Silkworm Genome Informatics Database

Gene

KWMTBOMO02873 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003660

Annotation

PREDICTED:_uncharacterized_protein_LOC106140166_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr5(-):13005201-13024003 View in EpiBrowser

Location in the cell

Extracellular Reliability : 2.455

CDS

ATGCAGTTCTTCTTGACATCATGTCTCGTGCTGCTCGCAGCTTCCCTCGGCCCAGCCGCAGCTCAAAGAATAACAACGATACAACTGGATGGCGTTCAGTATTTTATCTCTAGGATGAATCCGTACAGCCCAGAGCTCAACTATTTCCTGTCCTATCAGTACTGCAGATCATTAGGTCTTCAACTGGCATCGTTCGAGACGAAGGAGAAGGCAGATTCGATAACGACTTATCTAACAAATGCAGGTTACAACAAATATGACTTCTGGACATCGGGTAATAACCTCGGCACAGACATGTTTTTGTGGATGAGCACCGGTCTGCCATTTAATGCGACTTTTAACTACATGCGGAGACTGCCCATCGATGCTCCTGCCCAGCATGCTGATGACAGCATGGACCCTCTAGACGTACCACAAGGAAGCACTGCTCCACAACGCACCGCCCGACATGGGACGGAACACGTCATGACTAATGGCTGCATCGCGCTCAAAGCTCCGACCTTCCACTGGGAGCCTCAACACTGCGGCGAGATCAAGGACTTCATATGCGAGCAGACGCGTTGCTATTACTACAACTACGGCTCGATTCCCGTTTCATCCGCGCAGGGAAAGCCGCTATCGCTGACGACGACGACGACCGCCCACCCAATCACGTCGTCCTCGCCACCGCCACCGCGCTCCGAGCACCTGCCGACCCACTTCAACCTTAACAATCTCATCGGCAAGCTGCGACCTTCTTCCCTTGACGGCCTCCAGTCTGCACACCTCAAGACTAGCGCCTTGTTCAAATCCCCACCGCAAATCGACTCCCACTATTCGCGAGCTGCGGACGCTCATTCCCGCGATCACGACCAGGACCAGAAGGAAGAACCCACTCAGGGTCCGTACGAAGATGATGAGGGTATGGTGGGAGACGATCCGGCCGCGTATCTGACTAACGAGGCTCACGACGCTCCCGTTGGAGACGAGATCGCATCGACTGCCGAGCCGGACGCCACCGAGCACTCCGTCCACGCCAGCGGCATGTTGGCGCCCCCCGCTTATTAA

Protein

MQFFLTSCLVLLAASLGPAAAQRITTIQLDGVQYFISRMNPYSPELNYFLSYQYCRSLGLQLASFETKEKADSITTYLTNAGYNKYDFWTSGNNLGTDMFLWMSTGLPFNATFNYMRRLPIDAPAQHADDSMDPLDVPQGSTAPQRTARHGTEHVMTNGCIALKAPTFHWEPQHCGEIKDFICEQTRCYYYNYGSIPVSSAQGKPLSLTTTTTAHPITSSSPPPPRSEHLPTHFNLNNLIGKLRPSSLDGLQSAHLKTSALFKSPPQIDSHYSRAADAHSRDHDQDQKEEPTQGPYEDDEGMVGDDPAAYLTNEAHDAPVGDEIASTAEPDATEHSVHASGMLAPPAY

Uniprot

H9J2C3 A0A2A4K2V0 A0A2W1BTN3 A0A212FLY5 A0A194QT39 A0A0L7LFW0 + More
A0A194PNV3 A0A2H1VJV2 D6W6W7 A0A1Y1LIU2

Pubmed

19121390 28756777 22118469 26354079 26227816 18362917 + More
19820115 28004739

EMBL

BABH01007676 BABH01007677 BABH01007678 BABH01007679 NWSH01000238 PCG78103.1 + More
KZ149903 PZC78428.1 AGBW02007682 OWR54764.1 KQ461150 KPJ08688.1 JTDY01001263 KOB74347.1 KQ459597 KPI94992.1 ODYU01002952 SOQ41103.1 KQ971307 EFA11606.1 GEZM01056247 JAV72758.1

Proteomes

UP000005204 UP000218220 UP000007151 UP000053240 UP000037510 UP000053268 + More
UP000007266

PRIDE

H9J2C3

Pfam

PF00059 Lectin_C

Interpro

IPR016187   CTDL_fold        + More
IPR016186   C-type_lectin-like/link_sf
IPR001304   C-type_lectin-like

SUPFAM

SSF56436 SSF56436

Gene 3D

3.10.100.10

ProteinModelPortal

H9J2C3 A0A2A4K2V0 A0A2W1BTN3 A0A212FLY5 A0A194QT39 A0A0L7LFW0 + More
A0A194PNV3 A0A2H1VJV2 D6W6W7 A0A1Y1LIU2

KEGG

101744379 no KO assigned | (RefSeq) uncharacterized LOC101744379

GO

GO:0030246

SignalP

Position: 1 - 21, Likelihood: 0.999138

Length:

348

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.57902

Exp number, first 60 AAs:

1.50993

Total prob of N-in:

0.07457

outside

1 - 348

Pi

317.456072

Theta

199.297234

Tajima's D

1.572995

CLR

0.323066

CSRT

0.804659767011649

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
23174119	-.FFTVSELGSR.-	96.67	3e-14
26822097	ADSITTYITNAGYNK	100.00	1e-12
26280517	APNQENVFVDVAEQIR	100.00	1e-12
25044914	APQPQPQQQIEQQPQAQQAK	100.00	1e-12
28467696	APTATPIIQTATASQVTSK	100.00	1e-12
29197581	APTFHWEPQHCGEIK	100.00	1e-12
31250652	NNFFYKNDAFLGADEDADYEIYTGSKNENEEKDLPKRARSIAELEEKLEKLKSQQKHNLKTKLVKKSLNSKLNKKIKKKERLNKTKKLNIDKSLLEDENNQIEQKHKISAPKPVFNTDAKLVFSKFNFDNFGNKGN	100.00	1e-12
29197581	ADSITTYITNAGYNK	100.00	7e-06
28467696	CYYMTQR	100.00	1e-05
29197581	HGTEHVMTNGCIAIK	100.00	1e-05

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics