SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02902  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003648
Annotation
putative_ubiquitin_protein_ligase_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 1.962 PlasmaMembrane   Reliability : 1.774
 

Sequence

CDS
ATGTATTCATTCGAGGGAGACTTTAGGCGAAAACCCCAACAAAATTTAGCAGGTGCAAGCGCGGCACGAAAGACCGATAGAGACTCTTTGATTCAACAAACACAGTTACAAAGACAAAAACGAGAGGAACACCGAAAACGTTTAAACAGTGTTATAAAAATTCAAGCATATTTTAGAAGCTACTTAACCAGAAAAAAATGTAAACAAGTAGAAAGGGACCAATTTGATGATATGTTTCCTAGAATTAATGTAGAAGATCAAACAACAATCTCAGCACTGTTAGCAAAAATATTTTTCTTCTATGATGACAAAGCTGATGTTTCTAGATTGGTATCAATATCACAATTGTTGTTAAAACAATGGAAAAAGGTCTTCCACAACAGTGGCTCTAGTATACAGATAAGAAGATTACTAGCATTACATTTGCGACTATTGAAGTATAACACAGAGGTGCCTTTAGCAGTTCCACTCAGAATGTTTGAAGTATTCACATCCACTAGTACAGTAGAAGCAGCAATGAACTGTGATGAGGCACTGAGATTTGTTGCCAATACATTCTTGTATTTAATTAAAAGAGGCTATTTCATGGATCTGTGTAAATTAATATGTGAAAAGACCCCACCAATGTATGGTCCATCACCAAACCCACCCACCCCATTAAGCGGAGCACTTTTAGAGTTAATTCAGCGCCCTCTGTCACTGATCCTGCGAGTGAACATTCCTCAGTATGAAGATACAGTAACAACAGAGTTTACTGCGGCATTTTTGTGCAATCCGTATCCAGAACCAGTAGAAATGTTTATATTACCATCTCTAGCACAGGATACCACAAAGAAACTATCATTCTTAGCATTAATAAAGTGTTTACAAGACGACAACAAATATCATAGTAAAAAGATTATAAACGATTCTTGGTTATTGCATTCGGTTTTGGTTTTAGAGCCAAAGCAATTTATAAGTGAAATAAAAAATATTGACAATACAAGATTGCCAAGCAATAGAATAGTAATAGAATACCTTAAGGTAATAGCTAGATTGACTGAGAATGTGTGCAACAAACAAATCACCTACGAATTTGAAGACTCACTGTACAGTCAAGAAACTGCAGCGGACAAAGATGATGAAAGTGACAGCGAAACCGAACCGAATCCCACCTCTATTCGTGAACAGATGCTGCTGACGCGGTGTATTGAATTATTGAATGATCCAGAAAGATGCATTATGGTCACCATATCTCAAATAACAGATAATGATTTAAGTGAAGAATTTTTAGAGTACATGTCTGAGATCTGTCACAATTTGCTTTTGAGTCATCGTATGGCTTTGCATAAGTACAGGTTATTGTATACGCTAGCATTTAAACCGATATTCTTACGAGGTCTATGGCGCTGGTTGAGTAATATGAACCACGCTTCCTCGTTCGGTGGTTCGTCCACGTCTCTCCTGTCTGCGTTGTCCCGCGGTATGGGTGCCGAAACTTCTGTGATAGGTGTTCATAGACTACTGGCACCTTTGGCTGTCTTCTGCGCCTTGTTCTCGCTATTAATCGGAACCTTACACGATACGGAGTTCTGCAAAGATATGGACGATGATGAGAAAATGAGCGTGTTGAACGCCGGCGGTGGGGGTGGCAGGATTCACGCGTTTGAGTTCTCGGAACTTGGCGGTCTCTGCAGAACGTTACGCCAAGTCTGTCTCGGTCTCATAGAACTGGCCTACCCTGAGTCGAGGCTCACTGCCTGTGGACTGTACAAAGATGCTGTGGGTTACACTGACGTCGAAATGTCTGGCAAGAATAGGACGCCAGCGTGGTCACATCTATTTAAAGTAAGTTCAATTTTCTAA
Protein
MYSFEGDFRRKPQQNLAGASAARKTDRDSLIQQTQLQRQKREEHRKRLNSVIKIQAYFRSYLTRKKCKQVERDQFDDMFPRINVEDQTTISALLAKIFFFYDDKADVSRLVSISQLLLKQWKKVFHNSGSSIQIRRLLALHLRLLKYNTEVPLAVPLRMFEVFTSTSTVEAAMNCDEALRFVANTFLYLIKRGYFMDLCKLICEKTPPMYGPSPNPPTPLSGALLELIQRPLSLILRVNIPQYEDTVTTEFTAAFLCNPYPEPVEMFILPSLAQDTTKKLSFLALIKCLQDDNKYHSKKIINDSWLLHSVLVLEPKQFISEIKNIDNTRLPSNRIVIEYLKVIARLTENVCNKQITYEFEDSLYSQETAADKDDESDSETEPNPTSIREQMLLTRCIELLNDPERCIMVTISQITDNDLSEEFLEYMSEICHNLLLSHRMALHKYRLLYTLAFKPIFLRGLWRWLSNMNHASSFGGSSTSLLSALSRGMGAETSVIGVHRLLAPLAVFCALFSLLIGTLHDTEFCKDMDDDEKMSVLNAGGGGGRIHAFEFSELGGLCRTLRQVCLGLIELAYPESRLTACGLYKDAVGYTDVEMSGKNRTPAWSHLFKVSSIF

Summary

Catalytic Activity
S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.
EMBL
BABH01007596    BABH01007597    BABH01007598    BABH01007599    BABH01007600    GDQN01006625    + More
JAT84429.1    GDQN01005476    JAT85578.1    ODYU01007914    SOQ51109.1    NWSH01000285    PCG77760.1    KZ149960    PZC76361.1    KQ460226    KPJ16427.1    AGBW02014037    OWR42368.1    JTDY01004837    KOB67689.1    NEVH01022635    PNF18607.1    LBMM01002028    KMQ95376.1    KK853201    KDR09906.1    KQ435713    KOX79296.1    KQ977890    KYM98999.1    GL452203    EFN77772.1    KK107238    QOIP01000007    EZA54854.1    RLU20360.1    KQ980039    KYN18133.1    GL437208    EFN70795.1    KQ976395    KYM93075.1    GL888455    EGI60676.1    KQ981960    KYN31906.1    ADTU01020292    NNAY01001008    OXU25516.1    KQ414727    KOC62552.1    KQ435127    KZC14784.1    KQ982060    KYQ60579.1    DS235442    EEB15810.1    GECZ01026610    JAS43159.1    PYGN01000344    PSN48070.1    GBYB01010005    JAG79772.1    GEDC01020879    JAS16419.1    GL732541    EFX82031.1    JXJN01022202    GFXV01005821    MBW17626.1    GDHF01007517    JAI44797.1    GDIP01141382    JAL62332.1    GDIQ01184745    JAK66980.1    GDIP01140274    JAL63440.1    GGMS01000568    MBY69771.1    GDIP01160034    JAJ63368.1    GDIP01160033    JAJ63369.1    KA647922    AFP62551.1    GDIP01239073    JAI84328.1    JH431855    GDIP01160032    JAJ63370.1    JR053746    AEY62010.1    GDIP01239072    JAI84329.1    GDIP01160035    JAJ63367.1    GDIP01089784    JAM13931.1    GDIP01156480    JAJ66922.1    GDIP01209669    JAJ13733.1    NEDP02000888    OWF54780.1    GDIP01161673    JAJ61729.1    GDIP01181116    JAJ42286.1    GDIQ01006569    JAN88168.1    GDIP01129823    JAL73891.1    GDIP01158872    JAJ64530.1    GDIP01160031    JAJ63371.1    GDIP01211927    JAJ11475.1    AMQN01013239    KB310056    ELT92644.1    GL768105    EFZ12282.1    CH940648    EDW60631.1    CH954179    EDV56971.1    PNF18609.1    CH902619    EDV37490.1    CAEY01001585    CM000158    EDW92503.1    CM000362    CM002911    EDX08519.1    KMY96291.1    CH480820    EDW53947.1    AE013599    AY069726    AAF47181.1    AAL39871.1    GDIP01132585    JAL71129.1    KQ419326    KOF83972.1    GDIP01133776    JAL69938.1    GDIP01212714    JAJ10688.1    CAQQ02018150    CAQQ02018151    UFQS01003124    UFQT01003124    SSX15237.1    SSX34612.1    UFQT01002994    SSX34410.1    GEBQ01015496    JAT24481.1    ABLF02033481    ABLF02033487    CP012524    ALC41873.1    JT412358    AHH39815.1    HACG01029989    CEK76854.1    CVRI01000040    CRK94907.1    AAGJ04132473    KK113905    KFM61319.1    HAEB01002956    HAEC01008838    SBQ49483.1    FR904266    CDQ56590.1   
Pfam
PF00632   HECT        + More
PF00612   IQ
PF02460   Patched
PF10221   DUF2151
PF02668   TauD
Interpro
IPR035983   Hect_E3_ubiquitin_ligase        + More
IPR000569   HECT_dom       
IPR000048   IQ_motif_EF-hand-BS       
IPR003392   Ptc/Disp       
IPR000731   SSD       
IPR019355   Cell_cycle_regulator_Mat89Bb       
IPR042098   TauD-like_sf       
IPR003819   TauD/TfdA-like       
SUPFAM
SSF56204   SSF56204       
Gene 3D

Ontologies

Topology

Length:
614
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
13.78542
Exp number, first 60 AAs:
0.00013
Total prob of N-in:
0.02524
outside
1  -  614
 
 

Population Genetic Test Statistics

Pi
254.635659
Theta
194.714021
Tajima's D
1.030648
CLR
0.193599
CSRT
0.666016699165042
Interpretation
Uncertain
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