SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02818
Pre Gene Modal
BGIBMGA003683
Annotation
cytochrome_P450_monooxygenase_Cyp4M5_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 2.944
 

Sequence

CDS
ATGTTCGTTTACTTGATATTTATCGCTTCGTTTTTCTTATTAATTCATTTAGCTTTCAATTATAATTCGAAAGCTGTGATGATGAATAAAGTTCCTGGTCCAAAGTTGTCGTTCATTCTCGGGAATGCACCAGAGATAATGATGTTGTCATCAGTTGAGTTAATGAAACTGGCCAGGAAATTCGCAAGTCGCTGGGATGGAATATATAGGATTTGGGCGTTTCCTTTGTCCATTATAAATATATACAATCCGGATGACGTAGAGGTGATAGTTTCGACCACAAAACACAACGAAAAGAGTTCTGTGTATAAATTTTTGAAGCCGTGGCTTGGGGATGGATTGCTAATAAGTAAAGGAGAAAAATGGCAGCAAAGAAGAAAAATCCTTACGCCCGCTTTCCACTTCAATATCTTGCGACAGTTCAGTGTCATAATTGAAGAAAATTCTCAACGTTTGGTGGAATCATTGGAGAAATGCATCGGAAAACCTATAGACATAGTACCTGTAGTATCAGAGTATACACTGAATTCCATTTGTGAGACCTCAATGGGCACTCAACTAAGCGACAAAACAGAAGATGCGTGGAAGGCATACAAGGACGCCATATATGAGCTCGGACCGTACTTCTTTCAAAGATTCACTAGGGTTTATTTATATTTTGACATTATCTTCTATTTAACATCTTTATGGAGAAAAATGAAAAAACCTTTAAAGTCACTCCACGGATTTACTTCTACCGTTATAAAAGAAAGGAAAATTTACGTTGAACAAAATGGTGTTAAATTCGGCGAGGACGTCAACGATGATGACCTTTACATATACAAAAAGAGGAGAAAAACTGCCATGCTGGATTTACTGATAGCTGCGCAAAAAGACGGAGAGATCGACGATCACGGAATACAGGAAGAAGTGGACACTTTTATGTTCGAAGGTCACGATACCACTGCGTCTGGATTGACATTTTGTTTTATGCTACTCGCCAATCACAGAGCAGTTCAGGATAAGATTGTGGAAGAAATAAATGATATTATGGGAGATTCAACTCGACGCGCGAACTTGGAGGACTTGTCCAAGATGAAGTACTTGGAATGTTGCATTAAGGAGTCTTTAAGACTATATCCACCTGTGCATTTTATTAGCCGTAACTTAAACGAGCCTGTTGTTTTAAGTAACTATGAAATACCCGCCGGTTCGTTCTGCCACATTCACATCTTCGACCTTCATCGACGCGCCGACATATACGAAGATCCACTAGTCTACGATCCAGATCGGTTCTCTCAAGAAAACAGCAAAGGACGACATCCGTACGCATACATACCATTCAGTGCTGGACCGAGAAATTGCATTGGTCAAAAATTCGCCATGATAGAAATGAAATCTGCCGTTGCTGAAGTACTGCGAAAATACGAACTTGTGCCGGTAACGCGTCCTTCAGAAATTGAACTTATTGCCGACATCATACTGAGGAACTCTGGCCCGGTTGAGATTACATTTAATAAAAGGACCAAATAA
Protein
MFVYLIFIASFFLLIHLAFNYNSKAVMMNKVPGPKLSFILGNAPEIMMLSSVELMKLARKFASRWDGIYRIWAFPLSIINIYNPDDVEVIVSTTKHNEKSSVYKFLKPWLGDGLLISKGEKWQQRRKILTPAFHFNILRQFSVIIEENSQRLVESLEKCIGKPIDIVPVVSEYTLNSICETSMGTQLSDKTEDAWKAYKDAIYELGPYFFQRFTRVYLYFDIIFYLTSLWRKMKKPLKSLHGFTSTVIKERKIYVEQNGVKFGEDVNDDDLYIYKKRRKTAMLDLLIAAQKDGEIDDHGIQEEVDTFMFEGHDTTASGLTFCFMLLANHRAVQDKIVEEINDIMGDSTRRANLEDLSKMKYLECCIKESLRLYPPVHFISRNLNEPVVLSNYEIPAGSFCHIHIFDLHRRADIYEDPLVYDPDRFSQENSKGRHPYAYIPFSAGPRNCIGQKFAMIEMKSAVAEVLRKYELVPVTRPSEIELIADIILRNSGPVEITFNKRTK

