Silkworm Genome Informatics Database

Gene

KWMTBOMO02841

Pre Gene Modal

BGIBMGA001718

Annotation

PREDICTED:_myb/SANT-like_DNA-binding_domain-containing_protein_3?_partial_[Plutella_xylostella]

Location

Bomo_Chr5(+):12382086-12383338 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.638

CDS

ATGACAGCTAGTCAAAACACAAAAAAACTTTTGTGGATACATTTAACAGAAGAATTCAATTCAATTGAATCAAATGCAAAGCGAAGTGAGGCCCAGCTCAAGAAGTGCTGGGATAATTTAAAAACACGGAGGAAGCACTTTTTAGCTAATGAAAAGCGTCAGAGAATGAAGACTGGTGGCGGACAGTGTGTTCCAAATGAGCCACAGCCTGGTAGCAGCAATGAGACCCTTATTTTTGCTGAGGTTCTACTGGATCAGACTGATGTGGAACTCAGGGGTGACATTGACAGTGATACCATTTACAGTTCTGAAGATATTGCAATGGAGCTTGAAACATCAGTTCCAGCAGCAGCGCAACCACAACAGAATGATGAAGTTCTGAGTGTCTATCTATATTAA

Protein

MTASQNTKKLLWIHLTEEFNSIESNAKRSEAQLKKCWDNLKTRRKHFLANEKRQRMKTGGGQCVPNEPQPGSSNETLIFAEVLLDQTDVELRGDIDSDTIYSSEDIAMELETSVPAAAQPQQNDEVLSVYLY

Uniprot

A0A2P8YPJ3 A0A2P8Y978 X1WLS1 A0A0K8SUU1 A0A2P8Z4N5 A0A0A9XQ61 + More
A0A0A9WAW2 J9L8P9 A0A0A1WFL6 A0A2S2NXS2 J9LQJ1 A0A3Q0K4F1 A0A131YQA5 A0A151JPG2 A0A0L7LEI2 A0A3Q0JDT2

Pubmed

29403074 26823975 25401762 25830018 26830274 26227816 + More

EMBL

PYGN01000448 PSN46171.1 PYGN01000787 PSN40815.1 ABLF02019198 ABLF02057309 + More
GBRD01009171 GDHC01003599 JAG56650.1 JAQ15030.1 PYGN01000197 PSN51456.1 GBHO01022631 JAG20973.1 GBHO01039991 JAG03613.1 ABLF02033330 GBXI01016806 JAC97485.1 GGMR01009410 MBY22029.1 ABLF02010163 GEDV01007430 JAP81127.1 KQ978754 KYN28620.1 JTDY01001465 KOB73800.1

Proteomes

UP000245037 UP000007819 UP000078492 UP000037510 UP000079169

Pfam

PF13873 Myb_DNA-bind_5 + More
PF02944 BESS

Interpro

IPR028002   Myb_DNA-bind_5        + More
IPR001005   SANT/Myb
IPR026709   Msantd3
IPR004210   BESS_motif
IPR026753   NAIF1

CDD

cd00167 SANT

ProteinModelPortal

A0A2P8YPJ3 A0A2P8Y978 X1WLS1 A0A0K8SUU1 A0A2P8Z4N5 A0A0A9XQ61 + More
A0A0A9WAW2 J9L8P9 A0A0A1WFL6 A0A2S2NXS2 J9LQJ1 A0A3Q0K4F1 A0A131YQA5 A0A151JPG2 A0A0L7LEI2 A0A3Q0JDT2

KEGG

105841298 no KO assigned | (RefSeq) regulator of G-protein signaling 3-like

GO

GO:0005634 GO:0003677 GO:0006915

PANTHER

PTHR21632 PTHR23098

Subcellular location

Nucleus

Length:

132

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.50798

inside

1 - 132

Pi

241.808553

Theta

205.005899

Tajima's D

0.729972

CLR

0.373628

CSRT

0.579271036448178

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics