SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02817
Annotation
cytochrome_P450_CYP4M9_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 1.822
 

Sequence

CDS
ATGTGGATGTACTTTATTCTTATTTTACTACTGTTGCTTACAATTCATTTCTTGTTAAATTATAACTACAGAGCTAGATTACTTAGAAGAATTCCGGGACCAAGAGGTTATTTCATCGTTGGAAATGCCTTGGATGTTATTTTGTCACCAGCTGAATTATTCGCATCGACAAGAAAAAATGCAGCCCAATGGCCGAATTTAAATAGATTTTGGTCTTTTGGTATAGGAGCCTTAAATATATACGGACCCGATGAAATTGAGGCTATTATTTCAAGCACACAACATATTACAAAGAGTCCTGTGTACAACTTTTTGAGTGATTGGCTACGAGACGGATTACTTTTGAGTACAGGTACGAAATGGCAAAAACGAAGAAAAATACTGACACCAGCTTTTCATTTCAACATTTTGAAGCAGTTCTGTGTCATTCTGGAAGAAAATAGTCAGCGTTTTACTGAGAATCTAAAGGACACTGAGGGCAAAAGTATTAATGTTGTTCCTGCTATCTCGGAGTACACACTTCATTCAATTTGCGAAACTGCAATGAGAACCCAACTTGGTAGCGAAACGTCTGAAGCAGGAAGATCATATAAGAATGCTATATGTGAGCTCGGAAACCAATTCGTGCACAGACTAGCTAGATTACCTCTCCACAACAACTTCATTTACAACTTGTACACACTGGGAAAGCAAAATAAACACTTAAACATAGTTCATAGCTTCACTAAAAAAGTAATAAAAGATCGCCGTCAATACATAAGAGGGAACGGAGGTAATAATTTTGACGATGAAAAAGACACACAAGCTGACGAACATTCCATTTATTTTAACAAGAAAAAAACAGCTATGTTGGATCTCCTGCTAAAGGCAGAACGAGATGGATTAATTGACGAAATTGGCGTTCAAGAAGAAATCGACACATTCATGTTTGAAGGTCACGACACTACTGCTACCGGATTAACTTATTGCATTATGTTGATAGCAAACCACAAATCAATTCAAGATAAAATAATTGAAGAATTGGATGAAATTTTCGGTGAATCAACGAGAGCCGCTGACATAGAAGATCTATCTAAAATGCGCTATTTAGAAAGGTGCATCAAAGAATCTTTACGATTATATCCACCGGTACCATCAATGGGCCGTATTTTAAGCGAAGAAATCAACCTCAATGGTTACACCGTACCAGCCGGGACCTACTGTCATATTCAAATATTTGACTTACACCGCCGCGAGGATTTGTTCAAAGATCCTCTTGTGTTTGACCCGGACCGTTTCTTACCACATAACACCGAAGGCCGACACCCTTACGCTTACATACCTTTTAGCGCTGGACCCAGAAATTGCATAGGTCAGAAATTTGCCATACTCGAGATGAAGTCTCTTCTGTCTGCTGTATTGCGTCGTTACAATCTGTATCCAATAACCAAACCGGAAGATCTTAAATTTGTTCTAGATCTAGTTTTAAGGACAACGGAACCGGTTCACGTTAGATTTGTGAAGAGAAATAAAGTATAG
Protein
MWMYFILILLLLLTIHFLLNYNYRARLLRRIPGPRGYFIVGNALDVILSPAELFASTRKNAAQWPNLNRFWSFGIGALNIYGPDEIEAIISSTQHITKSPVYNFLSDWLRDGLLLSTGTKWQKRRKILTPAFHFNILKQFCVILEENSQRFTENLKDTEGKSINVVPAISEYTLHSICETAMRTQLGSETSEAGRSYKNAICELGNQFVHRLARLPLHNNFIYNLYTLGKQNKHLNIVHSFTKKVIKDRRQYIRGNGGNNFDDEKDTQADEHSIYFNKKKTAMLDLLLKAERDGLIDEIGVQEEIDTFMFEGHDTTATGLTYCIMLIANHKSIQDKIIEELDEIFGESTRAADIEDLSKMRYLERCIKESLRLYPPVPSMGRILSEEINLNGYTVPAGTYCHIQIFDLHRREDLFKDPLVFDPDRFLPHNTEGRHPYAYIPFSAGPRNCIGQKFAILEMKSLLSAVLRRYNLYPITKPEDLKFVLDLVLRTTEPVHVRFVKRNKV

