Gene

KWMTBOMO02842  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003669

Annotation

PREDICTED:_putative_nuclease_HARBI1_[Plutella_xylostella]

Location

Bomo_Chr5(-):12383857-12385005      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.151 PlasmaMembrane   Reliability : 1.547

CDS

ATGACTTCTGAGAGCAGTTTTGAAGAATTTATTAACTATATTTTTGATAGCAGAGTGTATAATTATCCGTCGCGAAGGTATTTGAGAGATGCAGATAACCCGTTGGAAGTTTACGATGACGACGAATTCCGAAAACGTTACCGGCTTACCAAAGATTCGGTTGTGCATATTTTGCTGCCTTTGTTGACTAACAACATTAATGAAAACGATCGTGGACTACCTTTAACGCCGATATTACAAGTGCTAATTGCTTTGAGATTTTACGCAAATTTTCAGATTGTTTGTGGCGACTTGCACAAAATTTCTCAATCCGTAGTATCAAAAACGGTAGCAAACATTTCTAAGAGATTGGCTTTGAAATCCAGGCAATTTATTAAATTCCCTGCATTAAATGAAAGGGTTGAAACTAAAAGAAAATTCTACCGAATTGCAGGGTTTCCAGGTGTAATTGGATGTATTGATTGCACACACATTCCAATAAAAAATCCATCCAGAGCAAGGGGAGAAATCTTTCGTAATAGAAAAGGCTGGTTTTCTATCAATGTCCAAATAATATGTGGACCGCAAATGGAAATATACGACATTGTTGTGCGATGGCCTGGATCTGTGCATGATTCGCGCATATTTAACAACAGCAGATTGAGATTTGAAGAAGGCGATTTAGATGGCATTCTTGTCGGAGACAGTGGTTATGCGCAGACTGGCTTTATGTACACTCCTGTACTCAATCCTCAAACAGACCCAGAACACAGATACAATCGAGCATGTGTAAATGGTGTATTAAAGAGACGCTTTGCTTGTTTGTGTAGAAAATTACAATACAGTACACCAAATACATGTAATATTATAGTCTCTTGTGCTGCCCTACACAACATTTGTTTAATGACCAATGAACCTGAGCTGAACCCTGAAATTGAGCTAGAAAATGTCCCAGTACCTAATACTCAGGACTCTTCTAGAGGGAGTATTATAAGATCGGCTTTTATTTCTAGGCATTTCAGTTAA

Protein

MTSESSFEEFINYIFDSRVYNYPSRRYLRDADNPLEVYDDDEFRKRYRLTKDSVVHILLPLLTNNINENDRGLPLTPILQVLIALRFYANFQIVCGDLHKISQSVVSKTVANISKRLALKSRQFIKFPALNERVETKRKFYRIAGFPGVIGCIDCTHIPIKNPSRARGEIFRNRKGWFSINVQIICGPQMEIYDIVVRWPGSVHDSRIFNNSRLRFEEGDLDGILVGDSGYAQTGFMYTPVLNPQTDPEHRYNRACVNGVLKRRFACLCRKLQYSTPNTCNIIVSCAALHNICLMTNEPELNPEIELENVPVPNTQDSSRGSIIRSAFISRHFS

