Gene

KWMTBOMO02812

Pre Gene Modal

BGIBMGA003686

Annotation

MSL2_protein_[Bombyx_mori]

Location

Bomo_Chr5(-):11864521-11868283      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.544

CDS

ATGAATGCAACAAGCCTTTACGTTTCTACGTGTCGACTCATAATATTAGCTGATCCCGCTGACAAATCTACGTGGACTGATTTATTTCGTTTGGTTCCGTATTTAAGACAATCTTTATCCTGTACGGTTTGCGGTAATTTACTAAAAGAACCATATACGCCAACAAGTTCTGGGTGCCAACATCACGTGTGTAAAAAGTGTAAAGGTGGTCGAAAAAAATTAAAACCTTCATGCAGTTGGTGTAAAGATTATGAAAATTATACTGAAAACTTACAGTTACGTATACTCCTTCAGTGTTACAAAAAGTTGTGCGAATATTTCATGGGAACAGAAGTGTACAAAACATTATTAGATGAAGATGAAGTTGCTGCCAGTGTGAATGGGGGTACAGTGGCCAGCTCAGGCTTAATAGATTTAATTCAGGAAGGTGCGGGATTTTCAGACGACTATAAAAGTACAGGAGGCCTTTCGAAGTCAGCATATAGCATATTACCATGTGTATACACAAATTCAGCATCAACACAAACCCAACATGGATCTAGTTCAAGTAGCTCGGGAGCAAGAAGTTCCAGAGATTCTCCCAATTCAAGATCAACAGCAAACGGATCTCCCATGTATTCTGTAATGTATGCTGGCTCTGGGAATAAAATCACAATCAAAAGAAAAGCAATGGATGAATTGGATTCACCCCAAAGTGAATCATCATCTAGGGAGAGTAAGTCACTCGGTTTCAAGAAACCATCAAATAGATCCCGTAATTCTACGGGCGGTAAGCGCAAAGGCTGCAGATGTGGAAATGCAACGGCAACACCGGGGAAACTTACTTGTTGCGGCCAAAGATGCCCCTGTTACGTTGACAGTAAACCTTGTACCGAGTGTAAGTGTAAAGGATGCAGAAATCCTCACAGGCCAGACGGGATGAAGGTCCGACCTCACATACCACAATTAGTGGACACACTGCAATTGACTCTAAACAACCCTGACAGCTCACCATCATGTTCAGGCTCAATGGACAGTTTGGATACTGATACCCTTACCATGGAGGCTATGGAGGAATCGCTTAGTTACACTGCAGAACTTAAATCGTCAAACATTAAAGTTTACACAAGTCAATTACAAGAGGTATCACCGTCGTTGCCAGCGACGATAATGATGGACGAGGACCTAGCTGAATCGCCGGACGATGATATGAGCTCCCCACATGACTACACCCTGGCATCTCCTCAGGGTTACGACGTGGACGTCATCTCACCGCAGTCAGCAGAGACTCAAGATGTCACCAGTGACATTGAGGTGGATTAG

Protein

MNATSLYVSTCRLIILADPADKSTWTDLFRLVPYLRQSLSCTVCGNLLKEPYTPTSSGCQHHVCKKCKGGRKKLKPSCSWCKDYENYTENLQLRILLQCYKKLCEYFMGTEVYKTLLDEDEVAASVNGGTVASSGLIDLIQEGAGFSDDYKSTGGLSKSAYSILPCVYTNSASTQTQHGSSSSSSGARSSRDSPNSRSTANGSPMYSVMYAGSGNKITIKRKAMDELDSPQSESSSRESKSLGFKKPSNRSRNSTGGKRKGCRCGNATATPGKLTCCGQRCPCYVDSKPCTECKCKGCRNPHRPDGMKVRPHIPQLVDTLQLTLNNPDSSPSCSGSMDSLDTDTLTMEAMEESLSYTAELKSSNIKVYTSQLQEVSPSLPATIMMDEDLAESPDDDMSSPHDYTLASPQGYDVDVISPQSAETQDVTSDIEVD

Uniprot

A5JPL8   A0A2W1BJG9   A0A2A4JUJ6   A0A2H1V2A6   A0A212F1U9   A0A194QT92   + More
A0A194PNC0   A0A067QWJ4   E2C5R7   A0A088AVX8   E9IUQ8   A0A310SVH7   F4WZP1   E2ACB4   A0A026X1C9   A0A3L8DRC8   K7IQY9   A0A2A3E2B1   A0A0L7QYB7   A0A195B7S1   A0A158NGT5   A0A195FFF8   A0A151XCW6   A0A195DXT7   A0A232F1V5   A0A1L8DSQ6   A0A154PR83   A0A1B0CDV0   D6W8B3   A0A1B6EQT1   A0A1Y1KNL2   A0A1B0DNJ8   A0A1B6HGY7   A0A1B6KIA3   A0A1Y1KIS3   A0A0N0BHC3   A0A1W4XSR9   U4UNZ9   N6U6C2   A0A1B6DHR8   A0A1B6CVS3   A0A1B6CPT4   E9HFH7   A0A0A9X2C0   A0A0P5LNR7   A0A0N7Z8H4   A0A2R7W4D1  

