SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02843  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003521
Annotation
PREDICTED:_death-inducer_obliterator_1_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.015
 

Sequence

CDS
ATGTCTAATACAGTAATCACCAACTACACTGACCTTAATGGACCGTCCACAAAGGCGGAAAGTTCTGTTGTTGTTATTGTAAACAAGGATGGCTCCTTGTCGGTCGACCAAAACCTACTTGGAACATTAATGGGTACAGATGGCACTCAGGGTGCAATAAGTGTAGTTCGAGTTGGGCATGAGGGTAAACCAGATGATGCTACGGATTCTGAAAATGAAGATGAGAAACTGCAACATGTCACACTTTCTGTGGATAGTTATTATGGTGAACCTAACAGTATCATCAAATATGACAGTGGTGCTGAAATGTTACAGTCGTTAAGGATTGAAACGAGGGAAAATAGTTTGATTGGGTTTCAAAATGATCACTGCTATACTTCATTGACTTCACCCAGTCAAGAAATAGGTACACATGAGAAGTCAAATAAGAGTGATACTTTAACCTCATACACAGATGGCGTAATAGAAATTACACAGTCATCACCAGTGCCCATCTCATCGCCTAAATCTGTTCCTAGTTCTAAAAAGATAACTATTTTGGAACAACAGATAATTCCAAAGGGTAAAAAAATATTAATTAAACCAACTGAATCGCCAATTATATTAAAAGGAAATGATGTGCTAACTAAAACTCTGCCAGTTATTCCTAAATCAAAACATGTAAAACCGTCTGAGAAAATAGAGACCATTCAAAAACATGACGAAAGTCCTGACACATCTTCAGTAAGTTCATCAGGTGAGAGTATCCCTGATAGAGACTCAGATTCTGATTATAAGGATACCAAAGACAAAAGTTGTACGTCTTTTAAAGTAAAAAAGGGAAAAGTAAAACCTCGAATTTTAAAATGCCCTGTTTCTAAGGCAAATAAAACAGAAATAAAAGGTACACCCAAATTAAAATATGGTAAAAATGCCCTTAAAAAGGAGATTAAAGATAAGGCAATTTCATTAAAAATTATGTCAGAACAGAAAGAGGACGAATTCAATATGGAGACTTTAATGCCAACAAGTAAAGTGAACGAAATACCTCCAATGAAAGATATAAGTAGAGTAGTAGTTAAACAAACACCAAAACCTTCTAAAAAAGAGAAGAAAACACCAGCTCATGTTACAGCTCTGTTAACAGATATGTCTTCATTATTTTCTACTCCTGATGTCATACGAAGGGTGTCTACAGACAACAAAGGACCACCTAAAGATTTGGTTGGCCCTGAGAATAAAAAAATCACAGGAATTGTTAAATTAGATGTGGACAATAAAGTGGCTGAAAATCCAAAGTCTGTTGAAGAGACAGATGAAAAATCAAAAACAATTCTTACTATTCATAAACCTCTGATTAAGCAAAAAGAGAAGGTTTTAAATTCTACAGATAAGACAACAAAAACATATGAATCTATCCCACAACTTGATGAAGTTAGTTTGGCACAAATATTGCAAGACAATACTGCCCCTAGTGTAGCAAAAAGTCAACAAGCAATTACCACTTCAACTACCATGAGCAGTCCAGGATTGGTTGGTCCTTTATCACCAACTTTAGATTTGCTTGGCAGTCTCAGTGCGATACAGCCTGAAGAAGAAGGTTTAACTGAAGATTTACTAATGCATGTTGCGCAACTTGTTGAGAGTTCAGAAAATTTACAAGAAGTTATTGACAAGCAAGTTTTGGGTAAAGTTGATTCCGTCCCTGCAAAACCTCCAGTGCATTCATTATTCCAACAGACACAAGCAGAGCCGAATCTGTATACACAAACACTTTCTAAAACAGTCCAAAAGAACATCACTGCACCACGTAAGGATCCAATAGAAATAGTACGACGTGATGGTCGGGTAATTACTTTACCTCCAATAGAAGCTCCTGCTACCAGATCATCTAAGCGCAAAAGTCAACTGGAAGTTACAAATGTTGAATCACCAACTGTTACAACTCCATTGATATCACCTACTCCTGAACCACAGGTACTACCTGTGCCCAAACAGTATGTAAATAAAAAACCTAACCCCAAAAAGATCGAACCTTTGCCTCAAGCAAATTTAATTGATAAAATTTGTGCAGAATCACAAGAAAGTTGGAATTCAGAAGATGACCCCAATAGATTATGGTGCATTTGCAAACAGCCTCACAATAACCGTTTCATGATTTGTTGTGATAGTTGTGAGGATTGGTTTCATGGGAAGTGTGTAAATATAACCAAAACTATGGGTCAGCAAATGGAGGAACAGGGTATAGAATGGAGGTGTCCAAACTGTATCAAAAAAGTTAAAACTACACCAAAAAGTACATCTAAGCCATCACTGACTCCGAAGAAACATGAAGTGGAATCGTTATCACCTGAGACGCCTCCGCCCGAGAGAAAAAAGGAAAATGCTGGAAAAACAACCTGTATAGTTTGCAAGAAACATGCGCGCGCCAGCAGTATCTACTGTAGTGATGCATGTATTCTCAAACACGCACAGGACTCTCTTGTTAACCCGACCAATCAGAGCAAAACTGAAGAAGAAACTGGTAAATCACAAGAGAAACAGAATCCTGAATCAAGGGTTATTGTATATGAAAGGAAATCGGGACGCTTATTGGCTGGGCCAAATGCTCCGACTGCCGAAAATTTAAAAGCTTGGATACAAAAGAATCCTACATTTGAAGTTGTCAGACCTGGTGCTCTTAATACTATTAGACCAAATATAAGCAAAAAAAAGACTTCGATAGAATCAAATAAAATACAAACCACACTGAACTTCGAAAGGTTACCAAGAAAAAGTATAGAGCCAACAGTTCCAACTAAATCACAGACAAGTGAGGTGAAGGACAGACTGAAGCCTTTACTATCACCAAAAGAAGAACCGAAACAGGTTCCTCAACCTAAAACGCCAGTGACACCAAAAAGTCTTCAAAGTCAAAACTTTGACTCTCCTAAAGCTAGCGGGTCAGGCATACGAAACTCCAGTGATAAAAGGAAGAGCTCTAGAAACTCTTTAAATAAATCTCAATCCATTCCCGAAAAGGCCGCTTCAGTTACTCCGTCGACGTCTCGTAAAAAAGAGTCGCATGAAAACAAAAGCAAAATGAATTCACTGGAATCAATACGTGAAAACGTTAGAAAATCATTGCAAGAACAGATGAGCCTACGCATGGCAGAAAACAAAGAATCTAACTTTACAGAAGATGAAATAGAACAATTTGCGCTCGAAACGGAAGAAGAATTGCACGATCTATTCCGAGACGTTGGTATGAAATATAAAGCTAAATACAGATCGCTCATGTTTAATATTAAAGACCGCAAGAACCTGACTCTGTGGGAAAAGATTTGCGATAAATCATTAACACCAAAGCAGTTGGTACGACTGTCTCCAGAAGAACTTGCAAGTCAAGAATTAGCTGAATGGAGAGATCAAGAAGCGAAACATCAATTGGAGTTGATTAAGAAATCGGAGTTAGATCTTTTGGCCGCCAATAAAACTTACGTTCTCAAAACACACAAAGGCGAAGAGGTAATGGAAACTAAGGAATCTGTATCAACAGAACTAGACCCTAATGTGCCAGTTGAAGATGTGGTCAGTGTACTAAATGATGCTATCAATGAAGATTCACAAGAAAAAGAGAAAACACCAGATATGTTACGTAAGGGTTCAAATAAAAAATCTAATAGCCGTAAAAGAGAGCGCGAAGAAAGCTATTATCAGACTAAAAAGGTTAGACGAGATTCTGAAAAGAAATCTAGATCTTCTAGGCGAAGAAAGTCTGCATGCTATGAAAAAGAACCTAAATTAAGCCAGAGGAGGCCTTCGCGAAGATCGGACAGAAAATCGAGATCCATTTCAAACGATAGATCAAGATCAGGTAAGGAGAAATCTGATATAAGAGAAAGATCTCTATATCGATCAAAGTCTAAAGAGAAATCAAGACGGCGATCAAAATCCAAGTCACGCGTACGGTCCAGATCTAAATCTATAGAAAAGTCACGCGAGCGCGATCGATCTGGGCGTCGGTCGCGATCTAGAAGTATTTCGAAAAGACATAGCTCACGATCGAAGCGACTACCTAGTACTGAAGACAAACAACAGCCTCGTTCCCGGTCTCAAGACAACGTTATGATGAAGAATAAGCATGATTCCACAGACTCAGAATCTTTGGAAAGGCCAAAATCAGCCATGCTCAAAGAGGTTCATCCTGAGTATGATCCTCATGAGCCTATGATAACATCGGCGTTCTCTGACGAAGATCTGATAAAATCCAGAGAAGACGTATTTGAAGAAAGTTACAAAAACAAAACTGATAATGGGGTGGGATATGATTCCAGTGAACCCATATCAACTAATGTTGAATTAATTAAGTCTAATACATATCAAAGTCTGGAAAAGACGTCAGAAGGTGACAGTGATCAAGAACCAAGCAGTACTGTTGATACTATACCCGTCGCAACAGTTTGGAATGGATGTATAAACATGGTAGATGTTGCAAGATTCTATGTTTCAGCACATGAGGTCTCTGGCACTGCAGTCGACCTGGAAGAAGATCTGCCCACAGAACTTGATATTGTAGGAAGAATTAATCCAGATACAGTCTGGGAATATATTGGAAAGATGAAGAAAGCTAGTAATAAAGATATAATTATTTTAAGACTTCAAGCTGCTAATGATGAGGAAAAAATGCCATACATCGCATTGTTTAGTTACTTAAGTAGTCGAAATAGGTTAGGCGTGGTAAAAGTATCAAATACGACAACAGTGAAAGATTTCTACGTGGTTCCGCTGCCGGCGAATACCACACTTCCACCAGTGTTGATGCCTCTGGACGGCCCCGGAATCGGCGAGGTTAAAACTCATCAGCTACTCACCATCGTTATAAGGCAAAGAAAGAAACGTCTAGCATCTCACATTCCTAAAGAAGTAATTCCAGCTAAGGTTGCGAGGGAGTCTCACAAACGTTCATATACGCCACCAGTGCAGAGCAAGATTACTCACACGCCACCGGCTTCGCCTCGGCGTCGTAATCCACTTCCACTACCATCATACAGCACATCTACGCTCTCTACTTCGGTTAAAGATAAAATTGCTGCATCTTTAGGAGCAGTTGACGACGATGATGAAGCATACAGCCCAGGTTCGTCAAGTAGCGGAAGCAGTGCTACTGCAACGGCATCTTCGAGTATCGCTTCTAGTACTTTACGTTCGAAAATGGAAGAACTCAATCGACAGATAGAAGAACAGAAACAACAAATTCGTAAAATAGCACAAGCCAGCTCTTCTCCAGGAGAGGATGAAGCTTATTCGCCGTCTCGACCAATGACTCCACCTGCCGCATCTGTCGTTCCACTAGCAGACATAGCATTGCCTTCAAACCTGCATGAAATACTTGCAACAATAAAACAACGTTCAGAAACTACAACTGGAGATGTAGATATGCGTACATTACCCCTGAAGTAG
Protein
MSNTVITNYTDLNGPSTKAESSVVVIVNKDGSLSVDQNLLGTLMGTDGTQGAISVVRVGHEGKPDDATDSENEDEKLQHVTLSVDSYYGEPNSIIKYDSGAEMLQSLRIETRENSLIGFQNDHCYTSLTSPSQEIGTHEKSNKSDTLTSYTDGVIEITQSSPVPISSPKSVPSSKKITILEQQIIPKGKKILIKPTESPIILKGNDVLTKTLPVIPKSKHVKPSEKIETIQKHDESPDTSSVSSSGESIPDRDSDSDYKDTKDKSCTSFKVKKGKVKPRILKCPVSKANKTEIKGTPKLKYGKNALKKEIKDKAISLKIMSEQKEDEFNMETLMPTSKVNEIPPMKDISRVVVKQTPKPSKKEKKTPAHVTALLTDMSSLFSTPDVIRRVSTDNKGPPKDLVGPENKKITGIVKLDVDNKVAENPKSVEETDEKSKTILTIHKPLIKQKEKVLNSTDKTTKTYESIPQLDEVSLAQILQDNTAPSVAKSQQAITTSTTMSSPGLVGPLSPTLDLLGSLSAIQPEEEGLTEDLLMHVAQLVESSENLQEVIDKQVLGKVDSVPAKPPVHSLFQQTQAEPNLYTQTLSKTVQKNITAPRKDPIEIVRRDGRVITLPPIEAPATRSSKRKSQLEVTNVESPTVTTPLISPTPEPQVLPVPKQYVNKKPNPKKIEPLPQANLIDKICAESQESWNSEDDPNRLWCICKQPHNNRFMICCDSCEDWFHGKCVNITKTMGQQMEEQGIEWRCPNCIKKVKTTPKSTSKPSLTPKKHEVESLSPETPPPERKKENAGKTTCIVCKKHARASSIYCSDACILKHAQDSLVNPTNQSKTEEETGKSQEKQNPESRVIVYERKSGRLLAGPNAPTAENLKAWIQKNPTFEVVRPGALNTIRPNISKKKTSIESNKIQTTLNFERLPRKSIEPTVPTKSQTSEVKDRLKPLLSPKEEPKQVPQPKTPVTPKSLQSQNFDSPKASGSGIRNSSDKRKSSRNSLNKSQSIPEKAASVTPSTSRKKESHENKSKMNSLESIRENVRKSLQEQMSLRMAENKESNFTEDEIEQFALETEEELHDLFRDVGMKYKAKYRSLMFNIKDRKNLTLWEKICDKSLTPKQLVRLSPEELASQELAEWRDQEAKHQLELIKKSELDLLAANKTYVLKTHKGEEVMETKESVSTELDPNVPVEDVVSVLNDAINEDSQEKEKTPDMLRKGSNKKSNSRKREREESYYQTKKVRRDSEKKSRSSRRRKSACYEKEPKLSQRRPSRRSDRKSRSISNDRSRSGKEKSDIRERSLYRSKSKEKSRRRSKSKSRVRSRSKSIEKSRERDRSGRRSRSRSISKRHSSRSKRLPSTEDKQQPRSRSQDNVMMKNKHDSTDSESLERPKSAMLKEVHPEYDPHEPMITSAFSDEDLIKSREDVFEESYKNKTDNGVGYDSSEPISTNVELIKSNTYQSLEKTSEGDSDQEPSSTVDTIPVATVWNGCINMVDVARFYVSAHEVSGTAVDLEEDLPTELDIVGRINPDTVWEYIGKMKKASNKDIIILRLQAANDEEKMPYIALFSYLSSRNRLGVVKVSNTTTVKDFYVVPLPANTTLPPVLMPLDGPGIGEVKTHQLLTIVIRQRKKRLASHIPKEVIPAKVARESHKRSYTPPVQSKITHTPPASPRRRNPLPLPSYSTSTLSTSVKDKIAASLGAVDDDDEAYSPGSSSSGSSATATASSSIASSTLRSKMEELNRQIEEQKQQIRKIAQASSSPGEDEAYSPSRPMTPPAASVVPLADIALPSNLHEILATIKQRSETTTGDVDMRTLPLK

Summary

Uniprot
Pfam
PF07500   TFIIS_M        + More
PF07744   SPOC
PF07533   BRK
PF00628   PHD
Interpro
IPR011011   Znf_FYVE_PHD        + More
IPR012921   SPOC_C       
IPR037259   BRK_sf       
IPR019787   Znf_PHD-finger       
IPR013083   Znf_RING/FYVE/PHD       
IPR001965   Znf_PHD       
IPR006576   BRK_domain       
IPR019786   Zinc_finger_PHD-type_CS       
IPR003618   TFIIS_cen_dom       
IPR036575   TFIIS_cen_dom_sf       
SUPFAM
SSF160481   SSF160481        + More
SSF57903   SSF57903       
SSF46942   SSF46942       
Gene 3D
ProteinModelPortal
PDB
5WLE     E-value=4.08057e-27,     Score=308

Ontologies

Topology

Length:
1806
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00389
Exp number, first 60 AAs:
0.00097
Total prob of N-in:
0.00005
outside
1  -  1806
 
 

Population Genetic Test Statistics

Pi
299.348783
Theta
232.034171
Tajima's D
-1.851082
CLR
12.169222
CSRT
0.0252987350632468
Interpretation
Uncertain
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