Gene

KWMTBOMO02833

Pre Gene Modal

BGIBMGA003674

Annotation

PREDICTED:_ARL14_effector_protein_[Amyelois_transitella]

Location

Bomo_Chr5(-):12260325-12261925      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.995

CDS

ATGCGTTTCTTAGATAATTTTGATCCTAAAAATTCAGCTCGTGAACGTAGAAAAGCAAACAGGAAAAAATATTTCACTTCTCGAAAAGTGAAGAGAATTTATGATGACCACGGTCATATTGCTGAAACTGGCAAAGACTTGTGTGATTGCCTCGATGAGAAGTGTCCCGGATGCCATTTTCCATGTGCAAACTGCAATTCCAATAAATGTGGCCATGAGTGCAGAATTAACAGAAAATGGATGTATGACAAAATTGAAATAGAAGGAAATGATTTTGTTGTAAAAAATGATTACAAAAACAATTCACCATCTTCAGGAAGATCAGTACAATGA

Protein

MRFLDNFDPKNSARERRKANRKKYFTSRKVKRIYDDHGHIAETGKDLCDCLDEKCPGCHFPCANCNSNKCGHECRINRKWMYDKIEIEGNDFVVKNDYKNNSPSSGRSVQ

Uniprot

A0A2H1X2Z5   A0A2A4JYH9   A0A1E1VY65   A0A0L7KQZ0   A0A194PPQ8   A0A194QTC3   + More
S4NX01   A0A2P8YNK0   A0A2J7RLY5   A0A232EIT1   A0A0L8FTT9   K7J6P5   A0A0L8FW35   E2ATX9   A0A1Y1KQN6   A0A0J7KWE2   A0A0L7R0J9   A0A2T7NE43   A0A154PTQ7   A0A1S3J172   A0A1S3HC48   T1JDY0   K1RBN9   A0A210QDX8   A0A2A3EFX7   A0A087ZY72   Q16PA2   A0A310SB62   A0A0P4W191   A0A0P4W617   A0A151K0E6   F4WA22   U5EMS5   A0A182H8Z1   A0A158P1B4   A0A151XH41   B0WPI3   V4BHS1   A0A1Q3EYF7   A0A1B6G6T2   A0A1B6M0M1   W8CA77   A0A1B6H0G8   A0A1B6LJ75   A0A1B6F281   A0A151IG16   A0A0A1XK93   A0A1B6KYJ8   A0A034WL33   A0A1B6FSW4   A0A195DL67   A0A1B6FX66   A0A182PEY7   A0A1B6KTB7   A0A182L456   A0A182U1R4   A0A182I694   R7US39   A0A2C9LK12   A0A182QF41   A0A0B6ZD66   A0A182N7J8   A0NBN7   D3TR67   A0A182X233   A0A182M7M5   A0A1A9XQS2   A0A1A9V237   A0A1B0B5B6   A0A182VGL3   E2C223   A0A182YJJ1   D6X220   A0A182ST89   S4RAF7   C1BRI9   A0A084WLB3   C1C1H0   H2XJX3   A0A0K8TMI7   A0A2M3ZD44   A0A0P5R761   A0A2M4C339   A0A151MBQ3   H3IMN4   A0A182R999   A0A182K7A6   A0A3Q0J7S1   C3YPW5   W5JS03   A0A2M3ZDH6   A0A1D5P8F4   A0A3L8RXW8   H0Z2X9   A0A218UIN8   A0A093JNP7   V9LIE8   A0A2M4B055  

Pubmed

26227816    26354079    23622113    29403074    28648823    20075255    + More
20798317    28004739    26383154    22992520    28812685    17510324    21719571    26483478    21347285    23254933    24495485    25830018    25348373    20966253    15562597    12364791    14747013    17210077    20353571    25244985    18362917    19820115    24438588    12481130    15114417    26369729    22293439    18563158    20920257    23761445    30282656    20360741    24402279   

EMBL

ODYU01013029    SOQ59647.1    NWSH01000356    PCG77075.1    GDQN01011430    JAT79624.1    + More
JTDY01007072    KOB65476.1    KQ459597    KPI94958.1    KQ461150    KPJ08717.1    GAIX01012357    JAA80203.1    PYGN01000467    PSN45826.1    NEVH01002584    PNF41845.1    NNAY01004159    OXU18270.1    KQ426561    KOF68111.1    KQ425863    KOF68913.1    GL442747    EFN63110.1    GEZM01076653    JAV63723.1    LBMM01002593    KMQ94603.1    KQ414670    KOC64377.1    PZQS01000013    PVD19436.1    KQ435090    KZC14580.1    JH432114    JH817943    EKC43158.1    NEDP02004063    OWF46967.1    KZ288266    PBC30119.1    CH477789    EAT36200.1    KQ773583    OAD52373.1    GDRN01080635    JAI62173.1    GDRN01080637    JAI62172.1    KQ981301    KYN43045.1    GL888037    EGI68952.1    GANO01004370    JAB55501.1    JXUM01119679    JXUM01134661    KQ568156    KQ566315    KXJ69118.1    KXJ70244.1    ADTU01006206    KQ982138    KYQ59677.1    DS232024    EDS32371.1    KB199650    ESP05402.1    GFDL01014714    JAV20331.1    GECZ01011621    JAS58148.1    GEBQ01010494    JAT29483.1    GAMC01001524    JAC05032.1    GECZ01001622    JAS68147.1    GEBQ01016279    JAT23698.1    GECZ01025410    GECZ01020888    JAS44359.1    JAS48881.1    KQ977743    KYN00161.1    GBXI01002940    JAD11352.1    GEBQ01023460    JAT16517.1    GAKP01003588    JAC55364.1    GECZ01016558    JAS53211.1    KQ980762    KYN13582.1    GECZ01014984    JAS54785.1    GEBQ01025297    JAT14680.1    APCN01003597    AMQN01007335    KB300467    ELU06727.1    AXCN02000576    HACG01019588    CEK66453.1    AAAB01008807    EAU77707.2    EZ423919    ADD20195.1    AXCM01001374    JXJN01008672    GL452067    EFN77974.1    KQ971371    EFA09931.1    BT077218    ACO11642.1    ATLV01024211    KE525350    KFB51007.1    BT080699    ACO15123.1    EAAA01001876    GDAI01002034    JAI15569.1    GGFM01005668    MBW26419.1    GDIQ01104713    JAL47013.1    GGFJ01010528    MBW59669.1    AKHW03006283    KYO21945.1    AAGJ04083040    AAGJ04101644    GG666539    EEN57603.1    ADMH02000632    ETN65519.1    GGFM01005808    MBW26559.1    QUSF01000131    RLV90076.1    ABQF01124459    ABQF01124460    MUZQ01000279    OWK53613.1    KK579102    KFW12469.1    JW880004    AFP12521.1    GGFK01013096    MBW46417.1   

