Gene

KWMTBOMO02879  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003658

Annotation

Trans-1?2-dihydrobenzene-1?2-diol_dehydrogenase_[Papilio_xuthus]

Location

Bomo_Chr5(-):13088741-13092673      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.609

CDS

ATGACCATACGTTGGGGTATCGTAACCGCAGGAAAAATCAGCCATGATTTTGTTAACGCTTTCAACAGCTATCCTAACAAGGGGGATCAGGTTATAGCCGCAGTAGCCGCTCGAACGAAGCCAGAAGAATTTGCAAAGCTACACAATATTCCCATAGTATTCGATTCCTATAAAGCCTTGGCTGAGAGTAATGAGATTGATGTGGCTTATATTGGTGCGCTAAATCCTGATCATTACAACATATCAAAACTATTTCTCGAAAACGGCAAGCATGTTCTTTGCGAAAAACCTTTGTGTTTGAACTACAAACAAGCCGAGAGCCTAATCAGGTTTGCGAAGAATAAGAAACTATTTCTAATGGAAGCTGTTTGGTCGAGATTTTCTCCCACCTACATTGCCATTGAAAAAGAAATCAATTCCGGGAAATTGGGAGACGTTATGTTCGTCGAAGTCAATTTTGGTGTACCTATTGTTACAGTCGATAGACTGAGGAAAAAGGAATTAGGCGGAAGTTCTGTTATGGACATTGGAATTTACACACTGCAATTTGCTCAATACATATTTAAGGAGGAACCCAAAAAAGTAACAACTGTAGGGGGTCTGAACGAAGACGGAGTGGACATTTACGAAACGATAATTTTAGAGTATGATGGTGACAGACGCGCAGTCCTCAACGTTGATAGTAGGTTCAAAATGTGGAACAAAGCCACTGTGGTTGGCACCAACGGTCATATTACAATAGAGGATCCGTTCCATTTCCCGGAAATTTTCATTAATACAGATGGAACAGTAGAAAAGTTTCCGCTTCATAAATCTTCATTACCCTACAACTTCAGAAACAGCGCCGGTTTAGTTTACCAAGCGCTTGAAGTAGAAAAGTGTCTTAAAGAAGGGCTAATTGAATCACCTCGTATGTCACATAAGGAAAGCTTAGTCTTGGCAAAATTGGAGCAAACGGTCCGCAAACAACTTGGAGTTTACTATGATGTTGATGACCAAGAATTTCCTTGA

Protein

MTIRWGIVTAGKISHDFVNAFNSYPNKGDQVIAAVAARTKPEEFAKLHNIPIVFDSYKALAESNEIDVAYIGALNPDHYNISKLFLENGKHVLCEKPLCLNYKQAESLIRFAKNKKLFLMEAVWSRFSPTYIAIEKEINSGKLGDVMFVEVNFGVPIVTVDRLRKKELGGSSVMDIGIYTLQFAQYIFKEEPKKVTTVGGLNEDGVDIYETIILEYDGDRRAVLNVDSRFKMWNKATVVGTNGHITIEDPFHFPEIFINTDGTVEKFPLHKSSLPYNFRNSAGLVYQALEVEKCLKEGLIESPRMSHKESLVLAKLEQTVRKQLGVYYDVDDQEFP

Uniprot

H9J2C1   A0A194PNI9   S4P4A7   A0A2A4J2T5   A0A2W1BXA3   A0A2W1BRW6   + More
A0A2A4J2U8   A0A194QYM0   A0A2A4K2G4   A0A2H1VG95   A0A212FM46   A0A067QX71   A0A1B0GPG9   A0A0K8TTM1   A0A1L8E2I1   A0A1L8E212   A0A1A9XN38   W8BTQ4   A0A1B6CSQ0   A0A1A9W5F5   A0A1Y1M984   A0A1B0AT96   A0A1A9ZJG4   A0A1A9UMK4   A0A034WTE5   A0A1B6EK94   A0A1B6GV24   A0A0A1X461   A0A1B0F9J8   A0A2J7RKP2   A0A0K8W9S1   U5EL44   A0A1B6HVU3   A0A1I8M199   A0A151IMP4   A0A195EL60   A0A1Q3FQ73   A0A1I8NNZ7   E2AXQ4   B0X5Q2   A0A158NPM5   A0A151WJ49   A0A026W2Y1   T1GXU5   A0A0L0BSW4   A0A195AT36   B3MPI9   F4W7M8   A0A1W4WJX5   A0A1W0WMJ2   A0A195ETJ0   D6W762   A0A1W4UTW9   A0A1S4FP90   A0A154PMX1   A0A0J9QUB3   B4I2J4   Q16UC6   Q9VQB4   A0A182GPQ0   A0A226DXU2   E9I8Q2   B3N9K5   A0A1B0CN82   A0A1B0CWQ5   E2BUF6   A0A2P6KSX1   B4MVW8   B4NWN6   A0A226E6P8   A0A3B0JHJ9   A0A182PAM0   A0A2A3EAV6   A0A1L8E1K5   A0A0J7KRK4   A0A1B6C4D3   A0A182WHA4   B4KJS8   A0A182XKT8   A0A182QP31   A0A182MC66   A0A0C9QG12   A0A182U3C8   H9K9P8   B4JQY6   A0A182I5A6   A0A182KYZ1   Q29MK9   B4G927   A0A194PQ22   A0A2M3YZS0   A0A2M3ZFV1   A0A182RG54   A0A182W8W4   A0A182VND1   A0A2M4BT72   A0A2M4BT63   A0A182PG54   A0A182MH58   A0A1Y1MRP5  