Uniprot

A0A1E1WP29   A0A1E1VZ84   A0A1E1W4G1   J9KAY9   J9M1Z2   A0A0A9X6M5   + More
J9LQJ0   A0A2S2Q8E2   J9KAE0   A0A2R5LJM8   A0A3L8DKW7   A0A151IDU1   J9L7U3   A0A2R2MN13   A0A1S3D2Y8   A0A1S3JPJ3   A0A1S3DMI2   J9M7I7   A0A2A4IV58   A0A1S3IAF8   A0A3B1K7F4   J3JVI4   A0A3Q0JDK0   N6TPJ7   A0A1I8NJZ2   A0A3B1KGA0   A0A1E1W476   A0A0L7LT10   J9LU71   A0A0J7KNS8   A0A1Y1MC35   A0A1E1WB15   A0A1E1WUG9   J9LL64   A0A2H1WJH3   J9JM90   J9JTM0   A0A1Y1KFZ4   A0A151WWY0   A0A2P8Z014   A0A293LX60   J9JZ87   X1WM76   J9K8M3   A0A3B1IDV5   J9KPC8   A0A2S2NKK2   A0A1Y1KLA7   D7EKQ7   W4Z5N5   A0A0J7KDD9   A0A2P8Y1X7   D6WYB2   J9LUU4   J9M943   J9JMK1   X1X0S1   A0A2S2N9L1   A0A0P4WFI8   J9KK24   J9KWE0   H9JKZ1   J9M2S7   A0A2S2NS44   W4YDG5   G3Q0A3   A0A147BBZ9   C4WUD0   W4YE18   G3NNV5   J9LYS1   A0A1Y1MZ45   A0A194QSI6   A0A131XTB4   A0A090X8B9   G3Q5V2   G3PAM2   G3PWP6   A0A0J7MTD8   A0A1Y1M7D0   A0A3Q0J0W5   A0A194Q9N0   G3NPN9   A0A2P8YDT7   X1XBV4   J9L1W5   J9JXP4   A0A1Y1MBC4   A0A2R5LKM7   X1WZQ8   A0A0A9YXL9   J9LXS6   W4Z6F3   J9KF22   A0A0N7ZAW4   X1XKK1   A0A1S3IHJ1  

Pubmed

25401762    30249741    25329095    22516182    23537049    25315136    + More
26227816    28004739    29403074    18362917    19820115    19121390    29652888    26354079    25970599    26823975   

EMBL

GDQN01002346    JAT88708.1    GDQN01011014    GDQN01002039    JAT80040.1    JAT89015.1    + More
GDQN01011578    GDQN01009283    JAT79476.1    JAT81771.1    ABLF02015906    ABLF02028680    GBHO01028298    JAG15306.1    ABLF02010163    GGMS01004279    MBY73482.1    ABLF02014659    GGLE01005627    MBY09753.1    QOIP01000007    RLU20812.1    KQ977960    KYM98429.1    ABLF02016112    ABLF02042800    ABLF02020359    ABLF02020361    ABLF02020362    ABLF02020369    NWSH01007141    PCG63072.1    BT127252    KB632323    AEE62214.1    ERL92360.1    APGK01059522    KB741294    ENN70196.1    GDQN01009290    JAT81764.1    JTDY01000151    KOB78582.1    ABLF02037524    LBMM01005020    KMQ91894.1    GEZM01035464    GEZM01035462    JAV83213.1    GDQN01006925    JAT84129.1    GDQN01000432    JAT90622.1    ABLF02019988    ABLF02066411    ODYU01009057    SOQ53199.1    ABLF02016431    ABLF02029655    ABLF02030019    GEZM01088054    JAV58326.1    KQ982672    KYQ52449.1    PYGN01000260    PSN49845.1    GFWV01008543    MAA33272.1    ABLF02036739    ABLF02010962    ABLF02010963    ABLF02010964    ABLF02010965    ABLF02010967    ABLF02011162    ABLF02062850    ABLF02006612    ABLF02034348    GGMR01005102    MBY17721.1    GEZM01080383    JAV62179.1    DS497765    EFA11633.1    AAGJ04026085    LBMM01009123    KMQ88377.1    PYGN01001035    PSN38265.1    KQ971356    EFA09128.1    ABLF02007356    ABLF02017542    ABLF02015759    ABLF02020738    GGMR01001282    MBY13901.1    GDRN01093065    GDRN01093064    GDRN01093063    GDRN01093062    JAI59972.1    ABLF02038239    ABLF02016012    ABLF02055237    BABH01011318    ABLF02011053    GGMR01007355    MBY19974.1    AAGJ04105957    GEGO01007104    JAR88300.1    ABLF02006541    ABLF02042859    AK341014    BAH71500.1    AAGJ04064468    ABLF02012895    GEZM01017851    GEZM01017841    GEZM01017840    JAV90428.1    KQ461175    KPJ07945.1    GEFM01006224    JAP69572.1    GBIH01002049    JAC92661.1    LBMM01018514    KMQ83765.1    GEZM01038551    JAV81614.1    KQ459472    KPJ00116.1    PYGN01000674    PSN42418.1    ABLF02033330    ABLF02033336    ABLF02019815    ABLF02019816    ABLF02008545    GEZM01038550    JAV81615.1    GGLE01005741    MBY09867.1    ABLF02008641    ABLF02011808    GBHO01005857    GDHC01007230    JAG37747.1    JAQ11399.1    ABLF02003846    AAGJ04046512    AAGJ04046513    AAGJ04046514    ABLF02061340    GDRN01093061    JAI59976.1    ABLF02020736   

