Gene

KWMTBOMO02832

Annotation

PREDICTED:_nucleoside_diphosphate_kinase_7-like_[Papilio_machaon]

Location

Bomo_Chr5(+):12254826-12258382      View in EpiBrowser

Full name

Nucleoside diphosphate kinase 7       + More
Nucleoside diphosphate kinase      

Location in the cell

Cytoplasmic   Reliability : 1.357

CDS

ATGGTATACGACTACTTTGATAAATATAGTTTCTTGTGTGAAATGTATGATGAGGATGCTGACGAAATAAAAGATTTAACCCTCAATTATTTTCCATTTGACAATTCGGTTCAAATAATAGACGCGAAGAAAGGCAAAAATGTTTTGAAACGAGTACAACTACCACCATTAAATTTAGATATGTTACAAATCGGTAATATAGTTAATATATTTTCAAAATTATTATATATCAAGGATTGCGCTCCTGCTACACGGAAAACGCTTTTCAAAAATGTGCAAAGGATAATCATAGATTATGTTACTACTGGTGAAGTTATAGGACTAGAGCTTGTTGCACCGGATGCAGTTACAAAATGGCGACAGTGCCTAGGAGCTACAGACCCTACTGAAGCTGCCCCTGGAACTCTGCGAAACCTTTATGGCGAGAACAAACTGAAGAACGTAGCACACGGCTGTAATACATCGGAGGATGCAGCAAAGATGTTGGAATTATTTTTTGGTTATGAAAAAGGAATACCCAGGGTTCCATTTAGAGCTACATTCAAAAATTGCACATGCTGTGTTATTAAGCCCCACGCAGTAATTGAAGGAAATATCGGTTCTATTTTGGAACAAATCTCAACCTCTGGAAAATTCTTTATATCAGCTATGGCTATGTTCTCAGTTAAGCTTGCAAATGCAACAGAATTTTTTGAAGTTTACAAAGGAGTCCTCCCTGAATACGAGGTAAGTACCTAA

Protein

MVYDYFDKYSFLCEMYDEDADEIKDLTLNYFPFDNSVQIIDAKKGKNVLKRVQLPPLNLDMLQIGNIVNIFSKLLYIKDCAPATRKTLFKNVQRIIIDYVTTGEVIGLELVAPDAVTKWRQCLGATDPTEAAPGTLRNLYGENKLKNVAHGCNTSEDAAKMLELFFGYEKGIPRVPFRATFKNCTCCVIKPHAVIEGNIGSILEQISTSGKFFISAMAMFSVKLANATEFFEVYKGVLPEYEVST

Catalytic Activity

a 2'-deoxyribonucleoside 5'-diphosphate + ATP = a 2'-deoxyribonucleoside 5'-triphosphate + ADP

Cofactor

Mg(2+)

Similarity

Belongs to the NDK family.

Uniprot

H9J1Y1   A0A2H1W5P7   A0A194QT68   A0A2W1BJB7   A0A2A4JZK6   A0A212F1X8   + More
A0A0L7KQA5   A0A2J7QC50   A0A0P7XEK0   A0A091IJU8   A0A0L0DHW9   A0A3M0KFR1   A0A093HFR2   A0A0N1ITX7   A0A1D5QPI5   A0A2I3MHI5   V8P2S7   A0A087ZWW7   A0A0L7R3P5   A0A2I3T0I5   A0A2I2YDE0   D6WT68   A0A093Q6G1   A0A2B4S5Z9   A0A1L8HF79   A0A210R3D6   A0A2W1BTV9   A0A093QRW9   R7TZK1   A0A091H859   A0A087QL97   A0A3M6U4N2   A0A091MKC2   A0A091GGM1   A0A0B8RQY0   A0A2I4CES8   A0A1S3HGT8   W5KX55   A0A094LX56   A0A2A4JZY2   A0A093NC00   A0A091SD70   A0A091U8Q9   W5MPS5   W5MPT6   A0A091J7A2   A0A091WFW7   A0A026VWD2   G1SRW2   H0X1U7   Q6P7M5   U3JT81   A0A093FZH2   A0A3B4U418   I3MHE9   A0A091V561   A0A091P3E3   G1PF25   A0A3B3BBC8   A0A1A7WA80   A0A1A7YND7   A0A093HYL6   T1DK16   A0A3B5A933   A0A0F7Z7B9   A0A091EM88   A0A0A0AZK0   L1JUJ4   H0V2N4   A0A146NSG3   G3VTT6   G5CB50   A0A0P6J402   A0A2U9C736   A0A1W4XZD6   A0A1W4Y9E7   G3VTT7   A0A093CFB3   A0A3B4D717   F6Q3R3   H2MLS7   A0A091DFU6   A0A340XDJ7   A0A3P9I4A5   A0A3P9LEE9   A0A3B3RQ08  

