Gene

KWMTBOMO02853  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003527

Annotation

PREDICTED:_HD_domain-containing_protein_2_[Papilio_machaon]

Location

Bomo_Chr5(+):12730584-12737732      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.853

CDS

ATGGAAAATTCGAAAATATTGGAATTTTTGGAATTGGTAGGGCGCCTTAAGCATGTCAAAAGAACGGGTTGGATCCTCTGTGATATTAATGATTGTGAGACAATAGCCGGCCACATGTACAGGATGGGAATCATGACATTCTTACTAACAGAAGAAAATAATCCTACTAAATTGGACAGAATAAAATGTCTTCAAATAGCTCTCATTCACGACTTGGCTGAGTGCATTGTTGGAGACCTCACACCTCACTGTGGAGTGAGTCCTGAAGAAAAACACAGAAGAGAAGATGAGGCCATGAAGACAATTTCAGGACTAACTGGAATTGCTGGTGATAGAATGTATGAATTATACAAAGAATACGAAGACCAAAGTTCACCTGAGGCTAAATTTGCTAAAGACTTGGACCGTTATGATATGATCCTACAAGCATTTGAGTACGAAAAACGTGAAAATACTCCAAAGAAATGTCAAGAGTTCTTTACTGCAACAGAGGGAAAATTTGACCACCCGTTTATACAAGATTTAGTCAAAGAACTGTACTTGCAAAGAGAAATCTTTGAGAAACATACCGTTGTCAATGGTCATGTGTAA

Protein

MENSKILEFLELVGRLKHVKRTGWILCDINDCETIAGHMYRMGIMTFLLTEENNPTKLDRIKCLQIALIHDLAECIVGDLTPHCGVSPEEKHRREDEAMKTISGLTGIAGDRMYELYKEYEDQSSPEAKFAKDLDRYDMILQAFEYEKRENTPKKCQEFFTATEGKFDHPFIQDLVKELYLQREIFEKHTVVNGHV

Uniprot

A0A2W1BHG2   A0A2H1VYV3   S4PWQ0   A0A2A4JMR2   I4DPG4   A0A194QUP6   + More
A0A1E1WGG0   A0A212EJY2   H9J1Z0   A0A0L7L622   A0A2P8YH97   A0A2J7RPG1   A0A067QXC1   A0A336LMJ8   A0A1B6J221   A0A310S593   A0A088AP73   A0A232EKG7   V9IC55   A0A1B6ENZ0   A0A1B6CYP5   A0A1B6L7V9   K7JAD3   A0A0M8ZY89   A0A1Q3FXI2   E0VUU7   Q16R43   E2C1G7   Q16R44   J3JY32   A0A182GZ62   A0A023ELR5   N6UCA3   A0A0K8TMB7   A0A1L8DAW6   B4M9P9   B4KEY8   A0A0M4ECW5   B4JP55   B3MM87   A0A2A3EQR9   A0A195B6N8   A0A158NQK2   B4N0A3   A0A1I8PWY7   A0A026WRH2   T1PDD0   B4GJ32   A0A3B0JMH1   Q29JV3   A0A1B0FY70   A0A1W4UNT7   A0A1W4UNL0   A0A224XLH1   A0A1B0CQ70   B4HXU7   B4Q4Y8   B4P0B3   B3N5T8   A0A195ESN9   Q9VMB3   A0A182YIM9   Q8IGQ9   A0A1I8N3T4   D3TNP8   F4WCI7   A0A069DWR2   A0A195C4H9   A0A182P7T1   A0A151XBM3   A0A0L0CLA1   A0A0N8ASS4   A0A182SA78   A0A0J7KV85   A0A0L7QNI9   A0A084WG96   A0A182QSU7   E9IUH6   A0A2M4C0F1   E9H2B2   A0A182M1H0   Q7QN96   A0A182HQW4   A0A2L2YLM4   A0A182XB75   A0A1A9W3W8   A0A0A1X749   A0A1A9UTV8   A0A0P6I391   A0A1B0ESY6   A0A1A9ZHU0   Q7Q0V1   A0A1J1HRX4   A0A2L2YLL0   A0A034VBH8   A0A182WA43   A0A1B0BVK1   A0A1A9YC59   W8BJ31   A0A0C9PQ10  

