SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02847
Pre Gene Modal
BGIBMGA003523
Annotation
NA
Location in the cell
Extracellular   Reliability : 1.885
 

Sequence

CDS
ATGCAGACATCAACATTCGTTGTGCTAACATGCCTCATCGCTGTAGTTGTAGCAGACTTGTATATTGAACAATACCAGTCGCCAGTAGTGGACACCGTCCAGGAATCTGTATATGACACTCCCGTGAACGACAGAAGTCCTAGGACGAAGAGAGGGCTGCTTCTATTGAAGAAGAAGCTACTACTTGGTGCTCTTGGGCTGAAGGCGGCTAAAGTTGGTGCGGTGGGAGCCGGAGTGGTCGGCGCCATAGCTCTTAAGAGTAAAGCAGGCTGGCATTGA
Protein
MQTSTFVVLTCLIAVVVADLYIEQYQSPVVDTVQESVYDTPVNDRSPRTKRGLLLLKKKLLLGALGLKAAKVGAVGAGVVGAIALKSKAGWH

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.856446
 
 
Length:
92
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
38.08946
Exp number, first 60 AAs:
16.85338
Total prob of N-in:
0.83420
POSSIBLE N-term signal
sequence
inside
1  -  4
TMhelix
5  -  22
outside
23  -  62
TMhelix
63  -  85
inside
86  -  92
 
 

Population Genetic Test Statistics

Pi
294.898786
Theta
209.210202
Tajima's D
1.229526
CLR
0.599132
CSRT
0.72376381180941
Interpretation
Uncertain
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