EC Number

2.7.4.6

Pubmed

19121390    26354079    28756777    22118469    26227816    17431167    + More
24297900    16136131    22398555    18362917    19820115    27762356    28812685    23254933    30382153    25476704    25329095    24508170    21993624    20431018    29451363    23758969    25727380    23201678    21709235    21993625    17495919    17554307    29240929   

EMBL

BABH01007750    BABH01007751    ODYU01006495    SOQ48378.1    KQ461150    KPJ08718.1    + More
KZ150007    PZC75172.1    NWSH01000356    PCG77074.1    AGBW02010786    OWR47736.1    JTDY01007072    KOB65477.1    NEVH01016292    PNF26166.1    JARO02002007    KPP73842.1    KL218732    KFP07655.1    GL349463    KNC50898.1    QRBI01000107    RMC11885.1    KL206341    KFV81453.1    KQ435726    KOX78158.1    JSUE03003452    JSUE03003453    JSUE03003454    AHZZ02017791    AHZZ02017792    AHZZ02017793    AHZZ02017794    AHZZ02017795    AHZZ02017796    AZIM01000987    ETE68575.1    KQ414663    KOC65507.1    AACZ04056276    AACZ04056277    AACZ04056278    CABD030007185    CABD030007186    CABD030007187    CABD030007188    CABD030007189    CABD030007190    CABD030007191    KQ971354    EFA07171.1    KL670595    KFW79792.1    LSMT01000176    PFX24463.1    CM004468    OCT94742.1    NEDP02000661    OWF55446.1    PZC75173.1    KL431041    KFW91628.1    AMQN01010045    KB306898    ELT99378.1    KL527324    KFO91629.1    KL225737    KFM02001.1    RCHS01002246    RMX48630.1    KK507946    KFP62010.1    KL447417    KFO73267.1    GBSH01001771    JAG67255.1    KL282806    KFZ67954.1    PCG77073.1    KL224604    KFW61686.1    KK469186    KFQ56479.1    KK420566    KFQ86452.1    AHAT01003407    AHAT01003408    AHAT01003409    AHAT01003410    KK501540    KFP15718.1    KK735517    KFR14602.1    KK107770    EZA47831.1    AAGW02000082    AAGW02000083    AAGW02000084    AAGW02000085    AAQR03038934    AAQR03038935    AAQR03038936    AAQR03038937    AAQR03038938    AAMC01049945    AAMC01049946    AAMC01049947    AAMC01049948    AAMC01049949    BC061605    AAH61605.1    AGTO01021281    KL214899    KFV62238.1    AGTP01015068    AGTP01015069    KL410714    KFQ98431.1    KK650367    KFQ01403.1    AAPE02039014    HADW01001036    SBP02436.1    HADX01009427    SBP31659.1    KK637950    KFV59558.1    GAAZ01001583    GBKC01002327    GBKD01001416    JAA96360.1    JAG43743.1    JAG46202.1    GBEX01002189    JAI12371.1    KK718610    KFO57722.1    KL873387    KGL98555.1    JH992974    EKX51984.1    AAKN02037427    AAKN02037428    AAKN02037429    AAKN02037430    AAKN02037431    AAKN02037432    GCES01152216    JAQ34106.1    AEFK01155615    AEFK01155616    AEFK01155617    AEFK01155618    AEFK01155619    AEFK01155620    AEFK01155621    JH194173    EHB18761.1    GEBF01005558    JAN98074.1    CP026254    AWP11419.1    KL461279    KFV13123.1    KN122647    KFO29130.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000007151    UP000037510    UP000235965    + More
UP000034805    UP000054308    UP000054408    UP000269221    UP000053584    UP000053105    UP000006718    UP000028761    UP000005203    UP000053825    UP000002277    UP000001519    UP000007266    UP000053258    UP000225706    UP000186698    UP000242188    UP000014760    UP000053286    UP000275408    UP000053760    UP000192220    UP000085678    UP000018467    UP000054081    UP000018468    UP000053119    UP000053605    UP000053097    UP000001811    UP000005225    UP000008143    UP000016665    UP000053875    UP000261420    UP000005215    UP000053283    UP000001074    UP000261560    UP000261400    UP000052976    UP000053858    UP000011087    UP000005447    UP000265000    UP000007648    UP000006813    UP000246464    UP000192224    UP000261440    UP000002280    UP000001038    UP000028990    UP000265300    UP000265200    UP000265180    UP000261540   

