Silkworm Genome Informatics Database

Gene

KWMTBOMO02837

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101744003_[Bombyx_mori]

Location

Bomo_Chr5(-):12329722-12330675 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.821 Nuclear Reliability : 1.147

CDS

ATGCAGGATAACGCTCGTTGTCACACTGCCCGTGTAACAACTGTATACCTCGAAGAAGTCGGTATCGCCACATTGGACTGGCCAGCGCTCAGTCCTGACTTGAATCCCATTGAGCACGTGTGGAATGAACCGAAGAGGAAGTTTCGTTCCAGAACTCCTGCTCCTTCGTGTCTGAATGAGCTGAAATCGGCGTTGATTTACGAGTGGGAAGATGCAACAGCTAAAGTCAGGATTTTCACTCTTGTAATGGGTACTGGAACTCAGATCCGAGGCAAGAAGAAGCGATACACAGATCCTGAATACCATATATCTATAACAAAGATTCTGACTCCTGACCTGAAATCGAATCCCATCCCATTTTAA

Protein

MQDNARCHTARVTTVYLEEVGIATLDWPALSPDLNPIEHVWNEPKRKFRSRTPAPSCLNELKSALIYEWEDATAKVRIFTLVMGTGTQIRGKKKRYTDPEYHISITKILTPDLKSNPIPF

Uniprot

E2BZF3 R4FJ13 A0A060XEV2 A0A2W1C099 A0A1A7WB56 A0A3B5QMY4 + More
A0A1A7WG79 A0A1A7YAS8

Pubmed

20798317 24755649 28756777 23542700

EMBL

GL451606 EFN78924.1 GAHY01002463 JAA75047.1 FR905279 CDQ78001.1 + More
KZ149928 PZC77493.1 HADW01001545 SBP02945.1 HADW01003134 SBP04534.1 HADX01005375 HADX01006576 SBP27607.1 SBP28808.1

Proteomes

UP000008237 UP000193380 UP000002852

Pfam

PF13358 DDE_3 + More
PF01498 HTH_Tnp_Tc3_2

Interpro

IPR038717   Tc1-like_DDE_dom        + More
IPR002492   Transposase_Tc1-like
IPR009057   Homeobox-like_sf

SUPFAM

SSF46689 SSF46689

ProteinModelPortal

E2BZF3 R4FJ13 A0A060XEV2 A0A2W1C099 A0A1A7WB56 A0A3B5QMY4 + More
A0A1A7WG79 A0A1A7YAS8

PDB

5CR4 E-value=7.80008e-09, Score=137

KEGG

101744003 no KO assigned | (RefSeq) uncharacterized LOC101744003

GO

GO:0003677 GO:0015074 GO:0006313 GO:0016021

Length:

120

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03659

Exp number, first 60 AAs:

0.03007

Total prob of N-in:

0.62884

inside

1 - 120

Pi

116.887848

Theta

121.457686

Tajima's D

-0.081671

CLR

1.0979

CSRT

0.350232488375581

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree