Gene

KWMTBOMO02838  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003670

Annotation

argonaute_1_[Bombyx_mori]

Location

Bomo_Chr5(-):12352747-12362625      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.543

CDS

ATGTACCCCGTTGGTCAACCTCCAGCGGGGGAGACGAGTGGTGGGGCAGTAGGTGTTGCAGGAGCCGTGGGTGCACCTGCTGGCACGCCTGGAGCAGCGCCCGTAGCTCCGAGCGCTGCACCAGTTGGAGCACCGGCCCCAGGCGTGGCAGGTGGTGCAGCAGGTCTGCCACTAGTATCTCCAGCAGCAGCGGCGCCTCCAGATCTGCCAGTGCTAACATGTCCTCGACGACCAAACCTTGGCCACGAGGGCAGGCCAATAATGCTGAGAGCAAACCATTTTCAAATATCAATGCCAAGAGGGTTTGTTCATCACTATGATGTGAATATTCAACCTGATAAATGCCCTAGGAAGGTGAATAGAGAAATAGTTGAGACAATGGTGCACTGTTATAATAAAATATTTGGAGCCCTCAAACCAGTGTTTGATGGAAGAAATAATTTGTACACAAGAGACCCTCTTCCCATAGGAAATGATAGAATGGAATTAGAAGTAATTTTACCTGGTGAAGGAAAAGACAGAGTGTTCCGTGTTACTATTAAATGGGTAGCTCAGGTTTCATTGTTTGCACTGGAAGAGGCATTGGAAGGTCGCACAAGACAAATCCCTTATGATGCAATCTTAGCTCTGGATGTAGTGATGAGACATTTACCATCAATGATGTATACCCCTGTTGGACGCTCATTTTTCTCTTCACCAGAGGGATATTATCATCCCCTTGGTGGTGGACGAGAAGTTTGGTTTGGTTTTCATCAATCGGTGAGACCAAGCCAATGGAAAATGATGCTTAATATTGATGTGTCAGCAACTGCTTTTTATAAAGCTCAGCCCGTTATAGAGTTCATGTGTGAAGTTCTTGATATACGAGATATTAATGACCAAAGAAAACCATTAACAGACTCACAGAGAGTTAAGTTTACTAAAGAAATTAAAGGTTTGAAAATAGAAATCACGCATTGTGGTACTATGAAGCGTAAATACAGAGTGTGCAATGTGACACGTAGGCCTGCTCAAATGCAGTCTTTTCCTCTTCAACTAGAAAATGGACAAACAGTAGAATGCACAGTAGCTAAATATTTTTTGGACAAATATAAGATGAAGCTTAGATACCCTCATCTGCCATGTTTACAAGTAGGCCAGGAACACAAACACACATACCTACCTCTTGAAGTTTGTAATATTGTTCCGGGACAGAGATGTATAAAAAAATTAACAGATATGCAAACATCAACCATGATCAAAGCAACAGCACGTTCCGCTCCAGACAGGGAGAGGGAAATCAATAATTTGGTCCGTCGAGCAAACTTCAATACTGATTCGTATGTAAAAGAATTTGGGCTAACCATATCCAATAACATGATGGAGGTTCGCGGCCGAGTGCTACCTCCGCCGAAGCTGCAATATGGTGGTCGTGTGTCCTCACTGGGTGGACAGCAAGCATTACCGAATCAGGGAGTTTGGGACATGCGAGGAAAACAGTTTTTTATGGGAGTCGAGATAAGAGTATGGGCGATAGCATGTTTCGCGCCACAAAGAACAGTACGAGAGGATGCTCTCAAGAATTTTACTCAACAACTTCAAAAGATATCCAACGACGCTGGCATGCCAATAATAGGGCAACCCTGTTTCTGCAAGTACGCTACAGGGCCAGACCAAGTGGAGCCTATGTTTAAATACTTAAAGTCTACATTTGTGCAGCTACAGCTCGTTGTCGTCGTGTTACCAGGAAAAACACCTGTCTATGCCGAAGTAAAAAGAGTTGGTGACACAGTATTGGGAATGGCAACTCAATGTGTACAAGCGAAGAACGTAAACAAAACTTCACCGCAGACCCTCAGTAATTTATGTTTAAAAATTAATGTTAAACTGGGAGGCATTAATTCTATTCTCGTTCCATCTCTTCGTCCGAAGGTGTTCAACGAGCCCGTGATCTTCCTGGGCGTGGACGTGACGCACCCGCCCGCCGGTGACAACAAGAAGCCTTCCATCGCGGCCGTCGTCGGCTCCATGGACGCGCATCCGTCGCGGTACGCCGCCACCGTCAGGGTACAGCAGCACCGGCAAGAGATAGTTCACGAAATGAGCAGCATGGTCCAGGAGCTGCTCATCATGTTTTACAAGAGCACCGGCGGATTCAAACCCCACCGGATCATCATGTATCGCGACGGCATCTCCGAAGGCCAGTTCCTGCACGTCTTACAGCATGAGCTGACTGCTGTGAGGGAGGCTTGTATCAAGCTGGAAGCGGAGTACAAGCCGGGCATCACTTTCATCGTGGTACAGAAGCGACATCACACGCGGCTGTTCTGCGCCGACAAGAAGGAGCAGTCCGGCAAGTCCGGGAACATCCCGGCCGGGACCACGGTCGACCTCGGCATCACGCATCCCACCGAATTCGATTTCTACCTGTGCAGTCACCAGGGCATCCAGGGTACGTCGCGGCCGTCGCACTACCACGTGCTGTGGGACGACAACCACTTCGGTTCGGACGAGCTGCAGTGCCTCACGTACCAGCTGTGCCACACGTACGTGCGCTGCACGCGCTCCGTGTCCATCCCGGCGCCGGCCTACTACGCGCACCTGGTCGCCTTCCGCGCGCGCTACCACCTCGTCGAGAAGGAGCACGACTCGGGCGAGGGCAGCCACCAGTCCGCCTGCAGCGAGGACCGCACGCCCGGCGCCATGGCGCGCGCCATCACCGTGCACGCCGTCACCAAGAAGGTCATGTACTTCGCCTAA