Pubmed

28756777    23622113    22651552    26354079    22118469    19121390    + More
26227816    29403074    24845553    28648823    20075255    20566863    17510324    20798317    22516182    23537049    26483478    24945155    26369729    17994087    18057021    21347285    24508170    30249741    15632085    22936249    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25244985    25315136    20353571    21719571    26334808    26108605    24438588    21282665    21292972    9087549    12364791    14747013    17210077    26561354    25830018    25348373    24495485   

EMBL

KZ150123    PZC73145.1    ODYU01005295    SOQ46011.1    GAIX01006403    JAA86157.1    + More
NWSH01002754    NWSH01001079    PCG67570.1    PCG72723.1    AK403586    KQ459597    BAM19804.1    KPI94979.1    KQ461150    KPJ08700.1    GDQN01004960    JAT86094.1    AGBW02014356    OWR41822.1    BABH01007715    JTDY01002667    KOB70978.1    PYGN01000596    PSN43630.1    NEVH01001360    PNF42721.1    KK852854    KDR15029.1    UFQT01000047    SSX18945.1    GECU01014481    JAS93225.1    KQ770827    OAD52577.1    NNAY01003794    OXU18856.1    JR039356    AEY58655.1    GECZ01030109    JAS39660.1    GEDC01029972    GEDC01026810    GEDC01018754    GEDC01002666    JAS07326.1    JAS10488.1    JAS18544.1    JAS34632.1    GEBQ01020168    JAT19809.1    AAZX01005687    AAZX01014581    KQ435796    KOX73540.1    GFDL01002883    JAV32162.1    DS235793    EEB17153.1    CH477725    EAT36866.1    GL451937    EFN78143.1    EAT36867.1    BT128156    KB632333    AEE63117.1    ERL92693.1    JXUM01021775    JXUM01021776    KQ560611    KXJ81631.1    JXUM01015606    JXUM01015607    JXUM01015608    GAPW01003390    KQ560434    JAC10208.1    KXJ82435.1    APGK01035310    KB740923    ENN78261.1    GDAI01002322    JAI15281.1    GFDF01010471    JAV03613.1    CH940654    EDW57925.1    KRF78027.1    CH933807    EDW11957.1    KRG02998.1    CP012523    ALC39015.1    ALC39535.1    CH916372    EDV99480.1    CH902620    EDV31847.1    KPU73655.1    KPU73656.1    KPU73657.1    KZ288193    PBC34030.1    KQ976582    KYM79849.1    ADTU01001829    CH963920    EDW77516.1    KK107119    QOIP01000009    EZA58573.1    RLU18584.1    KA646694    AFP61323.1    CH479184    EDW37346.1    OUUW01000006    SPP81522.1    CH379062    EAL32858.2    AJVK01031340    GFTR01003090    JAW13336.1    AJWK01023182    CH480818    EDW51877.1    CM000361    CM002910    EDX03980.1    KMY88551.1    CM000157    EDW87871.1    KRJ97468.1    KRJ97469.1    CH954177    EDV59097.1    KQ981979    KYN31265.1    AE014134    AAF52408.1    AAN10588.1    AAN10589.1    BT001654    AAN71409.1    EZ423050    ADD19326.1    GL888070    EGI68167.1    GBGD01003120    JAC85769.1    KQ978292    KYM95515.1    KQ982327    KYQ57710.1    JRES01000243    KNC33021.1    GDIP01214254    GDIQ01246467    LRGB01001005    JAJ09148.1    JAK05258.1    KZS14021.1    LBMM01002764    KMQ94402.1    KQ414860    KOC60051.1    ATLV01023493    KE525344    KFB49240.1    AXCN02001996    GL765979    EFZ15776.1    GGFJ01009631    MBW58772.1    GL732585    EFX74142.1    AXCM01015147    AAAB01002001    EAA02016.4    APCN01001605    IAAA01035273    LAA09012.1    GBXI01007727    JAD06565.1    GDIQ01009985    JAN84752.1    CCAG010003705    CCAG010003706    CCAG010003707    AAAB01008980    EAA13861.4    CVRI01000020    CRK90832.1    IAAA01035272    LAA09011.1    GAKP01019490    GAKP01019489    GAKP01019488    JAC39462.1    JXJN01021342    GAMC01009562    GAMC01009561    JAB96993.1    GBYB01003283    JAG73050.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000007151    UP000005204    UP000037510    + More
UP000245037    UP000235965    UP000027135    UP000005203    UP000215335    UP000002358    UP000053105    UP000009046    UP000008820    UP000008237    UP000030742    UP000069940    UP000249989    UP000019118    UP000008792    UP000009192    UP000092553    UP000001070    UP000007801    UP000242457    UP000078540    UP000005205    UP000007798    UP000095300    UP000053097    UP000279307    UP000008744    UP000268350    UP000001819    UP000092462    UP000192221    UP000092461    UP000001292    UP000000304    UP000002282    UP000008711    UP000078541    UP000000803    UP000076408    UP000095301    UP000007755    UP000078542    UP000075885    UP000075809    UP000037069    UP000076858    UP000075901    UP000036403    UP000053825    UP000030765    UP000075886    UP000000305    UP000075883    UP000007062    UP000075840    UP000076407    UP000091820    UP000078200    UP000092444    UP000092445    UP000183832    UP000075920    UP000092460    UP000092443   