PRIDE

H9J1Y1   

Pfam

PF00334   NDK        + More
PF06565   DUF1126

Interpro

IPR036850   NDK-like_dom_sf        + More
IPR037993   NDPk7B       
IPR011410   NDPK7       
IPR006602   Uncharacterised_DM10       
IPR034907   NDK-like_dom       
IPR001564   Nucleoside_diP_kinase       
IPR010554   DUF1126       
IPR023005   Nucleoside_diP_kinase_AS       
IPR035525   NDPk7A       

SUPFAM

SSF54919   SSF54919       

Gene 3D

3.30.70.141    

CDD

cd04412  NDPk7B
cd04415  NDPk7A

ProteinModelPortal

H9J1Y1   A0A2H1W5P7   A0A194QT68   A0A2W1BJB7   A0A2A4JZK6   A0A212F1X8   + More
A0A0L7KQA5   A0A2J7QC50   A0A0P7XEK0   A0A091IJU8   A0A0L0DHW9   A0A3M0KFR1   A0A093HFR2   A0A0N1ITX7   A0A1D5QPI5   A0A2I3MHI5   V8P2S7   A0A087ZWW7   A0A0L7R3P5   A0A2I3T0I5   A0A2I2YDE0   D6WT68   A0A093Q6G1   A0A2B4S5Z9   A0A1L8HF79   A0A210R3D6   A0A2W1BTV9   A0A093QRW9   R7TZK1   A0A091H859   A0A087QL97   A0A3M6U4N2   A0A091MKC2   A0A091GGM1   A0A0B8RQY0   A0A2I4CES8   A0A1S3HGT8   W5KX55   A0A094LX56   A0A2A4JZY2   A0A093NC00   A0A091SD70   A0A091U8Q9   W5MPS5   W5MPT6   A0A091J7A2   A0A091WFW7   A0A026VWD2   G1SRW2   H0X1U7   Q6P7M5   U3JT81   A0A093FZH2   A0A3B4U418   I3MHE9   A0A091V561   A0A091P3E3   G1PF25   A0A3B3BBC8   A0A1A7WA80   A0A1A7YND7   A0A093HYL6   T1DK16   A0A3B5A933   A0A0F7Z7B9   A0A091EM88   A0A0A0AZK0   L1JUJ4   H0V2N4   A0A146NSG3   G3VTT6   G5CB50   A0A0P6J402   A0A2U9C736   A0A1W4XZD6   A0A1W4Y9E7   G3VTT7   A0A093CFB3   A0A3B4D717   F6Q3R3   H2MLS7   A0A091DFU6   A0A340XDJ7   A0A3P9I4A5   A0A3P9LEE9   A0A3B3RQ08  

PDB

3VVT     E-value=3.1314e-11,     Score=162

KEGG

101736725    K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] | (RefSeq) nucleoside diphosphate kinase 7-like

PATHWAY

00230    Purine metabolism - Bombyx mori (domestic silkworm)
00240    Pyrimidine metabolism - Bombyx mori (domestic silkworm)
00983    Drug metabolism - other enzymes - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0004550   GO:0005524   GO:0006183   GO:0006228   GO:0006241   GO:0016021   GO:0005813   GO:0006165   GO:0030286   GO:0005216   GO:0045211   GO:0006281   GO:0048384  

PANTHER

PTHR43109  

Length:

245

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.33449

Exp number, first 60 AAs:

0.02076

Total prob of N-in:

0.09684

outside

1  -  245

 

 

Pi

216.426261

Theta

178.203624

Tajima's D

0.741755

CLR

1.087664

CSRT

0.579971001449928

Interpretation

Uncertain