Protein

MYPVGQPPAGETSGGAVGVAGAVGAPAGTPGAAPVAPSAAPVGAPAPGVAGGAAGLPLVSPAAAAPPDLPVLTCPRRPNLGHEGRPIMLRANHFQISMPRGFVHHYDVNIQPDKCPRKVNREIVETMVHCYNKIFGALKPVFDGRNNLYTRDPLPIGNDRMELEVILPGEGKDRVFRVTIKWVAQVSLFALEEALEGRTRQIPYDAILALDVVMRHLPSMMYTPVGRSFFSSPEGYYHPLGGGREVWFGFHQSVRPSQWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRDINDQRKPLTDSQRVKFTKEIKGLKIEITHCGTMKRKYRVCNVTRRPAQMQSFPLQLENGQTVECTVAKYFLDKYKMKLRYPHLPCLQVGQEHKHTYLPLEVCNIVPGQRCIKKLTDMQTSTMIKATARSAPDREREINNLVRRANFNTDSYVKEFGLTISNNMMEVRGRVLPPPKLQYGGRVSSLGGQQALPNQGVWDMRGKQFFMGVEIRVWAIACFAPQRTVREDALKNFTQQLQKISNDAGMPIIGQPCFCKYATGPDQVEPMFKYLKSTFVQLQLVVVVLPGKTPVYAEVKRVGDTVLGMATQCVQAKNVNKTSPQTLSNLCLKINVKLGGINSILVPSLRPKVFNEPVIFLGVDVTHPPAGDNKKPSIAAVVGSMDAHPSRYAATVRVQQHRQEIVHEMSSMVQELLIMFYKSTGGFKPHRIIMYRDGISEGQFLHVLQHELTAVREACIKLEAEYKPGITFIVVQKRHHTRLFCADKKEQSGKSGNIPAGTTVDLGITHPTEFDFYLCSHQGIQGTSRPSHYHVLWDDNHFGSDELQCLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVEKEHDSGEGSHQSACSEDRTPGAMARAITVHAVTKKVMYFA

Similarity

Belongs to the argonaute family.

Uniprot

A7BJS5   A0A2W1BPD2   A0A2H1X4U0   A0A212F1Y9   A0A2A4JYG3   A0A194QTB9   + More
V9VID8   A0A0K0K6W5   A0A068FMW3   A0A1L7NZM4   S4W2D1   A0A2J7Q8V4   A0A182VI38   A0A1Q3EX36   A0A182MMT6   Q7PZ41   A0A182PC50   A0A2M4A125   A0A182YPP7   A0A140H4W5   A0A182R120   A0A1B6K9X2   A0A1Q3EX47   A0A182WEE7   A0A182IK43   A0A1Q3FUD2   A0A2M4A1E9   A0A2M4CUY7   A0A2M3YYB7   A0A2M4A169   A0A2M4A0Z3   A0A182FU29   A0A2M4BCD3   A0A084VGF5   A0A1J1JBJ0   B0WFU8   Q16M62   A0A0A7DW46   A0A2M4A141   A0A2M4BCN9   A0A1J1J8U3   A0A2M4BDJ2   A0A034VBE9   A0A140AQD1   A0A0K8VLS2   W8AQ30   A0A1B6E5P9   W5JJN9   W8BEF0   A0A0A1X6S8   A0A034V9U4   A0A1I8P065   A0A336L3W2   A0A0A1XHI9   A0A126G9H5   A0A2P1DM95   W8AI22   A0A1I8P069   A0A1I8P019   A0A1B6CM65   A0A0A9XP48   W0USM3   A0A1I8P072   A0A224XHV7   A0A023F578   K7Y0I3   A0A069DZM2   A0A1I8MP06   T1IBM6   A0A1I8MNY0   A0A1B0GAK3   A0A1A9X4B6   A0A1I8MNX9   A0A1A9UET4   U5EX88   A0A1L8DWT4   V5G667   A0A1A9ZQU5   A0A1L8DWU7   A0A1W4XJR1   A0A1I8MNX8   A0A139WDH0   A0A0B5GAE3   A0A0J9RCA0   A0A0R1DVL1   A0A0Q5W1K6   Q7KY08   A0A0J9RCE1   A0A1W4XKW9   A0A139WDH4   B4P449   B3NRF4   Q32KD4   A0A2P1DM76   A0A1W4XAG0   D6WVW4   A0A126G8E1   A0A2P1DM85   A0A2I6PIY4   A0A0J9RCA7  