Pubmed

19121390    26354079    23622113    28756777    22118469    24845553    + More
26369729    24495485    28004739    25348373    25830018    25315136    20798317    21347285    24508170    30249741    26108605    17994087    21719571    18362917    19820115    22936249    17510324    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26483478    21282665    18057021    17550304    20966253    15632085   

EMBL

BABH01007651    KQ459597    KPI94996.1    GAIX01006064    JAA86496.1    NWSH01003900    + More
PCG65712.1    KZ149960    PZC76383.1    PZC76384.1    PCG65713.1    KQ461150    KPJ08681.1    NWSH01000269    PCG77870.1    ODYU01002386    SOQ39816.1    AGBW02007682    OWR54759.1    KK853253    KDR09314.1    AJVK01033660    GDAI01000105    JAI17498.1    GFDF01001369    JAV12715.1    GFDF01001370    JAV12714.1    GAMC01003995    GAMC01003992    GAMC01003988    JAC02568.1    GEDC01021015    GEDC01004107    JAS16283.1    JAS33191.1    GEZM01037072    JAV82213.1    JXJN01003215    JXJN01003216    GAKP01001350    GAKP01001349    JAC57602.1    GECZ01031411    JAS38358.1    GECZ01003534    JAS66235.1    GBXI01013938    GBXI01008742    GBXI01005282    JAD00354.1    JAD05550.1    JAD09010.1    CCAG010019949    NEVH01002717    PNF41391.1    GDHF01028557    GDHF01017237    GDHF01010628    GDHF01009375    GDHF01004408    JAI23757.1    JAI35077.1    JAI41686.1    JAI42939.1    JAI47906.1    GANO01001580    JAB58291.1    GECU01036581    GECU01033143    GECU01032834    GECU01031311    GECU01028923    GECU01025458    GECU01017110    GECU01016141    GECU01007889    GECU01005837    GECU01003860    JAS71125.1    JAS74563.1    JAS74872.1    JAS76395.1    JAS78783.1    JAS82248.1    JAS90596.1    JAS91565.1    JAS99817.1    JAT01870.1    JAT03847.1    KQ977026    KYN06220.1    KQ978730    KYN28995.1    GFDL01005284    JAV29761.1    GL443628    EFN61800.1    DS232392    EDS41033.1    ADTU01022615    KQ983049    KYQ47851.1    KK107488    QOIP01000012    EZA49946.1    RLU16030.1    CAQQ02123182    JRES01001418    KNC23111.1    KQ976745    KYM75383.1    CH902620    EDV31285.1    GL887844    EGI69901.1    MTYJ01000074    OQV16409.1    KQ981986    KYN31194.1    KQ971307    EFA11514.1    KQ434996    KZC13216.1    CM002910    KMY87661.1    KMY87662.1    CH480820    EDW53989.1    CH477625    EAT38123.1    AE014134    BT010300    AAF51262.1    AAQ23618.1    ADV36935.1    JXUM01078870    KQ563093    KXJ74488.1    LNIX01000009    OXA50093.1    GL761642    EFZ23042.1    CH954177    EDV57462.1    KQS69992.1    AJWK01019891    AJWK01032758    GL450640    EFN80683.1    MWRG01005749    PRD29441.1    CH963857    EDW75838.1    CM000157    EDW87378.1    LNIX01000006    OXA52541.1    OUUW01000004    SPP79772.1    KZ288301    PBC28848.1    GFDF01001471    JAV12613.1    LBMM01003940    KMQ92973.1    GEDC01029129    JAS08169.1    CH933807    EDW11523.1    AXCN02000825    AXCM01005520    GBYB01002344    JAG72111.1    CH916372    EDV99316.1    APCN01003842    CH379060    EAL33684.1    CH479180    EDW28857.1    KPI95063.1    GGFM01001019    MBW21770.1    GGFM01006610    MBW27361.1    GGFJ01007134    MBW56275.1    GGFJ01007135    MBW56276.1    AXCM01004965    GEZM01024715    JAV87738.1   

