SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02850
Pre Gene Modal
BGIBMGA003526
Annotation
PREDICTED:_uncharacterized_protein_LOC101737164_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.869 PlasmaMembrane   Reliability : 2.074
 

Sequence

CDS
ATGCGCCGCCCGCTGGCGCTGCTGCTAGTCGCCGCTGCGAGCGTCGCTGTTTCCGCGCAAATCGCTTGGACGCCAATCTTTCTTGACGGCAGCAGTCAAGTGGATCTCTGGACGCAGTCGTCAAGCGGATGCGCGTGCCCAGGCGAGGGCGGCGAAGAGTGCGCGTGTTGCGTGCGTGACGGCGCGTGTCCGTGCGGCGACATCGCGCCCGCCCGCTGCTCGCAGTGCGGACTCGAACAATACTGTGCTAATATGTGCAACATAACGATAGATTCTCGGATCCTGAAGGCCAAATCGGGGAAGAGCTTTGGACAAATTAAATCGCCATCCATGGAGGGACCAGGTTCCTGCTCTTACTTCCTACAGCCCGACGCTGGACAGCGGGTAGAGCTACAGCTGTATCGACTGGTTTCTGTTGGAAAATTTAATGGTACCAGTTGTGTAGGCGGATGGATCCAATTGAGTAGTGCAAGTGCAGTTCGGACTGATAGTGTGGCTGAAACTCGGCTATGTGGGGCGAACGAGCGTTACACTCCGCCTGTTGTACTCTTCGCAGACCATGGCGCAGCTCTGCTTGAGTTCAGAATAATAGAAAAAACTGTGAGGTCTCAATTCCTGGCATTCTTCAGCTTCACCTCGCTGAGCAATACTCAAGGGGTGGGTTTTCACCCCAGTGGAGGCTCCCGGATACCGCACACAGACTGCGACTGGTTATACCAGGATGTTTCGTGTCGTGGTCCGAACGCCTGTATCCTCGCGAGCCCCGGGTACCCAGGCTTGTATCCACCGCATCGCAAATGTCGTTATCTCTTCGCAACTAACTCCGTGCACACCAGGGTCAAAATCATCTTCACTTCCATATTACTACCCAGAAATCACTGTACATGGGATTATCTGACGTTAAGGGCTGGGAGCTCGCCGTCAGCACCGCTACTTGCCTCGCTTTGTTCAGAAAGAATGGCGACATTGGAACATCCCGGACCCAATTTACTATTAGAGTTCAAGTCTGGTCCTTTGGTGCCTCCTTACGATTATAACGGGTTCATAGCTAAATTAGAGTTTATTGAGCGACTGGACAGCAGTGGTGCGCCGCCTACTGTGTTACCAGCTTCCCCCCCACTAGCCGCCCTTACACATCTTTTAGATAATGGTGATGCAGCGTTAGACGCATTGGGTTCGAATGAAGTGTTCGCAAACAGCGGAGGTCGTATAGGTTGCGGCGCTATTGTCCGAGGGTACGGCCCGGGCGGCCTTCGCTCGGGTCATTTCGACACGCGAGCCACGACCTGGCGTACGCAGTGTACAGTACATCTCATCGGAGCTGCCACCGATGTTGTACAAGTCTCTTTGTTTAATTATAACTTAAGGTTACAAGGCTGTAGGTCTCATATAGAAATTTTAGAAGGTCTCCACGAATTTAGTTCGAGAGAAAGAGACAGGTCTGAGAAAGGAGATCGTGCTCTGCTCAAGGTGTGCGGGCCCGCCGCTCGAGAAGCCAGGGATCCGTCTGGAAGGTTCTTGATACGTCAAGCTGTGACTTCGAAAGGTGCTAATTTGACGATAATGGTGCGAAGAGCATTGTCACAGAACGCAGAGGAGGAGGAGTTTGTTGATGGTGCATTCGCGTTTCATGACGAACAACACGAAGGGACTGCCTCGCCGGACGCAACGTGCGCGTCCACGCATTACGGTCTCGCTGCACCGGCCCACGGAGGAGTCTCCGCACCCTCGCATCATCATATATTCTGGAATATAGAAGAGAGACTGCTGTGTACACATCGGTTTATACCGGCCTCAAATCAAAGTGTTACTGTGGAGATCCAGCGGTTAGACCGCATGTGGAGTGCAGAACCGACGGGGACCACTGGCGCGTCCGGATGCAGGACGGCCTGTGGCGACGCTGGGTGTGAATGCAGAGCACAAACTCCGTTACATTATCATGATCACGTGGCGCTAGTGGCTGGAGACGGAACCCACCTCTCCTGTCTGTGCGGCGATTTTCAGGCTGCTTGGTTGCCTGTCGTCGTCCGTAGTTGGACCAGCGTCCGCCTGGAGTACTCCGTGGCCCACTACACGTATGCGAGTAGGGGATTCGATTATGCTGCTGCATATAGTTTCAACGATGATGCCATGTGCGGGCAGAGAACATTTACAACACATTCAGGTGAGATTTCATCGAAGAACGTGTCCGTCACGGGAAGCTTAAACGAGTTTTTCTATCAGCAGTGCACTTGGGTGCTTGACTCGAACGTCGAGAGACAGCTTTTCATAGATATAACGTCGGAACAGGACAAGTCGTGTGGTTCATGGAATATCACCCTTCATGAGTGGTCTGGAGCAGGAGCGCACAGCGACGCAGGTCTCTCGGGAGCGGCGGGAGACCTCCTCTATACGTTCTGTGCAAGACACAAGAACCACACATATACGTTGCCTTGGAGACTGAATACCCTTGTTATAAGGTTGGTAGCACTGTCGCGGCAACAACCATTGTACACGATAAGGTGGCGTTCACAAGTCGTAAGAGCGAACAATCGCTTGGGACCCCCGACACCCGTTCCCGCAGCCTCGGCCGCGGGCAATGGGCTCACTATCTCGTACATCTTGTATTGCGTCTTATATTGCATACTACAGTACGCTTTATAA
Protein
MRRPLALLLVAAASVAVSAQIAWTPIFLDGSSQVDLWTQSSSGCACPGEGGEECACCVRDGACPCGDIAPARCSQCGLEQYCANMCNITIDSRILKAKSGKSFGQIKSPSMEGPGSCSYFLQPDAGQRVELQLYRLVSVGKFNGTSCVGGWIQLSSASAVRTDSVAETRLCGANERYTPPVVLFADHGAALLEFRIIEKTVRSQFLAFFSFTSLSNTQGVGFHPSGGSRIPHTDCDWLYQDVSCRGPNACILASPGYPGLYPPHRKCRYLFATNSVHTRVKIIFTSILLPRNHCTWDYLTLRAGSSPSAPLLASLCSERMATLEHPGPNLLLEFKSGPLVPPYDYNGFIAKLEFIERLDSSGAPPTVLPASPPLAALTHLLDNGDAALDALGSNEVFANSGGRIGCGAIVRGYGPGGLRSGHFDTRATTWRTQCTVHLIGAATDVVQVSLFNYNLRLQGCRSHIEILEGLHEFSSRERDRSEKGDRALLKVCGPAAREARDPSGRFLIRQAVTSKGANLTIMVRRALSQNAEEEEFVDGAFAFHDEQHEGTASPDATCASTHYGLAAPAHGGVSAPSHHHIFWNIEERLLCTHRFIPASNQSVTVEIQRLDRMWSAEPTGTTGASGCRTACGDAGCECRAQTPLHYHDHVALVAGDGTHLSCLCGDFQAAWLPVVVRSWTSVRLEYSVAHYTYASRGFDYAAAYSFNDDAMCGQRTFTTHSGEISSKNVSVTGSLNEFFYQQCTWVLDSNVERQLFIDITSEQDKSCGSWNITLHEWSGAGAHSDAGLSGAAGDLLYTFCARHKNHTYTLPWRLNTLVIRLVALSRQQPLYTIRWRSQVVRANNRLGPPTPVPAASAAGNGLTISYILYCVLYCILQYAL