Pubmed

19121390    28756777    22118469    26354079    28034629    23792802    + More
12364791    25244985    26864546    24438588    17510324    25348373    26868596    24495485    20920257    23761445    25830018    25401762    23974011    25474469    26334808    25315136    18362917    19820115    25541004    22936249    17994087    17550304    18057021    10731132    11318874    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    14615802    29267401   

EMBL

BABH01007742    AB332314    BAF73719.1    KZ150007    PZC75167.1    MG225441    + More
ODYU01013029    AVK59452.1    SOQ59654.1    AGBW02010786    OWR47741.1    NWSH01000356    PCG77061.1    KQ461150    KPJ08712.1    KF717084    AHC98009.1    JX481276    MG225442    AGS40929.1    AVK59453.1    KJ676101    AID68365.1    LC194145    BAW35367.1    KF006338    AGO85968.1    NEVH01016946    PNF25006.1    GFDL01015164    JAV19881.1    AXCM01002270    AXCM01002271    AAAB01008986    EAA00062.4    GGFK01001162    MBW34483.1    KT191021    AMN92166.1    AXCN02001648    AXCN02001649    GEBQ01031728    JAT08249.1    GFDL01015161    JAV19884.1    GFDL01003814    JAV31231.1    GGFK01001258    MBW34579.1    GGFL01004470    MBW68648.1    GGFM01000496    MBW21247.1    GGFK01001216    MBW34537.1    GGFK01001163    MBW34484.1    GGFJ01001565    MBW50706.1    ATLV01012873    KE524821    KFB37049.1    CVRI01000075    CRL08433.1    DS231921    EDS26483.1    CH477878    EAT35424.1    KF986386    AIY24636.1    GGFK01001215    MBW34536.1    GGFJ01001641    MBW50782.1    CRL08434.1    GGFJ01001890    MBW51031.1    GAKP01020079    JAC38873.1    KR012696    ALC79971.1    GDHF01030998    GDHF01026912    GDHF01016166    GDHF01012482    JAI21316.1    JAI25402.1    JAI36148.1    JAI39832.1    GAMC01018403    JAB88152.1    GEDC01016629    GEDC01004053    JAS20669.1    JAS33245.1    ADMH02001328    ETN62984.1    GAMC01018401    JAB88154.1    GBXI01007939    JAD06353.1    GAKP01020075    JAC38877.1    UFQS01001625    UFQT01001625    SSX11663.1    SSX31228.1    GBXI01004314    JAD09978.1    KR012695    ALC79970.1    MG225455    AVK59466.1    GAMC01018405    GAMC01018404    JAB88150.1    GEDC01022731    JAS14567.1    GBHO01023026    GBHO01023025    JAG20578.1    JAG20579.1    HF912424    CCV01212.1    GFTR01008264    JAW08162.1    GBBI01001991    JAC16721.1    JX679521    AFX89034.1    GBGD01000395    JAC88494.1    ACPB03013745    CCAG010006300    GANO01001068    JAB58803.1    GFDF01003154    JAV10930.1    GALX01002901    JAB65565.1    GFDF01003171    JAV10913.1    KQ971358    KYB25999.1    KP036491    AJF15704.1    CM002911    KMY93638.1    CM000158    KRJ99241.1    CH954179    KQS62662.1    KQS62664.1    AE013599    BT100007    AB035447    AAF58315.1    ACX54891.1    BAA88078.1    KMY93636.1    KYB26000.1    EDW90559.2    EDV56106.2    BT023945    BT125895    AAF58313.1    AAF58314.1    ABB36449.1    ADV19036.1    AFH08068.1    MG225425    AVK59436.1    EFA09197.2    KR012689    ALC79964.1    MG225424    AVK59435.1    MG266014    AUM60041.1    KMY93637.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053240    UP000235965    UP000075903    + More
UP000075883    UP000007062    UP000075885    UP000076408    UP000075886    UP000075920    UP000075880    UP000069272    UP000030765    UP000183832    UP000002320    UP000008820    UP000000673    UP000095300    UP000095301    UP000015103    UP000092444    UP000091820    UP000078200    UP000092445    UP000192223    UP000007266    UP000002282    UP000008711    UP000000803   