Pubmed

19121390    28756777    22118469    26354079    24845553    20798317    + More
21282665    21719571    24508170    30249741    20075255    21347285    28648823    18362917    19820115    28004739    23537049    21292972    25401762    26823975    27129103   

EMBL

BABH01007788    EF554691    ABQ51915.1    KZ150007    PZC75189.1    NWSH01000604    + More
PCG75368.1    ODYU01000355    SOQ34977.1    AGBW02010786    OWR47715.1    KQ461150    KPJ08743.1    KQ459597    KPI94931.1    KK852936    KDR13603.1    GL452801    EFN76701.1    GL766012    EFZ15691.1    KQ760118    OAD61923.1    GL888480    EGI60316.1    GL438491    EFN68904.1    KK107063    EZA61179.1    QOIP01000005    RLU22842.1    KZ288430    PBC25835.1    KQ414695    KOC63541.1    KQ976574    KYM80244.1    ADTU01015205    KQ981625    KYN39118.1    KQ982294    KYQ58205.1    KQ980107    KYN17688.1    NNAY01001282    OXU24500.1    GFDF01004680    JAV09404.1    KQ435073    KZC14402.1    AJWK01008274    KQ971307    EFA10926.2    GECZ01029511    JAS40258.1    GEZM01082840    JAV61255.1    AJVK01017614    GECU01033732    JAS73974.1    GEBQ01028796    JAT11181.1    GEZM01082841    JAV61254.1    KQ435757    KOX75848.1    KB632384    ERL94223.1    APGK01047053    KB741077    ENN74092.1    GEDC01012072    JAS25226.1    GEDC01019771    JAS17527.1    GEDC01021914    GEDC01017085    JAS15384.1    JAS20213.1    GL732636    EFX69504.1    GBHO01028727    GBRD01008581    GDHC01018525    JAG14877.1    JAG57240.1    JAQ00104.1    GDIQ01167281    JAK84444.1    GDKW01003339    JAI53256.1    KK854317    PTY14583.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000027135    + More
UP000008237    UP000005203    UP000007755    UP000000311    UP000053097    UP000279307    UP000002358    UP000242457    UP000053825    UP000078540    UP000005205    UP000078541    UP000075809    UP000078492    UP000215335    UP000076502    UP000092461    UP000007266    UP000092462    UP000053105    UP000192223    UP000030742    UP000019118    UP000000305   

PRIDE

A5JPL8   

Pfam

PF16682   MSL2-CXC        + More
PF16685   zf-RING_10

Interpro

IPR032043   Msl2_Znf-RING        + More
IPR013083   Znf_RING/FYVE/PHD       
IPR033467   Tesmin/TSO1-like_CXC       
IPR037922   MSL2       
IPR001841   Znf_RING       
IPR032049   Msl2-CXC       
IPR017907   Znf_RING_CS       

Gene 3D

3.30.40.10    

CDD

cd13122  MSL2_CXC

ProteinModelPortal

A5JPL8   A0A2W1BJG9   A0A2A4JUJ6   A0A2H1V2A6   A0A212F1U9   A0A194QT92   + More
A0A194PNC0   A0A067QWJ4   E2C5R7   A0A088AVX8   E9IUQ8   A0A310SVH7   F4WZP1   E2ACB4   A0A026X1C9   A0A3L8DRC8   K7IQY9   A0A2A3E2B1   A0A0L7QYB7   A0A195B7S1   A0A158NGT5   A0A195FFF8   A0A151XCW6   A0A195DXT7   A0A232F1V5   A0A1L8DSQ6   A0A154PR83   A0A1B0CDV0   D6W8B3   A0A1B6EQT1   A0A1Y1KNL2   A0A1B0DNJ8   A0A1B6HGY7   A0A1B6KIA3   A0A1Y1KIS3   A0A0N0BHC3   A0A1W4XSR9   U4UNZ9   N6U6C2   A0A1B6DHR8   A0A1B6CVS3   A0A1B6CPT4   E9HFH7   A0A0A9X2C0   A0A0P5LNR7   A0A0N7Z8H4   A0A2R7W4D1  

PDB

4B86     E-value=1.00015e-28,     Score=316

KEGG

100101214    K13164 male-specific lethal 2 | (RefSeq) MSL2; MSL2 protein

GO

GO:0072487   GO:0061630   GO:0016874   GO:0043984   GO:0016567   GO:0005515   GO:0008270   GO:0006260   GO:0003777   GO:0007018   GO:0030286   GO:0005216   GO:0045211   GO:0006281   GO:0048384  

PANTHER

PTHR16048  

Length:

433

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00214

Exp number, first 60 AAs:

0.00114

Total prob of N-in:

0.00757

outside

1  -  433

 

 

Pi

31.786815

Theta

23.552273

Tajima's D

1.219365

CLR

0.760252

CSRT

0.72256387180641

Interpretation

Uncertain