SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02804
Annotation
PREDICTED:_protein-cysteine_N-palmitoyltransferase_HHAT-like_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.312
 

Sequence

CDS
ATGTCTGAAACACTGGCTATAAAAAGTTTGCCGACATTAGCTCTTTGTGGAGGTGGTTTATGGATGGGTTTAGTATTCCATTTAAAGTATGTCATATCATATGGCACAACAGGAGCTTTCGCCAGATTAGACAATATGGAACCACCACCAATTCCAAGATGTGTTGCAAGAATTCATGTCTATTCTCTCATGTGGAGATATTTTGATGTTGGATTATACCAGTTTTTATCCAAATATATCTACAAACCTGGTTACAGTGTCCTATCTAATTCACTAAAGCTTTCAAAGTTTGTAAATAAATTAATAGCATCATTAGCTACATTCATTTTCATATTTATGTGGCATGGAACTGTGTGGAACATATTTGTTTGGTCAAGTCTAAACTACATTGGCATTCTGCTAGAATATACTGGTAAAGCAGTATCAAGTACTGAGGGATACAAATGGTTCAGAACTAAAATTTTAAGAATTCACTAA
Protein
MSETLAIKSLPTLALCGGGLWMGLVFHLKYVISYGTTGAFARLDNMEPPPIPRCVARIHVYSLMWRYFDVGLYQFLSKYIYKPGYSVLSNSLKLSKFVNKLIASLATFIFIFMWHGTVWNIFVWSSLNYIGILLEYTGKAVSSTEGYKWFRTKILRIH

Summary

Similarity
Belongs to the membrane-bound acyltransferase family.
EMBL
KQ461150    KPJ08751.1    NWSH01000604    PCG75381.1    KQ459597    KPI94922.1    + More
ODYU01004977    SOQ45395.1    JTDY01003712    KOB69107.1    GEZM01054521    JAV73587.1    GEZM01054522    JAV73586.1    AJWK01007506    LJIJ01000098    ODN02707.1    GL446286    EFN88077.1    PYGN01000809    PSN40500.1    KK107167    EZA56379.1    KZ288444    PBC25672.1    KQ976892    KYN07238.1    GECZ01009624    JAS60145.1    ADTU01002902    GL888237    EGI64259.1    KK853018    KDR12454.1    GEBQ01000866    JAT39111.1    JH431265    KQ982316    KYQ57855.1    GEDC01014692    JAS22606.1    KQ971352    EFA07646.2    APGK01007092    APGK01029424    KB740734    KB737107    ENN79267.1    ENN83082.1    GECU01018322    JAS89384.1    KB630572    KB632025    ERL83691.1    ERL88104.1    UZAM01014583    VDP34745.1    GEDC01001242    JAS36056.1    KQ434870    KZC09562.1    GFXV01007436    MBW19241.1    NEVH01009412    PNF33093.1    KQ981215    KYN44500.1    CVRI01000048    CRK98783.1    UFQS01000653    UFQT01000653    SSX05797.1    SSX26156.1    KQ979074    KYN22798.1    JYDK01000044    KRX80188.1    JYDQ01000152    KRY12939.1    KRX80190.1    JYDI01000206    KRY48463.1    KRX80189.1    KRX80191.1    JI170854    ADY44813.1    JYDN01000209    KRX53227.1    KRY48464.1    JYDW01000024    KRZ60898.1    KRX53225.1    JYDJ01000037    KRX47863.1    KRY48462.1    KQ976565    KYM80551.1    UYYG01001169    VDN58532.1    DS235219    EEB13369.1    JYDO01000056    KRZ73983.1    JYDL01000116    KRX16048.1    KN732351    KIH59089.1    GBHO01039607    GBHO01006716    JAG03997.1    JAG36888.1    AXCM01000145    KRY48465.1    KRX53226.1    LVZM01003888    OUC47715.1    JYDT01000194    KRY81983.1    JYDS01000271    JYDV01000104    KRZ19667.1    KRZ33383.1    JYDR01000066    KRY70853.1    NNAY01002610    OXU20951.1    JPKZ01001763    KHN80137.1    UZAM01018082    VDP49456.1    JYDP01000043    KRZ12158.1    APCN01000281    AAAB01008859    EAA07632.5    AXCN02001459    JYDU01000065    KRX94866.1    UYSL01019850    VDL70604.1    ADMH02000418    ETN66593.1    KI669059    ETN69724.1    JH816425    EKC21090.1    LN609529    CEF66127.1    UZAH01028792    VDP02394.1    CP012525    ALC45065.1    HG805891    CDW54321.1   
Pfam
PF03062   MBOAT        + More
PF02985   HEAT
PF03435   Sacchrp_dh_NADP
PF03143   GTP_EFTU_D3
PF08938   HBS1_N
PF00009   GTP_EFTU
Interpro
IPR004299   MBOAT_fam        + More
IPR032981   HHAT       
IPR021133   HEAT_type_2       
IPR016024   ARM-type_fold       
IPR011989   ARM-like       
IPR000357   HEAT       
IPR005097   Sacchrp_dh_NADP       
IPR036291   NAD(P)-bd_dom_sf       
IPR009001   Transl_elong_EF1A/Init_IF2_C       
IPR015033   HBS1-like_N       
IPR000795   TF_GTP-bd_dom       
IPR037189   HBS1-like_N_sf       
IPR004160   Transl_elong_EFTu/EF1A_C       
IPR009000   Transl_B-barrel_sf       
IPR027417   P-loop_NTPase       
SUPFAM
SSF48371   SSF48371        + More
SSF51735   SSF51735       
SSF109732   SSF109732       
SSF52540   SSF52540       
SSF50465   SSF50465       
SSF50447   SSF50447       
Gene 3D

Ontologies

Topology

Length:
158
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
48.28961
Exp number, first 60 AAs:
22.29707
Total prob of N-in:
0.26677
POSSIBLE N-term signal
sequence
outside
1  -  9
TMhelix
10  -  32
inside
33  -  100
TMhelix
101  -  123
outside
124  -  158
 
 

Population Genetic Test Statistics

Pi
157.744833
Theta
163.03245
Tajima's D
-0.854745
CLR
102.481314
CSRT
0.167241637918104
Interpretation
Uncertain
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