Gene

KWMTBOMO02858

Pre Gene Modal

BGIBMGA006563

Annotation

Zinc_finger_protein_358_[Papilio_xuthus]

Location

Bomo_Chr5(-):12772657-12775133      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.001

CDS

ATGAACGATTTCGGAAATCTGGAGAAAATCATTGTACGTGAACTGTCCTGCCGTTTGTGTCTTTGTACTGATGTAGTGAAACTCAAACCTCTCAGCAATGAAGTAAAGAGAAAACTCAAGAGGTTATTCGATATAACAGTTAGAGCAGACGACAACCTACCCAAGGCAATATGCCACGATTGCCTGCAACAAGTTTCAACTCTACATTTGTATGCCGTGAAAGTAGAAAAAACCCAAAAATTCTTAGAGTTTCATAAACAAAAATCAAAAGGTGAAAAACAAGATGGCACAACAAATAAAATGACACCATTAATAGGAGCACTCTCAGTCGAAGATTTAAAACAATCTAATAAAAATTCCGAGACAGCTAAATCAAGTCCCTCGCCAGAACGACAGCATGGAGACACAAAAATATCTAAACAAAAACCTGTTCAGCCTGTTCTCAAAAAATCTCCTTTGGACATGAAGCTAATGGAAGCCATGTCACTCGATGAATTTGCGATTACTGAAAAAGTTGATAAAAATCTCTTAGGTACAAGTCCAAAAAACAGGCTTTCTCCCATCATAAGAACTAAAATAGTGAAACAAAATAGTCCGAAAGCTGAGCATCTTGAAATCGGCAATAGCACATTAGACCCTGTGGTTCTAATAGATGGAAAACCTGCCAAACAAGGCTCCGCTTTGGATAAACAAATAACGCTCTTTTACAAAATGGAGTGCTGTGTGTGTCATGAGAGTGGTTTCAATTTTAGATCTCTGATGAAACATTATAAAGATAGACATGGTGTTCCCGGTTATGTTACATGTTGTGAAAAGAAATTCCACTACTTTTATCCCAAGAAAATTATCGAGCACATGGCTTATCATCTACAGCCAAACATTTTTATGTGTCCAAGTTGTCACCATAATTTCCAAACGTCACAAGAACTATCAGAACATCAAAGCAACGGTGGTCGGTCTGAAGGAAAAATAATATGCCCAAGATGTACAGAACGGTACCCTACTTACCGCGAATTAGGATGTCATATAATCACACACAGGACTGAGAGATTGCAGTGCGATTATTGTGGCAAATTTTTAAAACATCACCACCGCAAAAAGACTATAAATCACATGGAAGACGTAATATTGTGTTCGCAGTGCACACGATCACTGAAAAACATTGATAAACAGGAAAAAGAAAATAAAGATAAAACGAAAGCAAAAATCAGTGAAGCAACGTTGCAAAAGTATCAAAAGTTCAGACAAGCAATGGGACTCTCTGGTGACGAAGACGGATCTACCGACTAG

Protein

MNDFGNLEKIIVRELSCRLCLCTDVVKLKPLSNEVKRKLKRLFDITVRADDNLPKAICHDCLQQVSTLHLYAVKVEKTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQPVLKKSPLDMKLMEAMSLDEFAITEKVDKNLLGTSPKNRLSPIIRTKIVKQNSPKAEHLEIGNSTLDPVVLIDGKPAKQGSALDKQITLFYKMECCVCHESGFNFRSLMKHYKDRHGVPGYVTCCEKKFHYFYPKKIIEHMAYHLQPNIFMCPSCHHNFQTSQELSEHQSNGGRSEGKIICPRCTERYPTYRELGCHIITHRTERLQCDYCGKFLKHHHRKKTINHMEDVILCSQCTRSLKNIDKQEKENKDKTKAKISEATLQKYQKFRQAMGLSGDEDGSTD

Uniprot

A0A212F1B4   A0A194PPT5   A0A194QYN3   A0A2H1W8E5   A0A2W1C0B5   A0A0L7K3Q6   + More
A0A182W3M7   A0A336N6E3   A0A182RN48   Q16IT1   A0A182GKR3   Q7PIS9   A0A182KA93   Q7Q764   A0A182VGD2   A0A084W2X1   A0A2M4BJR7   A0A2M4BJT3   A0A182YK06   A0A182M6L1   A0A084W2X0   A0A182N9S8   A0A182QAG4   A0A182WVR4   A0A182NM80   A0NED4   A0A182UEY4   A0A1I8JTE4   W5JT42   A0A182FFB5   A0A084W2W7   A0A182FT26   A0A182JY47   A0A1I8JW62   A0A182PN78   A0A182LJM8   A0A1I8MZK2   A0A182LJM3   A0A182HZC4   A0A182RN49   A0A182JFW9   Q7PH83   A0A182H5I8   W5JQ41   A0A1B0CLJ3   A0A182KXJ0   A0A182WQS8   W5JUM8   A0A182MDL0   A0A1J1HUC3   A0A084W2W6   A0A182QVB5   A0A182SB09   A0A182RDX8   A0A084WT60   A0A2M4BIH1   A0A182WQM0   A0A182M3E2   A0NED7   A0A182R8M7   A0A1B0CLJ1   A0A182Y0W1   A0A0J9RFX5   B3NKA1   A0A182FKQ3   B0X9L7   A0A1B0CLJ2   A0A1B0DE08   B4MJZ9   A0A1B0GKI9   B4HP04   B0WFL9   A0A182HM38   A0A182ISK1   A0A1I8Q095   A0A1B0GQ35   A0A1W4UAF8   Q17IT3   A0A1I8Q6K9   A0A182WKR3   A0A1B0CWN9   Q16IT8   A0A1I8Q076   A0A0K8U7S5  

