RAK6   A0A1A9WHX1   A0A182G2V3  

Pubmed

19121390    26354079    26227816    28756777    22118469    18362917    + More
19820115    20075255    28648823    24845553    24508170    30249741    21347285    21719571    20798317    27129103    26334808    25474469    17994087    20566863    15632085    26108605    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    22936249    20920257    23761445    25830018    24495485    26369729    17510324    20966253    12364791    25315136    25348373    26483478   

EMBL

BABH01007583    ODYU01003384    SOQ42071.1    KQ460226    KPJ16422.1    JTDY01001300    + More
KOB74266.1    NWSH01000285    PCG77766.1    KQ459597    KPI95014.1    KZ149960    PZC76356.1    AGBW02009627    OWR50291.1    JQ278008    AFI81409.1    GALX01004402    JAB64064.1    GBYB01010750    JAG80517.1    GEBQ01023461    JAT16516.1    KQ971307    EFA10961.1    GECZ01028994    JAS40775.1    GEDC01007293    JAS30005.1    KQ435840    KOX71375.1    NEVH01013256    PNF29216.1    NNAY01000310    OXU29305.1    PNF29215.1    KK852549    KDR21559.1    PNF29217.1    KQ414685    KOC63823.1    KK107167    QOIP01000010    EZA56287.1    RLU17899.1    KQ976453    KYM85370.1    KQ981427    KYN41765.1    ADTU01008660    ADTU01008661    KQ978949    KYN27383.1    GL888206    EGI65157.1    KQ978317    KYM95171.1    LBMM01010016    KMQ87720.1    KZ288232    PBC31447.1    GL452895    EFN76618.1    GDKW01002151    JAI54444.1    GECU01007511    JAT00196.1    UFQT01000290    SSX22868.1    GBGD01001895    JAC86994.1    ACPB03009391    GBBI01003222    JAC15490.1    CH933808    EDW09573.1    DS235634    EEB16145.1    GFDF01002222    JAV11862.1    GFDF01002223    JAV11861.1    GFDF01002221    JAV11863.1    GFDF01002220    JAV11864.1    CH940648    EDW60348.1    CM000071    EAL25119.1    GECL01001188    JAP04936.1    JRES01000883    KNC27560.1    AJWK01028717    CH479181    EDW31977.1    CH902619    EDV36017.1    AE013599    AY094796    BT050537    AAF58045.2    AAM11149.1    ACJ13244.1    GAMD01001166    JAB00425.1    CM000158    EDW91970.1    CM000362    CM002911    EDX07318.1    KMY94203.1    ADMH02000489    ETN66226.1    GBXI01016526    JAC97765.1    GAMC01002431    JAC04125.1    CH480816    EDW48096.1    GFDG01002912    JAV15887.1    OUUW01000001    SPP74728.1    GFDG01002295    JAV16504.1    GGFK01001683    MBW35004.1    GGFK01001693    MBW35014.1    GGFM01008266    MBW29017.1    GGFM01001236    MBW21987.1    GDAI01000202    JAI17401.1    CH964154    EDW79670.1    CH954179    EDV55801.1    GFTR01005489    JAW10937.1    CVRI01000012    CRK89472.1    CH916375    EDV98233.1    GL440049    EFN66353.1    GGFJ01005660    MBW54801.1    GFTR01005463    JAW10963.1    GGFK01001691    MBW35012.1    GGFM01008267    MBW29018.1    CH477472    EAT40391.1    GFDL01007986    JAV27059.1    DS231915    EDS26066.1    GECL01003609    JAP02515.1    AXCM01005231    GFDL01007885    JAV27160.1    APCN01003272    AAAB01008986    EAA00153.4    KA645428    AFP60057.1    GAKP01000166    JAC58786.1    GBYB01006651    JAG76418.1    JXUM01040149    JXUM01040150    KQ561234    KXJ79275.1   