Proteomes

UP000005204    UP000053268    UP000218220    UP000053240    UP000007151    UP000027135    + More
UP000092462    UP000092443    UP000091820    UP000092460    UP000092445    UP000078200    UP000092444    UP000235965    UP000095301    UP000078542    UP000078492    UP000095300    UP000000311    UP000002320    UP000005205    UP000075809    UP000053097    UP000279307    UP000015102    UP000037069    UP000078540    UP000007801    UP000007755    UP000192223    UP000078541    UP000007266    UP000192221    UP000076502    UP000001292    UP000008820    UP000000803    UP000069940    UP000249989    UP000198287    UP000008711    UP000092461    UP000008237    UP000007798    UP000002282    UP000268350    UP000075885    UP000242457    UP000036403    UP000075920    UP000009192    UP000076407    UP000075886    UP000075883    UP000075902    UP000005203    UP000001070    UP000075840    UP000075882    UP000001819    UP000008744    UP000075900    UP000075903   

PRIDE

H9J2C1    Q9VQB4    H9K9P8   

Pfam

PF01408   GFO_IDH_MocA        + More
PF02894   GFO_IDH_MocA_C

Interpro

IPR036291   NAD(P)-bd_dom_sf        + More
IPR000683   Oxidoreductase_N       
IPR004104   OxRdtase_C       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

H9J2C1   A0A194PNI9   S4P4A7   A0A2A4J2T5   A0A2W1BXA3   A0A2W1BRW6   + More
A0A2A4J2U8   A0A194QYM0   A0A2A4K2G4   A0A2H1VG95   A0A212FM46   A0A067QX71   A0A1B0GPG9   A0A0K8TTM1   A0A1L8E2I1   A0A1L8E212   A0A1A9XN38   W8BTQ4   A0A1B6CSQ0   A0A1A9W5F5   A0A1Y1M984   A0A1B0AT96   A0A1A9ZJG4   A0A1A9UMK4   A0A034WTE5   A0A1B6EK94   A0A1B6GV24   A0A0A1X461   A0A1B0F9J8   A0A2J7RKP2   A0A0K8W9S1   U5EL44   A0A1B6HVU3   A0A1I8M199   A0A151IMP4   A0A195EL60   A0A1Q3FQ73   A0A1I8NNZ7   E2AXQ4   B0X5Q2   A0A158NPM5   A0A151WJ49   A0A026W2Y1   T1GXU5   A0A0L0BSW4   A0A195AT36   B3MPI9   F4W7M8   A0A1W4WJX5   A0A1W0WMJ2   A0A195ETJ0   D6W762   A0A1W4UTW9   A0A1S4FP90   A0A154PMX1   A0A0J9QUB3   B4I2J4   Q16UC6   Q9VQB4   A0A182GPQ0   A0A226DXU2   E9I8Q2   B3N9K5   A0A1B0CN82   A0A1B0CWQ5   E2BUF6   A0A2P6KSX1   B4MVW8   B4NWN6   A0A226E6P8   A0A3B0JHJ9   A0A182PAM0   A0A2A3EAV6   A0A1L8E1K5   A0A0J7KRK4   A0A1B6C4D3   A0A182WHA4   B4KJS8   A0A182XKT8   A0A182QP31   A0A182MC66   A0A0C9QG12   A0A182U3C8   H9K9P8   B4JQY6   A0A182I5A6   A0A182KYZ1   Q29MK9   B4G927   A0A194PQ22   A0A2M3YZS0   A0A2M3ZFV1   A0A182RG54   A0A182W8W4   A0A182VND1   A0A2M4BT72   A0A2M4BT63   A0A182PG54   A0A182MH58   A0A1Y1MRP5  

PDB

3OHS     E-value=5.38775e-56,     Score=550

KEGG

101744141    K00078 dihydrodiol dehydrogenase / D-xylose 1-dehydrogenase (NADP) [EC:1.3.1.20 1.1.1.179] | (RefSeq

PATHWAY

00040    Pentose and glucuronate interconversions - Bombyx mori (domestic silkworm)
00980    Metabolism of xenobiotics by cytochrome P450 - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016491   GO:0000387   GO:0005681   GO:0016021   GO:0004888   GO:0007166   GO:0045211   GO:0006281   GO:0048384  

Length:

336

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0550700000000001

Exp number, first 60 AAs:

0.00075

Total prob of N-in:

0.03496

outside

1  -  336

 

 

Pi

159.079844

Theta

179.306135

Tajima's D

-0.755475

CLR

0.652835

CSRT

0.188340582970851

Interpretation

Uncertain