Proteomes

UP000218220    UP000037510    UP000053268    UP000053240    UP000245037    UP000235965    + More
UP000215335    UP000053454    UP000002358    UP000000311    UP000036403    UP000053825    UP000245119    UP000076502    UP000085678    UP000005408    UP000242188    UP000242457    UP000005203    UP000008820    UP000078541    UP000007755    UP000069940    UP000249989    UP000005205    UP000075809    UP000002320    UP000030746    UP000078542    UP000078492    UP000075885    UP000075882    UP000075902    UP000075840    UP000014760    UP000076420    UP000075886    UP000075884    UP000007062    UP000076407    UP000075883    UP000092443    UP000078200    UP000092460    UP000075903    UP000008237    UP000076408    UP000007266    UP000075901    UP000245300    UP000030765    UP000008144    UP000050525    UP000007110    UP000075900    UP000075881    UP000079169    UP000001554    UP000000673    UP000276834    UP000007754    UP000197619   

Pfam

PF14949   ARF7EP_C        + More
PF00105   zf-C4
PF05225   HTH_psq
PF07841   DM4_12
PF05485   THAP

Interpro

IPR029264   ARF7EP_C        + More
IPR026515   ARL14EP       
IPR006600   HTH_CenpB_DNA-bd_dom       
IPR001628   Znf_hrmn_rcpt       
IPR013088   Znf_NHR/GATA       
IPR009057   Homeobox-like_sf       
IPR007889   HTH_Psq       
IPR006631   DM4_12       
IPR038441   THAP_Znf_sf       
IPR006612   THAP_Znf       

SUPFAM

SSF46689   SSF46689       

Gene 3D

3.30.50.10     3.30.40.180    

ProteinModelPortal

A0A2H1X2Z5   A0A2A4JYH9   A0A1E1VY65   A0A0L7KQZ0   A0A194PPQ8   A0A194QTC3   + More
S4NX01   A0A2P8YNK0   A0A2J7RLY5   A0A232EIT1   A0A0L8FTT9   K7J6P5   A0A0L8FW35   E2ATX9   A0A1Y1KQN6   A0A0J7KWE2   A0A0L7R0J9   A0A2T7NE43   A0A154PTQ7   A0A1S3J172   A0A1S3HC48   T1JDY0   K1RBN9   A0A210QDX8   A0A2A3EFX7   A0A087ZY72   Q16PA2   A0A310SB62   A0A0P4W191   A0A0P4W617   A0A151K0E6   F4WA22   U5EMS5   A0A182H8Z1   A0A158P1B4   A0A151XH41   B0WPI3   V4BHS1   A0A1Q3EYF7   A0A1B6G6T2   A0A1B6M0M1   W8CA77   A0A1B6H0G8   A0A1B6LJ75   A0A1B6F281   A0A151IG16   A0A0A1XK93   A0A1B6KYJ8   A0A034WL33   A0A1B6FSW4   A0A195DL67   A0A1B6FX66   A0A182PEY7   A0A1B6KTB7   A0A182L456   A0A182U1R4   A0A182I694   R7US39   A0A2C9LK12   A0A182QF41   A0A0B6ZD66   A0A182N7J8   A0NBN7   D3TR67   A0A182X233   A0A182M7M5   A0A1A9XQS2   A0A1A9V237   A0A1B0B5B6   A0A182VGL3   E2C223   A0A182YJJ1   D6X220   A0A182ST89   S4RAF7   C1BRI9   A0A084WLB3   C1C1H0   H2XJX3   A0A0K8TMI7   A0A2M3ZD44   A0A0P5R761   A0A2M4C339   A0A151MBQ3   H3IMN4   A0A182R999   A0A182K7A6   A0A3Q0J7S1   C3YPW5   W5JS03   A0A2M3ZDH6   A0A1D5P8F4   A0A3L8RXW8   H0Z2X9   A0A218UIN8   A0A093JNP7   V9LIE8   A0A2M4B055  

PDB

4OGE     E-value=0.06665,     Score=77

KEGG

101736855    no KO assigned | (RefSeq) ARL14 effector protein-like

GO

GO:0043565   GO:0008270   GO:0003700   GO:0005634   GO:0003677   GO:0043231   GO:0005886   GO:0005730   GO:0005829   GO:0005925  

PANTHER

PTHR46536  

Length:

110

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.13157

outside

1  -  110

 

 

Pi

195.547378

Theta

188.861225

Tajima's D

0.116843

CLR

0.000984

CSRT

0.4014799260037

Interpretation

Uncertain