Summary

Similarity
Belongs to the G-protein coupled receptor 1 family.
EMBL
ODYU01001404    SOQ37537.1    KZ150148    PZC72866.1    KQ459597    KPI94976.1    + More
KQ461150    KPJ08702.1    NEVH01020850    PNF21267.1    UFQT01000048    SSX18956.1    GEDC01015363    JAS21935.1    KQ971307    EFA11276.2    PNF21266.1    GFXV01000100    GFXV01007055    MBW11905.1    MBW18860.1    GGMS01000870    MBY70073.1    GEBQ01004437    JAT35540.1    ABLF02030121    ABLF02030124    ABLF02030127    ABLF02030128    GDHC01014052    JAQ04577.1    KQ434827    KZC07540.1    GBYB01014837    JAG84604.1    ADTU01023559    ADTU01023560    ADTU01023561    ADTU01023562    ADTU01023563    ADTU01023564    ADTU01023565    ADTU01023566    ADTU01023567    ADTU01023568    GGMS01013104    MBY82307.1    GECU01022018    JAS85688.1    DS235440    EEB15737.1    CVRI01000023    CRK92089.1    GDIP01108474    JAL95240.1    GDIQ01006414    JAN88323.1    GDIP01111821    JAL91893.1    GDIQ01235026    JAK16699.1    LRGB01000024    KZS21552.1    GDIQ01195637    JAK56088.1    GDIP01008367    JAM95348.1    GDIQ01162905    JAK88820.1    GDIQ01115275    JAL36451.1    GDIQ01049943    JAN44794.1    GDIP01096073    JAM07642.1    GDIP01108475    JAL95239.1    GDIQ01212382    JAK39343.1    GDIQ01214539    JAK37186.1    GDIQ01051395    JAN43342.1    GDIQ01066584    JAN28153.1    GDIQ01180511    JAK71214.1    GDIP01047932    JAM55783.1    GDIP01232656    JAI90745.1    MTYJ01000056    OQV17840.1    OQV17841.1    OQV17842.1   
Pfam
PF00431   CUB        + More
PF00001   7tm_1
Interpro
IPR035914   Sperma_CUB_dom_sf        + More
IPR000859   CUB_dom       
IPR000856   Opsin_RH3/RH4       
IPR017452   GPCR_Rhodpsn_7TM       
IPR000276   GPCR_Rhodpsn       
SUPFAM
SSF49854   SSF49854       
Gene 3D
PDB
6GJE     E-value=0.0116278,     Score=94

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.999537
 
 
Length:
880
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
37.1700499999999
Exp number, first 60 AAs:
20.12235
Total prob of N-in:
0.92199
POSSIBLE N-term signal
sequence
inside
1  -  4
TMhelix
5  -  27
outside
28  -  853
TMhelix
854  -  876
inside
877  -  880
 
 

Population Genetic Test Statistics

Pi
23.447669
Theta
180.113361
Tajima's D
0.726403
CLR
0.512574
CSRT
0.574921253937303
Interpretation
Uncertain
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