PRIDE

A7BJS5    Q7KY08    Q32KD4   

Pfam

PF16488   ArgoL2        + More
PF02170   PAZ
PF16486   ArgoN
PF02171   Piwi
PF08699   ArgoL1
PF16487   ArgoMid

Interpro

IPR032473   Argonaute_Mid_dom        + More
IPR012337   RNaseH-like_sf       
IPR032474   Argonaute_N       
IPR003165   Piwi       
IPR003100   PAZ_dom       
IPR032472   ArgoL2       
IPR014811   ArgoL1       
IPR036397   RNaseH_sf       
IPR036085   PAZ_dom_sf       

SUPFAM

SSF101690   SSF101690        + More
SSF53098   SSF53098       

Gene 3D

3.30.420.10    

ProteinModelPortal

A7BJS5   A0A2W1BPD2   A0A2H1X4U0   A0A212F1Y9   A0A2A4JYG3   A0A194QTB9   + More
V9VID8   A0A0K0K6W5   A0A068FMW3   A0A1L7NZM4   S4W2D1   A0A2J7Q8V4   A0A182VI38   A0A1Q3EX36   A0A182MMT6   Q7PZ41   A0A182PC50   A0A2M4A125   A0A182YPP7   A0A140H4W5   A0A182R120   A0A1B6K9X2   A0A1Q3EX47   A0A182WEE7   A0A182IK43   A0A1Q3FUD2   A0A2M4A1E9   A0A2M4CUY7   A0A2M3YYB7   A0A2M4A169   A0A2M4A0Z3   A0A182FU29   A0A2M4BCD3   A0A084VGF5   A0A1J1JBJ0   B0WFU8   Q16M62   A0A0A7DW46   A0A2M4A141   A0A2M4BCN9   A0A1J1J8U3   A0A2M4BDJ2   A0A034VBE9   A0A140AQD1   A0A0K8VLS2   W8AQ30   A0A1B6E5P9   W5JJN9   W8BEF0   A0A0A1X6S8   A0A034V9U4   A0A1I8P065   A0A336L3W2   A0A0A1XHI9   A0A126G9H5   A0A2P1DM95   W8AI22   A0A1I8P069   A0A1I8P019   A0A1B6CM65   A0A0A9XP48   W0USM3   A0A1I8P072   A0A224XHV7   A0A023F578   K7Y0I3   A0A069DZM2   A0A1I8MP06   T1IBM6   A0A1I8MNY0   A0A1B0GAK3   A0A1A9X4B6   A0A1I8MNX9   A0A1A9UET4   U5EX88   A0A1L8DWT4   V5G667   A0A1A9ZQU5   A0A1L8DWU7   A0A1W4XJR1   A0A1I8MNX8   A0A139WDH0   A0A0B5GAE3   A0A0J9RCA0   A0A0R1DVL1   A0A0Q5W1K6   Q7KY08   A0A0J9RCE1   A0A1W4XKW9   A0A139WDH4   B4P449   B3NRF4   Q32KD4   A0A2P1DM76   A0A1W4XAG0   D6WVW4   A0A126G8E1   A0A2P1DM85   A0A2I6PIY4   A0A0J9RCA7  

PDB

6CBD     E-value=0,     Score=3358

KEGG

100124421    K11593 eukaryotic translation initiation factor 2C | (RefSeq) Ago1; argonaute 1

GO

GO:0003676   GO:0031047   GO:0016246   GO:0051301   GO:0003743   GO:0005737   GO:0035198   GO:0005634   GO:0036099   GO:0006402   GO:0006342   GO:0035195   GO:0017148   GO:0019899   GO:0046959   GO:0007416   GO:1990904   GO:0007294   GO:0007367   GO:0030727   GO:0090328   GO:0035196   GO:0048471   GO:0030423   GO:0030422   GO:0035279   GO:0005515   GO:0008270   GO:0006228   GO:0006241   GO:0030286   GO:0005216   GO:0045211   GO:0006281   GO:0048384  

Length:

912

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.14049

Exp number, first 60 AAs:

0.13156

Total prob of N-in:

0.00474

outside

1  -  912

 

 

Pi

199.321638

Theta

190.934457

Tajima's D

0.183125

CLR

0.354143

CSRT

0.419979001049948

Interpretation

Uncertain