SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02852
Pre Gene Modal
BGIBMGA003664
Annotation
PREDICTED:_pancreatic_lipase-related_protein_2-like_isoform_X1_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.292
 

Sequence

CDS
ATGAATAATATTTTCGTAGCGCTAACTTCGGCTGGAACTGTGAAATGGGATGCTCCATCGCCCTATGATCCTGTGTGGCTGGCCAGTGTTCAAAAGTTCCCGCCAGCCCCTATACTGAACGACACTAGACTATGGGGCTGGGTGTACCAGCAAGATGTGGAATTCAGACTTTTTACTAGGAGAAATCCCTTTGAATATCAAGTTCTCAAAATAAATGACTCAGCGTCGCTACGAGAATCGAATTTCGATTTCAACAAAAAGGTGAAAGTGCTTACCCATGGATGGTTAAACCACGGAGACAGCCCTATGCCTGAGTCCATTAAAGAAGCATATCTAAACGTAAGCGACTTAAACATCATCGTAGTAGACTGGGGTAACGCTGCGAACGTAAACTATATTCTAGCCAGTTATAATGTCGCGGGTGTGGGTAAAATTCTGACGGATTTTCTTAATCACCTCATCGGAGAAGGAGTATCAATGAACGACGTGCACCTTATTGGACACAGCTTAGGTGCCCATGTGGTAGGAATAGCCGGGGCTTATGTGAAGAAAGGGCCTATTGATACTATCACTGGTCTGGACCCTGCATTACCTCTATTCACTTTGGGGAATAAAGATGCTCGTCTCGACAAGCATGACGCGCGACACGTGGAAGTGATCCACACTTGCGGCGGTTACCTCGGCTTCGCCTCACCCCTGGGACATATTGACTTCTATCCTAATGGAGGGACCAGGCAGCCGGGATGCGGCTTCGATTACAGAGGTCTTTGTGCACACAACCGCGCTCACATGTTCTTCTCCGAGTCCATTATATCGGACGTGCCTTTCACAGCAGTAAGATGTGAGAATTATGACGAGCTGTACTACCAGGGTTCGTGTAAGGGAACCGGTGAAAAACTTATCATGGGTGGCTTTGATATACATTACGGGAAGGATGGGATTTACTACCTCAGGACAAATGCTGAGAAACCTTACGCCTTAGGGGACTTGGACCCGACATGA
Protein
MNNIFVALTSAGTVKWDAPSPYDPVWLASVQKFPPAPILNDTRLWGWVYQQDVEFRLFTRRNPFEYQVLKINDSASLRESNFDFNKKVKVLTHGWLNHGDSPMPESIKEAYLNVSDLNIIVVDWGNAANVNYILASYNVAGVGKILTDFLNHLIGEGVSMNDVHLIGHSLGAHVVGIAGAYVKKGPIDTITGLDPALPLFTLGNKDARLDKHDARHVEVIHTCGGYLGFASPLGHIDFYPNGGTRQPGCGFDYRGLCAHNRAHMFFSESIISDVPFTAVRCENYDELYYQGSCKGTGEKLIMGGFDIHYGKDGIYYLRTNAEKPYALGDLDPT

Summary

Similarity
Belongs to the AB hydrolase superfamily. Lipase family.
Pfam
PF00151   Lipase
Interpro
IPR000734   TAG_lipase        + More
IPR029058   AB_hydrolase       
IPR013818   Lipase/vitellogenin       
IPR002331   Lipase_panc       
IPR033906   Lipase_N       
IPR002334   Allerg_PlipaseA1       
SUPFAM
SSF53474   SSF53474       
Gene 3D
PDB
1W52     E-value=1.59392e-38,     Score=399

Ontologies

Topology

Subcellular location
Secreted  
Length:
333
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.13747
Exp number, first 60 AAs:
0.00025
Total prob of N-in:
0.01513
outside
1  -  333
 
 

Population Genetic Test Statistics

Pi
228.682432
Theta
205.865723
Tajima's D
0.358303
CLR
0.485462
CSRT
0.47867606619669
Interpretation
Uncertain
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