Silkworm Genome Informatics Database

Gene

KWMTBOMO02859

Pre Gene Modal

BGIBMGA006778

Annotation

PREDICTED:_uncharacterized_protein_LOC106131999_isoform_X2_[Amyelois_transitella]

Location

Bomo_Chr5(+):12784374-12788605 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.384

CDS

ATGGTAGAGAGCCAGGAGGTGCTTTCCCATTTAATAGGAAAGCGTCGTTACGTCAAAGGCTCACTTACAAGACTCTATAACCAGTTGGGAGAAACCGAAAGACTGTCTACGGAAACTATACAATGCCGCTTAGAGCGTTGTGTTGTAGCGTTCCGCAAATACGGCGATTATTGCGGCCGAATTCTGGCAACTAACCCGGCTGATGAAGAGGACTCAGGTGAGTACGATGACAAATATTTTGGCATCATGGCTTGCTACCAAGCTGAGCTTAACAAGCGAAAGGCCAATGCTCCGCCTAATCCGACACCCCAAAAAAGGCTTATAAAGTTACCTACCATAGAAATGCCGCAGTTCACGGGTCAATATTCGAAATATATCACATTTAGAGAAATGTTCAAATCAGTTATCGAAAATGATGTTTCTTTAGATGACATTCAAAAACTGCATTATTTGCGATCATTTTTAAAGGAAGAACCTTTAGATTTAATAATTAATTTGCCTCTTATAGGGTCCAGCTTCAAGGAAGCTCTGAGGTTACTGGACCAGAGATATTATAATAAATATAATATAATGACAGAGCTTTTATCTACATTGCTAGATCTAGATGTTATTAGTAAACCTTCTCCTAGCAATATAAGACATTTTGTGTCAACAATTAAACAAACGTTGGCTGCCCTCAAAAATATGGAGGCGAAGGTAGATGAATGGGATCCAATTTTAATGTTGATTTTGACCCGCAAGTTAGATGAACGTACAGCACGCGAATACCAACTGGATCGGGACAACACAATGGACCCCACTGTGGACCAGCTTCTAGCGTTCCTTGAAAAAAGAGCGCTCGCTATGGAGAATGCTGGACAATCCGCAGCCAAGTTGTTTACCACCAAAGTAGTCAACGCAGTGACCGCTAAGGAGAAGCGAGAATGTTACTTCTGTAAGTCAGTTGAACATAAGATTTATAACTGCAAAAATTTCAAACTTCTGCCTTCAGCGGAGAGAATATCTTTTGCACAAAAAAATGAGCTGTGCAATATATGTTTGAACAAACATCCAGGCAAGTGTAGGTTCTATTTTCGATGTAGTACATGCAAAAAAGGGCATCATTCATTGCTGCATCGCGAGGAAGAAAAGGCTGAAGCCGTTATTATGTTGTCTGGCAATAATGATAATAATGTTCTGATTCCCACAGCTCGCATAAAGGTCTTCAGCAGTGATGGCAGGGAGGTGCGCATAAAGGCCATACTGGACTCCGCCTCTCAAGCTTCACTTATCACTACTAAGGCATTGAAGGTTTTAGGTTTGACTCCTAAGCGAGACAGTACTAATATTATAGGGGTCACGAATAACAAAAACCAAGTTCATTATTCTGTACCAATAGAAGTTCACTCGATGAAAACCCCATTCAAGGTTTCCATGAATTGTCATGTAGTGGACACGATAACATGCAAATTGCCACAGACCCCGATAGACCCATCCACAGTAGTTGTTCCAAAAAATATTCAGCTGGCCGATGATGAGTTTTATAAACCATCTGAGATTAATATGCTAATTGGAGCCAGTGTATTTTTTCAGGCACTGCTACCGGCGACGACCAACTCTACGTGCGCGACGCGCCGCCAGCCTCCAGTCGACCCGGCCAGCCAGAGTAAAGGAACGCCACAGATTATCAACACTAAATTTGGTCACATTATCGCGGGTGGTCTGCCACCTCAACATGAGGTAACGAAAATTGTTTCACTTTTATGTACATGTGAATCTGACATTGCTACTACCATAACTAAGTTCTGGGATACCGAAAAGGTTCCAGAAGCATTCCTAGAAAAGGATGCTGAGCATGACATAGTCGAGAATAACTTTAAGGCCACAGTTCAACTTTCGAATCATAGATTTCAAGTGGATTTGCCACTAAAGGTTCCCCTAAACGAGGTCAATGCGACATTAGCTTCCTTCATTATAAAGAATTGTGTTTATGTTGATGATGTTTTATATTCGGATAACGATTTAACGGCTTTACATGAGGCGAAACAGCAGCTAAAACGTTTGTTAAGCTTGGGTGGCTTCCAAATGCATAAATGGTCGTCTAACTGCGATGAGATATTAGTTGATATTCCTTTCAATGAGAGACAGTTAGATGAAATTGAAGTTCAAAAAGAAAACAGCAGTATCAAGGCCCTAGGAATGACAATTGACGCAAAGAAAGATTGTTTTGTCATTAAATGCCCAAATAACTTTTCATTAAATTCTATATCAAAACGACAGATATTGAGTGACATTGCCAAATTATACGATCCTCTAGGCTTTGTCAGTCCGATTATAGTAAAGGCTAAGGTGATCATGCAGAGACTGTGGTGCGAGAAAGTGGACTGGGATGCTTGTCCACCACCGCAGGTAAGAGAGGAATGGACTGATTTTGCTACCAGCTTAGCGCAAATGGAACCTATATATTTGCAAAGAAACATTCAGGTCCCTGACGACGCCGAAGCAGTACAGATCGTCGGCTTCGCCGACGCTTCCAGCTCCACAGGCTACGGGGCTTGCTTATATCTGCGCGTAATAGATAAAGCAGGTAAAGTGACTGTCTCTTTACTCTGTTCGAAGTCTAGAATCAATCCGCGTAAGAAGTCTTTAACGGTTCCTAGGCTTGAATTAAACGCTATGCTGCTATTAGCAAAACTTACAGCCAAAATGTATGACACTCTCAAAATTAAAATTAAAATTGATGATGTTATTTTATTTTCTGATTCACAAATAGCTTTAGCATGGGCTCACACAGAAATTACTAAATTGCAAGCATATGTGGCGAACAGAGTAAAAGTAGTACAGCAGTTGACCAATAGATGGCACTGGGGATACGTCAGCACCCATGAGAATCCCGCAGATTACATAAGTCGAGGGCTGGGTCCACCAGAACTTCATTCCTGCTCTATGTGGTGGGACGGGCCTGAGTTCCTGCATAAAAGGGAGTATACATTTGGTCAAAACATACTGAAAGAAAACGCGGACAATCTACCCGAGATGAAGACAGCTCCTGTTGCATCCACGTCCGCTGGTGTTATATTACTCACTCTGAAACAAAAAGAAATCTCACATATGTTAGAAAAATATTCTGATATCAATAAAATGACACGAGTTTTGGCGTACATTTTACGTTTTTGTCATAACAGCAAACCTAACAATATTAAAATACAAACTAGTTATTTACATAGTAAAGAACTCGAGCGATCTTTATCTTTATTGATTAAGCATGAACAAAAATATTACTTCAGTAAGGAATTAAGCTTACTGCGAACAGGTGAGAATATTAAGGGCCCTCTGAAACCTTTGCATCCATTTATTGATGACCAAGGTTTGTTACGTGTTGGGGGAAGGTTGCAAAATGCTTCTATTTCGTATAATCAAAAGCATCCTATGATCCTTCCGAAGGGTTCCAAGCTAACCGACCTTATTATTTCGCGAGAGCACCTCAGACTCCTTCATGCTGGTCCCAAGTTATTGCTGGTGTTATATTACTCACTCTGA