Summary

Similarity
Belongs to the cytochrome P450 family.
EMBL
AK289282    BAM73809.1    EF523434    ABP87671.1    AK289281    BAM73808.1    + More
EF528484    ABP99018.1    AB498590    BAI45222.1    EU273876    ABX64439.1    KF668286    AHC02483.1    BABH01007780    BABH01007781    GU731525    ADE05575.1    KZ150007    PZC75158.1    AY113687    AAM54722.1    NWSH01000604    PCG75376.1    KM016729    AID54881.1    PZC75157.1    KM016728    AID54880.1    PCG75379.1    KX008607    ANC90156.1    ODYU01000355    SOQ34985.1    SOQ34986.1    DQ352137    ABC72321.2    AY113688    AAM54723.1    KM016730    AID54882.1    KX443467    ASO98042.1    PZC75159.1    KX443466    ASO98041.1    PCG75378.1    KX443469    ASO98044.1    KX443468    ASO98043.1    KP001139    AJN91184.1    FN356972    CAX94850.1    KF701164    AHW57334.1    KF701163    AHW57333.1    L38671    AAC21661.1    KQ461150    KPJ08736.1    GU731526    ADE05576.1    MF684340    ASX93974.1    KQ459597    KPI94937.1    AK289283    BAM73810.1    EF017797    ABK27872.1    EF017796    ABK27871.1    AGBW02010786    OWR47720.1    KY212038    ARA91602.1    MF684339    ASX93973.1    KP001143    AJN91188.1    GU731527    ADE05577.1    GDQN01006741    JAT84313.1    KY212037    ARA91601.1    JTDY01008387    KOB64592.1    AGBW02011790    OWR46123.1    GDQN01009628    GDQN01002954    JAT81426.1    JAT88100.1    KQ759878    OAD62263.1    KQ435012    KZC13846.1    OWR47721.1    KX609525    ARN17932.1    NWSH01001487    PCG71104.1    KPI94938.1    KQ971372    EFA10753.1    KQ458981    KPJ04476.1    NNAY01000622    OXU27342.1    KP859403    AKZ17713.1    KK107437    EZA50814.1    AY063500    AAL48299.1    AK403264    BAM19668.1    QOIP01000010    RLU17587.1    GFDF01000569    JAV13515.1    AF254755    AAF70496.1    EFA10755.1    GDQN01008735    GDQN01003028    GDQN01001407    JAT82319.1    JAT88026.1    JAT89647.1    KP859401    AKZ17711.1    AY337337    AAP94192.1    EFA10752.1    QOIP01000001    RLU27442.1    KQ460882    KPJ11479.1    KP859402    AKZ17712.1    EF591060    ABU88427.1    KPJ08735.1    KM016732    KZ150005    AID54884.1    PZC75222.1    PZC75221.1    DQ355383    ABC84370.2    KQ460479    KPJ14362.1    AK343220    BAM73902.1    KM016731    AID54883.1    AK289284    BAM73811.1    KZ288296    PBC28936.1    ADTU01007893    ADTU01007894    EFA10757.1    NNAY01004274    OXU18121.1    KQ414664    KOC65199.1    GEZM01042998    JAV79399.1    EFA10754.1    QOIP01000012    RLU15860.1    KP058451    AKP80586.1    KM006494    AJW31562.1    NNAY01002731    OXU20676.1   
Pfam
PF00067   p450        + More
PF00001   7tm_1
Interpro
IPR001128   Cyt_P450        + More
IPR017972   Cyt_P450_CS       
IPR002401   Cyt_P450_E_grp-I       
IPR036396   Cyt_P450_sf       
IPR002403   Cyt_P450_E_grp-IV       
IPR000276   GPCR_Rhodpsn       
IPR017452   GPCR_Rhodpsn_7TM       
SUPFAM
SSF48264   SSF48264       
Gene 3D
PDB
6C94     E-value=3.34534e-77,     Score=735

Ontologies

Topology

SignalP
Position:   1 - 25,         Likelihood:  0.530090
 
 
Length:
503
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
26.13114
Exp number, first 60 AAs:
20.2845
Total prob of N-in:
0.74016
POSSIBLE N-term signal
sequence
inside
1  -  1
TMhelix
2  -  19
outside
20  -  503
 
 

Population Genetic Test Statistics

Pi
21.203972
Theta
152.000981
Tajima's D
1.004183
CLR
1.003374
CSRT
0.664716764161792
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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