Pubmed

22118469    26354079    28756777    26227816    17510324    26483478    + More
12364791    14747013    17210077    24438588    25244985    20920257    23761445    20966253    25315136    22936249    17994087   

EMBL

AGBW02010901    OWR47535.1    KQ459597    KPI94983.1    KQ461150    KPJ08696.1    + More
ODYU01006692    SOQ48764.1    KZ149903    PZC78416.1    JTDY01011568    KOB55526.1    UFQS01002855    UFQT01002855    SSX14766.1    SSX34158.1    CH478054    EAT34182.1    JXUM01070470    KQ562608    KXJ75491.1    AAAB01008960    EAA44029.2    EAA11184.3    ATLV01019715    KE525278    KFB44565.1    GGFJ01004178    MBW53319.1    GGFJ01004179    MBW53320.1    AXCM01000793    KFB44564.1    AXCN02001643    EAU76453.1    APCN01004336    ADMH02000446    ETN66448.1    ATLV01019714    KFB44561.1    APCN01005540    AAAB01008888    EAA44649.2    JXUM01026476    KQ560757    KXJ81003.1    ADMH02000430    ETN66522.1    AJWK01017377    AJWK01017378    ETN66449.1    CVRI01000021    CRK91671.1    ATLV01019713    KFB44560.1    AXCN02000940    ATLV01026859    KE525420    KFB53404.1    GGFJ01003709    MBW52850.1    AXCM01015398    EAU76456.2    CM002911    KMY94923.1    CH954179    EDV55123.1    DS232542    EDS43219.1    AJVK01032432    CH963846    EDW72438.1    AJWK01028972    CH480816    EDW48506.1    DS231919    EDS26325.1    APCN01004337    AJVK01067408    CH477237    EAT46555.1    AJWK01032721    EAT34175.1    GDHF01029924    JAI22390.1   

Proteomes

UP000007151    UP000053268    UP000053240    UP000037510    UP000075920    UP000075900    + More
UP000008820    UP000069940    UP000249989    UP000007062    UP000075881    UP000075903    UP000030765    UP000076408    UP000075883    UP000075884    UP000075886    UP000076407    UP000075902    UP000075840    UP000000673    UP000069272    UP000075885    UP000075882    UP000095301    UP000075880    UP000092461    UP000183832    UP000075901    UP000008711    UP000002320    UP000092462    UP000007798    UP000001292    UP000095300    UP000192221   

Pfam

PF07776   zf-AD        + More
PF00096   zf-C2H2
PF10501   Ribosomal_L50
PF16622   zf-C2H2_11

Interpro

IPR013087   Znf_C2H2_type        + More
IPR039970   TF_Grauzone       
IPR012934   Znf_AD       
IPR036236   Znf_C2H2_sf       
IPR018305   Ribosomal_L50_mt       
IPR036280   Multihaem_cyt_sf       
IPR041697   Znf-C2H2_11       

SUPFAM

SSF57667   SSF57667        + More
SSF48695   SSF48695       

ProteinModelPortal

A0A212F1B4   A0A194PPT5   A0A194QYN3   A0A2H1W8E5   A0A2W1C0B5   A0A0L7K3Q6   + More
A0A182W3M7   A0A336N6E3   A0A182RN48   Q16IT1   A0A182GKR3   Q7PIS9   A0A182KA93   Q7Q764   A0A182VGD2   A0A084W2X1   A0A2M4BJR7   A0A2M4BJT3   A0A182YK06   A0A182M6L1   A0A084W2X0   A0A182N9S8   A0A182QAG4   A0A182WVR4   A0A182NM80   A0NED4   A0A182UEY4   A0A1I8JTE4   W5JT42   A0A182FFB5   A0A084W2W7   A0A182FT26   A0A182JY47   A0A1I8JW62   A0A182PN78   A0A182LJM8   A0A1I8MZK2   A0A182LJM3   A0A182HZC4   A0A182RN49   A0A182JFW9   Q7PH83   A0A182H5I8   W5JQ41   A0A1B0CLJ3   A0A182KXJ0   A0A182WQS8   W5JUM8   A0A182MDL0   A0A1J1HUC3   A0A084W2W6   A0A182QVB5   A0A182SB09   A0A182RDX8   A0A084WT60   A0A2M4BIH1   A0A182WQM0   A0A182M3E2   A0NED7   A0A182R8M7   A0A1B0CLJ1   A0A182Y0W1   A0A0J9RFX5   B3NKA1   A0A182FKQ3   B0X9L7   A0A1B0CLJ2   A0A1B0DE08   B4MJZ9   A0A1B0GKI9   B4HP04   B0WFL9   A0A182HM38   A0A182ISK1   A0A1I8Q095   A0A1B0GQ35   A0A1W4UAF8   Q17IT3   A0A1I8Q6K9   A0A182WKR3   A0A1B0CWN9   Q16IT8   A0A1I8Q076   A0A0K8U7S5  

PDB

2I13     E-value=0.00787859,     Score=93

KEGG

101741589    no KO assigned | (RefSeq) zinc finger protein weckle-like

GO

GO:0005634   GO:0008270   GO:0003700   GO:0003676   GO:0005739   GO:0016021   GO:0046872   GO:0016020   GO:0006241   GO:0030286   GO:0005216   GO:0045211   GO:0006281   GO:0048384  

PANTHER

PTHR23225  

Length:

429

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00324

outside

1  -  429

 

 

Pi

239.218977

Theta

223.560788

Tajima's D

0.297198

CLR

0.01328

CSRT

0.453877306134693

Interpretation

Uncertain