Protein

MVESQEVLSHLIGKRRYVKGSLTRLYNQLGETERLSTETIQCRLERCVVAFRKYGDYCGRILATNPADEEDSGEYDDKYFGIMACYQAELNKRKANAPPNPTPQKRLIKLPTIEMPQFTGQYSKYITFREMFKSVIENDVSLDDIQKLHYLRSFLKEEPLDLIINLPLIGSSFKEALRLLDQRYYNKYNIMTELLSTLLDLDVISKPSPSNIRHFVSTIKQTLAALKNMEAKVDEWDPILMLILTRKLDERTAREYQLDRDNTMDPTVDQLLAFLEKRALAMENAGQSAAKLFTTKVVNAVTAKEKRECYFCKSVEHKIYNCKNFKLLPSAERISFAQKNELCNICLNKHPGKCRFYFRCSTCKKGHHSLLHREEEKAEAVIMLSGNNDNNVLIPTARIKVFSSDGREVRIKAILDSASQASLITTKALKVLGLTPKRDSTNIIGVTNNKNQVHYSVPIEVHSMKTPFKVSMNCHVVDTITCKLPQTPIDPSTVVVPKNIQLADDEFYKPSEINMLIGASVFFQALLPATTNSTCATRRQPPVDPASQSKGTPQIINTKFGHIIAGGLPPQHEVTKIVSLLCTCESDIATTITKFWDTEKVPEAFLEKDAEHDIVENNFKATVQLSNHRFQVDLPLKVPLNEVNATLASFIIKNCVYVDDVLYSDNDLTALHEAKQQLKRLLSLGGFQMHKWSSNCDEILVDIPFNERQLDEIEVQKENSSIKALGMTIDAKKDCFVIKCPNNFSLNSISKRQILSDIAKLYDPLGFVSPIIVKAKVIMQRLWCEKVDWDACPPPQVREEWTDFATSLAQMEPIYLQRNIQVPDDAEAVQIVGFADASSSTGYGACLYLRVIDKAGKVTVSLLCSKSRINPRKKSLTVPRLELNAMLLLAKLTAKMYDTLKIKIKIDDVILFSDSQIALAWAHTEITKLQAYVANRVKVVQQLTNRWHWGYVSTHENPADYISRGLGPPELHSCSMWWDGPEFLHKREYTFGQNILKENADNLPEMKTAPVASTSAGVILLTLKQKEISHMLEKYSDINKMTRVLAYILRFCHNSKPNNIKIQTSYLHSKELERSLSLLIKHEQKYYFSKELSLLRTGENIKGPLKPLHPFIDDQGLLRVGGRLQNASISYNQKHPMILPKGSKLTDLIISREHLRLLHAGPKLLLVLYYSL

Uniprot

J9LMH1 A0A2H1VXK6 A0A1B0D8P4 A0A182YRW0

Pubmed

25244985

EMBL

ABLF02018226 ABLF02057633 ODYU01005059 SOQ45565.1 AJVK01027627

Proteomes

UP000007819 UP000092462 UP000076408

Pfam

PF05380   Peptidase_A17        + More
PF12017   Tnp_P_element
PF03564   DUF1759
PF18701   DUF5641
PF12259   Baculo_F
PF05585   DUF1758

Interpro

IPR008042   Retrotrans_Pao        + More
IPR021896   Transposase_37
IPR006612   THAP_Znf
IPR005312   DUF1759
IPR022048   Envelope_fusion-like
IPR008737   Peptidase_asp_put
IPR040676   DUF5641
IPR021109   Peptidase_aspartic_dom_sf

SUPFAM

SSF50630 SSF50630

Gene 3D

2.40.70.10

ProteinModelPortal

J9LMH1 A0A2H1VXK6 A0A1B0D8P4 A0A182YRW0

KEGG

101740833 no KO assigned | (RefSeq) uncharacterized LOC101740833

GO

GO:0003677 GO:0006313 GO:0004803 GO:0016021

Length:

1172

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00418

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00001

outside

1 - 1172

Pi

345.237989

Theta

205.444644

Tajima's D

2.284651

CLR

0.000048

CSRT

0.92170391480426

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics