Gene

KWMTBOMO02897

Pre Gene Modal

BGIBMGA003650

Annotation

PREDICTED:_voltage-dependent_calcium_channel_subunit_alpha-2/delta-3_[Bombyx_mori]

Location

Bomo_Chr5(-):13335111-13352368      View in EpiBrowser

Location in the cell

Lysosomal   Reliability : 1.701

CDS

ATGTATAAGCTTGCGGATAATCAAAGCAGGGTCGACACGCAACCATTGAGAATACCAGCGAACCGAAAGGGTTGCCAAATGTCACCTCACAAGCGGATCATGGACAGCGCCGAAGCCGCCGCGCTATCATCAAGCAGTGGATCTGAAGGCACCCCCGGTACATATTACGACGCGCGATGGTTAAATGTCCACGCTGATGATGGAACTCTGGCGGCGAAGGCACGACGTTTGCTCCTCGCCCCCAGTCGGCACTTTGATCACATCGCTGTCAACACTAGCTATAGTGCTGTTTTGATGCCGCCCTATATCAGCGTTGAAGATCCCGAAGTGCAAAATCAGATCGCGTGGTCAGAGCACTTGGATCCTTTGTTCGTTAACAACTACGAAATAGATCCTACATTGTCGTGGCAATATTATGCTTCTTCCAGTGGATTTATGAGGAGATATCCAGCAATGTCCTGGCCTCCGGAAGACGGCTATTCACACCACGCCCGAGACTTTTACGACTTCAGATCGTCGAACTGGTTCGTCGAGTCGGCGACATCTCCGAAAGACTTGGTCATTCTACTCGATGACTCTGATGACGTCAGCTCATCGTACTGGAGACTGGCGAAGGCTACCGTATCGGCTCTACTCGACACGCTCGGCCCTAACGACTTCGTGAATGTGTACCGTTACAGCGACACGGTAGCGGAGATAAACTCTTGCTACACGAAGGTTTTAGCTCAGGCCCTCCCTGAAACCCTGCGTGAAATGAAAACGTCGTTGTGGAATGCCGAAATAACTGGCGGAATCGCGAACATAACAGGGGCCCTCACCACAGCCTTCGAAATTCTACATCGGTATAATCGTACCGGACAAGGGTGCCAGTGCAACCAGGCTATAGCGGTGGTGGGGGCGGGCGGCGGCGCTGGTGGCGTCAACCGCGTGTTCCGCACTTGGAACTGGCCGCACATGCCCGTCAGAATATTTACGTACCGAACGGGAGGAGACGCGGCTGCCGGGGTATATATGCAGGAAATGGCATGCACAAACAAAGGTTTCTACGTAACTATAAACGACCACTCCGAGATTCGGCCAAAAGTTCTTCACTTCGTCGAAGTACTGGCGCGTCCGCTCGTCATGTACCAAAATGTCCACCCGGTGCACTGGAGTCCGGTTTACGTCGGAGGACGAAGCAGTAGCCTCGCCGATAACGGAATGGGTCAGCTTATGACATCAGTAACAGTTCCCATATTCGACAGGAGAAACCATACGCAAAGGGAAGCGAATTTACTAGGTGCTGTTGGAACAGACGTGCCGGTCGATCAAATAAAGAAGCTCGTACCACCGTACAAGTTGGGCGTTAATGGCTATTCGTTCATGGTGGACAACAACGGGCATGTATTATACCACCCGGACTTAAGACCATTGCATACAAACGAAGAAGTAAGTAGAATGTTAATCTAA

Protein

MYKLADNQSRVDTQPLRIPANRKGCQMSPHKRIMDSAEAAALSSSSGSEGTPGTYYDARWLNVHADDGTLAAKARRLLLAPSRHFDHIAVNTSYSAVLMPPYISVEDPEVQNQIAWSEHLDPLFVNNYEIDPTLSWQYYASSSGFMRRYPAMSWPPEDGYSHHARDFYDFRSSNWFVESATSPKDLVILLDDSDDVSSSYWRLAKATVSALLDTLGPNDFVNVYRYSDTVAEINSCYTKVLAQALPETLREMKTSLWNAEITGGIANITGALTTAFEILHRYNRTGQGCQCNQAIAVVGAGGGAGGVNRVFRTWNWPHMPVRIFTYRTGGDAAAGVYMQEMACTNKGFYVTINDHSEIRPKVLHFVEVLARPLVMYQNVHPVHWSPVYVGGRSSSLADNGMGQLMTSVTVPIFDRRNHTQREANLLGAVGTDVPVDQIKKLVPPYKLGVNGYSFMVDNNGHVLYHPDLRPLHTNEEVSRMLI

Uniprot

H9J2B3   A0A212ELK1   A0A2W1BUN7   A0A194PNL7   A0A0N0PDD7   A0A2P8XES1   + More
A0A067RSJ0   A0A1W4WYM4   D7EJQ5   A0A139WP66   A0A1W4WNW6   A0A1Y1NDS7   A0A151IZ18   A0A0N0BJP4   A0A3L8D6Z3   F4WZC3   E1ZUW0   E2CA01   A0A1B6EG99   A0A087ZWJ7   A0A0B5ELM2   A0A2A3EMD0   A0A026WQ51   A0A0L7QVQ2   A0A310SL36   A0A195AUQ7   A0A158NHL6   E0VI01   A0A0C9RTP2   A0A195C1G5   A0A195ETP7   K7IUB7   U4UP84   A0A1S4E906   A0A1S4E9E2   N6T239   A0A182XCH8   A0A182WHI9   A0A182V6B5   A0A182MB94   A0A182JM09   Q7PM11   A0A182F1L7   A0A1S4H1I7   A0A182L5Z2   A0A182ICM5   A0A182UFE1   A0A182K756   A0A182RRI1   A7LBJ7   A0A182Q9P3   W5JQN6   A0A182Y5L4   A0A182GZ58   A0A182NUX2   Q16WY0   B0WF08   W8BII6   A0A182P3C8   A0A1I8PM32   A0A1I8PLZ9   A0A1B6HNM4   A0A0M4E690   B4NY93   A0A0R1DN47   B3N605   A0A0Q5WA44   B4KKY4   A8DZ06   X2J9Z3   A0A0J9TNV7   A0A0J9R2T0   W8BVD8   A0A0L0CMN0   W8AW12   Q29KE9   A0A0R3NUP1   A0A1I8NBR2   A0A3B0JNG7   B4N016   A0A336LYX8   A0A1W4V2R8   A0A1W4VGC6   A0A0Q9VZ03   A0A336KCU2   A0A1B0FKN7   B3ML95   A0A0P8XE51   A0A1A9X488   A0A154P2S8   B4HXS2   A0A1J1IL18   B4Q6G9   B4HBY5   B4JQ69   A0A2S2R5B3   A0A2H8TFU7   J9K4F6   D0IQF5  

Pubmed

19121390    22118469    28756777    26354079    29403074    24845553    + More
18362917    19820115    28004739    30249741    21719571    20798317    24508170    21347285    20566863    20075255    23537049    12364791    20966253    20920257    23761445    25244985    26483478    17510324    24495485    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    26108605    15632085    25315136   

EMBL

BABH01007608    BABH01007609    BABH01007610    BABH01007611    AGBW02014037    OWR42366.1    + More
KZ149960    PZC76366.1    KQ459597    KPI95026.1    KQ460226    KPJ16431.1    PYGN01002430    PSN30498.1    KK852486    KDR22779.1    KQ971307    EFA12820.2    KYB29565.1    GEZM01005528    JAV96114.1    KQ980745    KYN13652.1    KQ435713    KOX79241.1    QOIP01000012    RLU16039.1    GL888471    EGI60451.1    GL434297    EFN75052.1    GL453916    EFN75238.1    GEDC01000340    JAS36958.1    KJ485709    AJE70861.1    KZ288215    PBC32432.1    KK107131    EZA58162.1    KQ414727    KOC62611.1    KQ763441    OAD55095.1    KQ976737    KYM75973.1    ADTU01015941    ADTU01015942    ADTU01015943    ADTU01015944    ADTU01015945    ADTU01015946    ADTU01015947    ADTU01015948    ADTU01015949    ADTU01015950    DS235174    EEB13007.1    GBYB01012115    JAG81882.1    KQ978350    KYM94719.1    KQ981975    KYN31613.1    AAZX01005288    KB632384    ERL94313.1    APGK01047174    APGK01047175    KB741077    ENN74179.1    AXCM01001522    AAAB01008980    EAA14534.4    APCN01005734    EF990671    ABS30732.1    AXCN02000750    ADMH02000615    ETN65618.1    JXUM01098836    JXUM01098837    JXUM01098838    KQ564450    KXJ72255.1    CH477551    EAT39108.2    DS231913    EDS25916.1    GAMC01013474    JAB93081.1    GECU01031420    JAS76286.1    CP012523    ALC39821.1    CM000157    EDW89729.2    KRJ98676.1    CH954177    EDV58043.2    KQS70228.1    CH933807    EDW11714.2    AE014134    ABV53683.3    ABV53684.2    AGB93001.2    AGB93002.2    AHN54477.1    AHN54478.1    AAF53476.4    AHN54476.1    CM002910    KMY90395.1    KMY90396.1    GAMC01013476    JAB93079.1    JRES01000175    KNC33608.1    GAMC01013475    JAB93080.1    CH379061    EAL33226.3    KRT04823.1    OUUW01000006    SPP82423.1    CH963920    EDW77951.2    UFQS01000219    UFQT01000219    SSX01549.1    SSX21929.1    CH940654    KRF77992.1    SSX01548.1    SSX21928.1    CCAG010005032    CH902620    EDV30684.2    KPU72989.1    KQ434792    KZC05430.1    CH480818    EDW51852.1    CVRI01000054    CRL00856.1    CM000361    EDX05151.1    CH479272    EDW39996.1    CH916372    EDV99049.1    GGMS01015982    MBY85185.1    GFXV01001115    MBW12920.1    ABLF02036139    ABLF02036143    ABLF02036144    ABLF02036153    BT100193    ACY40027.1   

Proteomes

UP000005204    UP000007151    UP000053268    UP000053240    UP000245037    UP000027135    + More
UP000192223    UP000007266    UP000078492    UP000053105    UP000279307    UP000007755    UP000000311    UP000008237    UP000005203    UP000242457    UP000053097    UP000053825    UP000078540    UP000005205    UP000009046    UP000078542    UP000078541    UP000002358    UP000030742    UP000079169    UP000019118    UP000076407    UP000075920    UP000075903    UP000075883    UP000075880    UP000007062    UP000069272    UP000075882    UP000075840    UP000075902    UP000075881    UP000075900    UP000075886    UP000000673    UP000076408    UP000069940    UP000249989    UP000075884    UP000008820    UP000002320    UP000075885    UP000095300    UP000092553    UP000002282    UP000008711    UP000009192    UP000000803    UP000037069    UP000001819    UP000095301    UP000268350    UP000007798    UP000192221    UP000008792    UP000092444    UP000007801    UP000091820    UP000076502    UP000001292    UP000183832    UP000000304    UP000008744    UP000001070    UP000007819   

PRIDE

H9J2B3    X2J9Z3    D0IQF5   

Pfam

PF13768   VWA_3        + More
PF08473   VGCC_alpha2
PF08399   VWA_N
PF02743   dCache_1
PF00092   VWA
PF00271   Helicase_C
PF00270   DEAD
PF13234   rRNA_proc-arch
PF08148   DSHCT

Interpro

IPR036465   vWFA_dom_sf        + More
IPR002035   VWF_A       
IPR013608   VWA_N       
IPR033479   dCache_1       
IPR013680   VDCC_a2/dsu       
IPR012961   Ski2_C       
IPR011545   DEAD/DEAH_box_helicase_dom       
IPR001650   Helicase_C       
IPR014001   Helicase_ATP-bd       
IPR027417   P-loop_NTPase       
IPR025696   rRNA_proc-arch_dom       

SUPFAM

SSF53300   SSF53300        + More
SSF52540   SSF52540       

Gene 3D

3.40.50.410    

CDD

cd00079  HELICc

ProteinModelPortal

H9J2B3   A0A212ELK1   A0A2W1BUN7   A0A194PNL7   A0A0N0PDD7   A0A2P8XES1   + More
A0A067RSJ0   A0A1W4WYM4   D7EJQ5   A0A139WP66   A0A1W4WNW6   A0A1Y1NDS7   A0A151IZ18   A0A0N0BJP4   A0A3L8D6Z3   F4WZC3   E1ZUW0   E2CA01   A0A1B6EG99   A0A087ZWJ7   A0A0B5ELM2   A0A2A3EMD0   A0A026WQ51   A0A0L7QVQ2   A0A310SL36   A0A195AUQ7   A0A158NHL6   E0VI01   A0A0C9RTP2   A0A195C1G5   A0A195ETP7   K7IUB7   U4UP84   A0A1S4E906   A0A1S4E9E2   N6T239   A0A182XCH8   A0A182WHI9   A0A182V6B5   A0A182MB94   A0A182JM09   Q7PM11   A0A182F1L7   A0A1S4H1I7   A0A182L5Z2   A0A182ICM5   A0A182UFE1   A0A182K756   A0A182RRI1   A7LBJ7   A0A182Q9P3   W5JQN6   A0A182Y5L4   A0A182GZ58   A0A182NUX2   Q16WY0   B0WF08   W8BII6   A0A182P3C8   A0A1I8PM32   A0A1I8PLZ9   A0A1B6HNM4   A0A0M4E690   B4NY93   A0A0R1DN47   B3N605   A0A0Q5WA44   B4KKY4   A8DZ06   X2J9Z3   A0A0J9TNV7   A0A0J9R2T0   W8BVD8   A0A0L0CMN0   W8AW12   Q29KE9   A0A0R3NUP1   A0A1I8NBR2   A0A3B0JNG7   B4N016   A0A336LYX8   A0A1W4V2R8   A0A1W4VGC6   A0A0Q9VZ03   A0A336KCU2   A0A1B0FKN7   B3ML95   A0A0P8XE51   A0A1A9X488   A0A154P2S8   B4HXS2   A0A1J1IL18   B4Q6G9   B4HBY5   B4JQ69   A0A2S2R5B3   A0A2H8TFU7   J9K4F6   D0IQF5  

PDB

3JBR     E-value=6.38826e-44,     Score=448

KEGG

101735565    no KO assigned | (RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3

GO

GO:0005891   GO:0005245   GO:0016021   GO:0003676   GO:0005524  

Length:

482

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.413910000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02311

outside

1  -  482

 

 

Pi

201.854864

Theta

154.385774

Tajima's D

0.634527

CLR

0.628167

CSRT

0.554322283885806

Interpretation

Uncertain