Proteomes

UP000005204    UP000053240    UP000037510    UP000218220    UP000053268    UP000007151    + More
UP000007266    UP000002358    UP000053105    UP000235965    UP000215335    UP000027135    UP000053825    UP000053097    UP000279307    UP000078540    UP000005203    UP000078541    UP000005205    UP000078492    UP000007755    UP000078542    UP000036403    UP000242457    UP000008237    UP000015103    UP000009192    UP000009046    UP000008792    UP000001819    UP000037069    UP000092461    UP000008744    UP000007801    UP000000803    UP000192221    UP000002282    UP000000304    UP000000673    UP000001292    UP000268350    UP000007798    UP000008711    UP000183832    UP000001070    UP000000311    UP000069272    UP000008820    UP000002320    UP000075883    UP000075903    UP000075920    UP000075882    UP000075840    UP000076407    UP000007062    UP000095301    UP000075900    UP000091820    UP000069940    UP000249989   

PRIDE

H9J2A8    Q8SX78   

Pfam

PF03099   BPL_LplA_LipB

Interpro

IPR004562   LipoylTrfase_LipoateP_Ligase        + More
IPR004143   BPL_LPL_catalytic       

ProteinModelPortal

H9J2A8   A0A2H1VML9   A0A0N1IPU8   A0A0L7LGF6   A0A2A4K168   A0A194PQJ9   + More
A0A2W1BUM7   A0A212F983   K9LFM2   V5GJ25   A0A0C9RQI0   A0A1B6KYI1   D6W6Q3   A0A1B6ES07   A0A1B6DWF4   K7J3F5   A0A0M8ZUG2   A0A2J7QKU8   A0A232FF39   A0A2J7QKV7   A0A067RP90   A0A2J7QKV1   A0A0L7QZ01   A0A026WJR3   A0A195BKY1   A0A088AQB2   A0A151JZG6   A0A158P3Z9   A0A151JMU9   F4WKR5   A0A195C4R7   A0A0J7N4W1   A0A2A3EI98   E2C613   A0A0P4VJP5   A0A1B6JLZ2   A0A336MA06   A0A069DYS2   T1HRW8   A0A023F2G7   B4KT53   E0VRY9   A0A1L8DZY8   A0A1L8DZG5   A0A1L8DZH8   A0A1L8DZP4   B4LQ25   Q291J3   A0A0V0GAY8   A0A0L0C5J7   A0A1B0GKE1   B4GAM5   B3MIV7   Q8SX78   T1DK22   A0A1W4VD40   B4P6P3   B4QHH3   W5JQ12   A0A0A1WGH2   W8CD76   B4HST2   A0A1L8EAW2   A0A3B0JUH6   A0A1L8ECX9   A0A2M4A2E7   A0A2M4A2F7   A0A2M3ZKA9   A0A2M3Z0D4   A0A0K8TTB6   B4N5N1   B3NPV4   A0A224XEN5   A0A1J1HN37   B4JW95   E2AJM6   A0A182FVN1   A0A2M4BPD4   A0A224XS47   A0A2M4A2P6   A0A2M3ZKR9   Q170K5   A0A1S4FI31   A0A1Q3FHP8   B0WF90   A0A0V0G333   A0A182MPK2   A0A1Q3FHX2   A0A182UU94   A0A182W294   A0A182KSZ7   A0A182HPU2   A0A182WZY6   Q7Q008   T1PBU4   A0A034WTC8   A0A0C9RIA2   A0A182RAK6   A0A1A9WHX1   A0A182G2V3  

PDB

3A7U     E-value=2.06055e-58,     Score=572

KEGG

101741825    K10105 lipoyltransferase 1 | (RefSeq) lipoyltransferase 1, mitochondrial

PATHWAY

00785    Lipoic acid metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0009249   GO:0016740   GO:0016874   GO:0016779   GO:0005739   GO:0017118   GO:0006464   GO:0004713   GO:0006468   GO:0005524   GO:0004672   GO:0007169   GO:0016020   GO:0006281   GO:0048384  

PANTHER

PTHR12561  

Length:

419

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02795

Exp number, first 60 AAs:

0.02222

Total prob of N-in:

0.02515

outside

1  -  419

 

 

Pi

274.471261

Theta

209.479634

Tajima's D

0.780455

CLR

0.364018

CSRT

0.590620468976551

Interpretation

Uncertain