PRIDE

H9J1Z0    Q9VMB3    Q8IGQ9   

Pfam

PF13023   HD_3

Interpro

IPR006674   HD_domain        + More
IPR039356   Nucleoside_monoPase       
IPR003607   HD/PDEase_dom       

CDD

cd00077  HDc

ProteinModelPortal

A0A2W1BHG2   A0A2H1VYV3   S4PWQ0   A0A2A4JMR2   I4DPG4   A0A194QUP6   + More
A0A1E1WGG0   A0A212EJY2   H9J1Z0   A0A0L7L622   A0A2P8YH97   A0A2J7RPG1   A0A067QXC1   A0A336LMJ8   A0A1B6J221   A0A310S593   A0A088AP73   A0A232EKG7   V9IC55   A0A1B6ENZ0   A0A1B6CYP5   A0A1B6L7V9   K7JAD3   A0A0M8ZY89   A0A1Q3FXI2   E0VUU7   Q16R43   E2C1G7   Q16R44   J3JY32   A0A182GZ62   A0A023ELR5   N6UCA3   A0A0K8TMB7   A0A1L8DAW6   B4M9P9   B4KEY8   A0A0M4ECW5   B4JP55   B3MM87   A0A2A3EQR9   A0A195B6N8   A0A158NQK2   B4N0A3   A0A1I8PWY7   A0A026WRH2   T1PDD0   B4GJ32   A0A3B0JMH1   Q29JV3   A0A1B0FY70   A0A1W4UNT7   A0A1W4UNL0   A0A224XLH1   A0A1B0CQ70   B4HXU7   B4Q4Y8   B4P0B3   B3N5T8   A0A195ESN9   Q9VMB3   A0A182YIM9   Q8IGQ9   A0A1I8N3T4   D3TNP8   F4WCI7   A0A069DWR2   A0A195C4H9   A0A182P7T1   A0A151XBM3   A0A0L0CLA1   A0A0N8ASS4   A0A182SA78   A0A0J7KV85   A0A0L7QNI9   A0A084WG96   A0A182QSU7   E9IUH6   A0A2M4C0F1   E9H2B2   A0A182M1H0   Q7QN96   A0A182HQW4   A0A2L2YLM4   A0A182XB75   A0A1A9W3W8   A0A0A1X749   A0A1A9UTV8   A0A0P6I391   A0A1B0ESY6   A0A1A9ZHU0   Q7Q0V1   A0A1J1HRX4   A0A2L2YLL0   A0A034VBH8   A0A182WA43   A0A1B0BVK1   A0A1A9YC59   W8BJ31   A0A0C9PQ10  

PDB

4DMB     E-value=1.81812e-33,     Score=353

KEGG

101746398    K07023 putative hydrolases of HD superfamily | (RefSeq) HD domain-containing protein 2

GO

GO:0002953  

PANTHER

PTHR11845  

Length:

196

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00195

Exp number, first 60 AAs:

0.00195

Total prob of N-in:

0.02644

outside

1  -  196

 

 

Pi

234.046185

Theta

184.41323

Tajima's D

0.749268

CLR

0.855722

CSRT

0.587220638968052

Interpretation

Possibly Positive selection