Summary

Similarity
Belongs to the cytochrome P450 family.
EMBL
AK289283    BAM73810.1    EF017796    ABK27871.1    EF017797    ABK27872.1    + More
L38671    AAC21661.1    GU731526    ADE05576.1    KF701163    AHW57333.1    KM016728    AID54880.1    NWSH01000604    PCG75379.1    KZ150007    PZC75157.1    GU731525    ADE05575.1    KX443466    ASO98041.1    EF523434    ABP87671.1    AK289282    BAM73809.1    DQ352137    ABC72321.2    AK289281    BAM73808.1    EU273876    ABX64439.1    EF528484    ABP99018.1    AB498590    BAI45222.1    ODYU01000355    SOQ34985.1    SOQ34986.1    KX443467    ASO98042.1    KX008607    ANC90156.1    KF701164    AHW57334.1    FN356972    CAX94850.1    KP001139    AJN91184.1    KX443468    ASO98043.1    AY113688    AAM54723.1    AY113687    AAM54722.1    PZC75159.1    KM016730    AID54882.1    PZC75158.1    KF668286    AHC02483.1    KM016729    AID54881.1    PCG75378.1    PCG75376.1    KQ461150    KPJ08736.1    KX443469    ASO98044.1    MF684340    ASX93974.1    MF684339    ASX93973.1    KQ459597    KPI94937.1    AGBW02010786    OWR47720.1    KY212038    ARA91602.1    GDQN01006741    JAT84313.1    AGBW02011790    OWR46123.1    GU731527    ADE05577.1    BABH01007780    BABH01007781    GDQN01009628    GDQN01002954    JAT81426.1    JAT88100.1    NWSH01001487    PCG71104.1    KY212037    ARA91601.1    KPI94938.1    NNAY01002731    OXU20676.1    KP001143    AJN91188.1    AAZX01000970    KX609525    ARN17932.1    KPJ08735.1    EF591060    ABU88427.1    KZ150005    PZC75221.1    NNAY01004274    OXU18121.1    KX443461    ASO98036.1    KP859402    AKZ17712.1    JX310089    AFP20600.1    KQ759878    OAD62263.1    NWSH01006615    PCG63327.1    GEZM01042998    JAV79399.1    KP859401    AKZ17711.1    ADTU01007893    ADTU01007894    JTDY01008387    KOB64592.1    NNAY01000868    OXU26140.1    AY063500    AAL48299.1    KM016731    AID54883.1    KQ460479    KPJ14362.1    KP859403    AKZ17713.1    KQ971372    EFA10757.1    KM016732    AID54884.1    PZC75222.1    AK343220    BAM73902.1    KP058451    AKP80586.1    DQ355383    ABC84370.2    EFA10753.1    OWR47721.1    KQ435012    KZC13846.1    KQ414664    KOC65199.1    AK289284    BAM73811.1    ATLV01023783    KE525346    KFB49529.1    GL438658    EFN68668.1    AY345971    AAQ90477.1    NNAY01000058    OXU31426.1    KQ458981    KPJ04476.1    KQ976842    KYN07893.1    GFDL01001167    JAV33878.1    GGFJ01004457    MBW53598.1    KM217034    AIW79997.1    APCN01003852    EFA10754.1   
Pfam
PF00067   p450        + More
PF00001   7tm_1
Interpro
IPR036396   Cyt_P450_sf        + More
IPR002401   Cyt_P450_E_grp-I       
IPR001128   Cyt_P450       
IPR017972   Cyt_P450_CS       
IPR002403   Cyt_P450_E_grp-IV       
IPR000276   GPCR_Rhodpsn       
IPR017452   GPCR_Rhodpsn_7TM       
SUPFAM
SSF48264   SSF48264       
Gene 3D
PDB
6C94     E-value=4.81102e-74,     Score=708

Ontologies

Topology

Length:
505
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
26.3288799999999
Exp number, first 60 AAs:
25.95969
Total prob of N-in:
0.55446
POSSIBLE N-term signal
sequence
inside
1  -  1
TMhelix
2  -  19
outside
20  -  505
 
 

Population Genetic Test Statistics

Pi
219.920354
Theta
24.942642
Tajima's D
1.851091
CLR
0.391394
CSRT
0.862556872156392
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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