Proteomes

UP000007819    UP000279307    UP000078542    UP000085678    UP000079169    UP000218220    + More
UP000018467    UP000030742    UP000019118    UP000095301    UP000037510    UP000036403    UP000075809    UP000245037    UP000007266    UP000007110    UP000005204    UP000007635    UP000053240    UP000053268   

PRIDE

H9JKZ1   

Pfam

PF13359   DDE_Tnp_4        + More
PF04500   FLYWCH
PF16087   DUF4817
PF05699   Dimer_Tnp_hAT
PF00400   WD40
PF12259   Baculo_F
PF13843   DDE_Tnp_1_7

Interpro

IPR027806   HARBI1_dom        + More
IPR026103   HARBI1_animal       
IPR007588   Znf_FLYWCH       
IPR032135   DUF4817       
IPR012337   RNaseH-like_sf       
IPR008906   HATC_C_dom       
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR036322   WD40_repeat_dom_sf       
IPR022048   Envelope_fusion-like       
IPR029526   PGBD       

SUPFAM

SSF53098   SSF53098        + More
SSF50978   SSF50978       

Gene 3D

2.130.10.10    

ProteinModelPortal

A0A1E1WP29   A0A1E1VZ84   A0A1E1W4G1   J9KAY9   J9M1Z2   A0A0A9X6M5   + More
J9LQJ0   A0A2S2Q8E2   J9KAE0   A0A2R5LJM8   A0A3L8DKW7   A0A151IDU1   J9L7U3   A0A2R2MN13   A0A1S3D2Y8   A0A1S3JPJ3   A0A1S3DMI2   J9M7I7   A0A2A4IV58   A0A1S3IAF8   A0A3B1K7F4   J3JVI4   A0A3Q0JDK0   N6TPJ7   A0A1I8NJZ2   A0A3B1KGA0   A0A1E1W476   A0A0L7LT10   J9LU71   A0A0J7KNS8   A0A1Y1MC35   A0A1E1WB15   A0A1E1WUG9   J9LL64   A0A2H1WJH3   J9JM90   J9JTM0   A0A1Y1KFZ4   A0A151WWY0   A0A2P8Z014   A0A293LX60   J9JZ87   X1WM76   J9K8M3   A0A3B1IDV5   J9KPC8   A0A2S2NKK2   A0A1Y1KLA7   D7EKQ7   W4Z5N5   A0A0J7KDD9   A0A2P8Y1X7   D6WYB2   J9LUU4   J9M943   J9JMK1   X1X0S1   A0A2S2N9L1   A0A0P4WFI8   J9KK24   J9KWE0   H9JKZ1   J9M2S7   A0A2S2NS44   W4YDG5   G3Q0A3   A0A147BBZ9   C4WUD0   W4YE18   G3NNV5   J9LYS1   A0A1Y1MZ45   A0A194QSI6   A0A131XTB4   A0A090X8B9   G3Q5V2   G3PAM2   G3PWP6   A0A0J7MTD8   A0A1Y1M7D0   A0A3Q0J0W5   A0A194Q9N0   G3NPN9   A0A2P8YDT7   X1XBV4   J9L1W5   J9JXP4   A0A1Y1MBC4   A0A2R5LKM7   X1WZQ8   A0A0A9YXL9   J9LXS6   W4Z6F3   J9KF22   A0A0N7ZAW4   X1XKK1   A0A1S3IHJ1  

KEGG

101741468    K23222 nuclease HARBI1 [EC:3.1.-.-] | (RefSeq) putative nuclease HARBI1

GO

GO:0046983   GO:0016021  

Length:

334

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0836600000000001

Exp number, first 60 AAs:

0.00016

Total prob of N-in:

0.00730

outside

1  -  334

 

 

Pi

187.387435

Theta

156.884946

Tajima's D

0.569

CLR

20.996198

CSRT

0.537473126343683

Interpretation

Uncertain