SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02813
Pre Gene Modal
BGIBMGA003511
Annotation
PREDICTED:_protein_flightless-1_homolog_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.624
 

Sequence

CDS
ATGTTGGTACTATATTGTGCAACAACATGTAGCAAAGGAATGACTGAAATCGAAGCTCTGGGAGCAAAACCAAATCACTGCACCTATGAATATGCCTACGACATGTACGGAGCTCACTGCGCCGATCTCAGACTCTCAAAAATACCGAGCCTTAGAAGTGGCATTGAGATCTTGGACTTCAGCGACAACAAGCTGCAAGAATTAACAGGAGATACGTTGTCAAGTTATACTAGTATAAAATTCTTGTATTTAGCAGATAATCAAATCTATCTCATAGAAGATGATGCGCTCAGTAATCCCCATCACTTTTCTAGCATGTGTAATCTAGGAAAAGTCGATATAACAGATTCTATAGACAATATTAAAATTTGTGATCTTAAGCCCACGATAATGTGGTTTCAAAATAAATCTGTTTACTTTGAGCTCGCAGATTATTCTAGGTTAAATTCTGGAGAATACGAATCGTGTCCTGTCTTAAATGGCACTCATATGAATATCAACAACGCAACATTCAATCTATGTAAAGCGGAACTACTACAGGTACAAAACATTAAAGCGGCACGGAAAACATGGCTTACTATCAGTGGCAGTCTTTTCGGATTCCTCGTCGGCTTCATATTGTTACTATACATAATGCATCGACACAATGTGGCGCAAACCAAGAAGCCGTCACCGGAAAAGCTTAAAGAGACAAAAAAACCCTCGGGCGATGCGGACAAACGTGCCACAGTTGTGCTGTTAGATAACATGTCATAG
Protein
MLVLYCATTCSKGMTEIEALGAKPNHCTYEYAYDMYGAHCADLRLSKIPSLRSGIEILDFSDNKLQELTGDTLSSYTSIKFLYLADNQIYLIEDDALSNPHHFSSMCNLGKVDITDSIDNIKICDLKPTIMWFQNKSVYFELADYSRLNSGEYESCPVLNGTHMNINNATFNLCKAELLQVQNIKAARKTWLTISGSLFGFLVGFILLLYIMHRHNVAQTKKPSPEKLKETKKPSGDADKRATVVLLDNMS

Summary

Pfam
PF13855   LRR_8
Interpro
IPR032675   LRR_dom_sf        + More
IPR001611   Leu-rich_rpt       
IPR003591   Leu-rich_rpt_typical-subtyp       
Gene 3D
PDB
5IJD     E-value=0.00275522,     Score=94

Ontologies

Topology

Length:
251
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.46053
Exp number, first 60 AAs:
0.00021
Total prob of N-in:
0.47669
outside
1  -  189
TMhelix
190  -  212
inside
213  -  251
 
 

Population Genetic Test Statistics

Pi
227.703707
Theta
189.091877
Tajima's D
1.50129
CLR
0.781672
CSRT
0.788560571971401
Interpretation
Uncertain
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