Silkworm Genome Informatics Database

Gene

KWMTBOMO02808 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003508

Annotation

PREDICTED:_gamete_and_mating-type_specific_protein_A-like_[Papilio_xuthus]

Location

Bomo_Chr5(+):11795688-11796604 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.354 Nuclear Reliability : 1.622

CDS

ATGAAGATCATTGGAATTGTTCTGTTATTAGTCTTTTACGGCAGTGAATGTCGCAAGATTTACAAGCCGATTGACAAAAATGCCAACATCGATTTCATTAATATGGAAGCTGGGGGAGCGAGGCCAGTAGGGAAGCCAACTGATAAGCCACTCGCAAAGCCGCCTGTTGTCCAGCCTGCTCCTACACCCGTGCCTCCAGCTCAGATCAAACCTGTCGTGACAGCTCTAACGCCTGTAGCTCCGAAGCCGGTTCATCCAACTCTACCACCCAACCAGATTAAGCCTGTGCCAGTGTACCCTACTCCAGCGACGCGGCTCATCACCACCCCAGGACCTGGAAGCGTGCAGCAGCTCGTCACTTTCTACAATAGCCAGGGCAAAGGAAGTGTAATCAAACCGTACAGTTACAGCGATGCCGTAAAGCAAGGTTAA

Protein

MKIIGIVLLLVFYGSECRKIYKPIDKNANIDFINMEAGGARPVGKPTDKPLAKPPVVQPAPTPVPPAQIKPVVTALTPVAPKPVHPTLPPNQIKPVPVYPTPATRLITTPGPGSVQQLVTFYNSQGKGSVIKPYSYSDAVKQG

Uniprot

H9J1X1 A0A194PNB5 A0A212EYU3 I4DRI4 A9NVX2 A0A194QT97 + More
A0A2A4JTM7 A0A2W1BNI7

Pubmed

19121390 26354079 22118469 22651552 18854048 28756777 + More

EMBL

BABH01007795 KQ459597 KPI94926.1 AGBW02011460 OWR46614.1 AK405131 + More
BAM20524.1 EF085478 ABK24783.1 KQ461150 KPJ08748.1 NWSH01000604 PCG75387.1 KZ150007 PZC75194.1

Proteomes

UP000005204 UP000053268 UP000007151 UP000053240 UP000218220

ProteinModelPortal

H9J1X1 A0A194PNB5 A0A212EYU3 I4DRI4 A9NVX2 A0A194QT97 + More
A0A2A4JTM7 A0A2W1BNI7

KEGG

101739838 no KO assigned | (RefSeq) proline-rich extensin-like protein EPR1

GO

SignalP

Position: 1 - 17, Likelihood: 0.988914

Length:

143

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01533

Exp number, first 60 AAs:

0.01512

Total prob of N-in:

0.03022

outside

1 - 143

Pi

34.898172

Theta

46.320872

Tajima's D

0.655563

CLR

0.166197

CSRT

0.55697215139243

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
25860555	GDRIEDTAPNTAFNTK	100.00	2e-07
24093152	NANIDFINMEAGGAR	100.00	2e-07
24402669	NANIDFINMEAGGAR	100.00	2e-07
27102218	IYKPIDK	100.00	2e-07
25860555	YTGVITVPDPAVPAR	100.00	4e-05
26280517	NAGHYVECIHTDGR	100.00	4e-05
24093152	NANESISGIGGNIAEAQK	100.00	4e-05
24402669	NAMSFAYK	100.00	4e-05
27102218	GSVIKPYSYSDAVK	100.00	4e-05
28467696	NAMSFAYK	100.00	4e-05
29197581	GSVIKPYSYSDAVK	100.00	4e-05
26822097	STSDTEIQTISEEIIR	100.00	0.005
25860555	TYEIQKEFEK	100.00	0.005
26280517	AFEIFQCYYK	100.00	0.005
24093152	GSSGDNSDDDQTDSAR	100.00	0.005
24402669	GSVGFGSGIHGWAFTIK	100.00	0.005
27102218	VYNAIITSNQNIEPSK	100.00	0.005
29197581	VSNPSYNGNFSEISTEFR	100.00	0.005

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics