Gene

KWMTBOMO02796

Pre Gene Modal

BGIBMGA013209

Annotation

Uncharacterized_protein_OBRU01_22750_[Operophtera_brumata]

Location

Bomo_Chr5(-):11357468-11359454      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.779

CDS

ATGTCTCCATATCGAGAAGGAATGAAGGCATTCGAAAAGGCGACAACACATTTAGATAAATCATGCAAAGTCCTGGAAGATGGTCAGTGTAGCATAATAGTCGATCAATTGATCCACGAATACAAAGAATTAACTTACTATAATGAGCTACTTATGAATCAACATTTGAATGAGCACTACAGACAGCGTCGTGGTTTTATCAACGGTGTCGGATATCTTGCTAACTCTCTGTTCGGAGTATTAGATGAACATTTCGCAGAAAAATACTCGCAAGACATAGAGCTCGTAAAACATAATGAACAGTACTTAGTGAGTTTATGGAAAAACCAAACTTCGATCGTCGAATCTGAATACAACTTACTAAAAAGAACAGAAGAATTCATGTCTAAGCAACATAAGACTATTAATAAACACATAACTAACCTAGAAAACATGTCAAATCGACTTCAACAGCAAGTAAACAACATATCGATTCTACAAGAATTTACCTTAATGTCCATTATTACAACTAATTTATTGCACAATTTGAAAGGGTCGCAAAATATATTGTTAGACATTTTAACTAACATACATCATGGTCAATTCAACATTCATTTACTTACTCCAGAACAACTTCAAAAGGAACTAAACATTATCACCGGATATTTACCGGAAGACACAATTCTTCCCGTAGAACCGCAGAATATTAAGAATTTGTATCCTCTGTTAAACATAAAGGCTCGTATTACTCTACAATATTTCTTATTCGAGATAACATTTCCACTCATTTATCAAGATCGATTCAAACTTTATAAAGTACATTCTATTCCTCATCAAAGCGGAAATATGACTATTGAAGTAGTTCCGGCATACGAATACATTGCTACCGACTTGAAAAGAGATTCCTTTCTTGAACTCACCACCGAAGAAGTCTTATCCTGTAATCAACAAGAAGAAGCTTACTACTGCAAGCTTAGAACGCCGATTCTTCATTTACGACCGGAGACTAAGTTTTGTAAGATTAAACTTAATAGCAACGTATGCAAATTAAAGTATTCTAATTGTGAAACCAAAATAATAGCACTAACTCATCCCTCTTTATATTTATATCACTGCTGTGGCACCTGCGAAGTAAAGGTCATGTGCGGAGAACATATTGCCTTGAAACAGTTGAATAACACTGGTCGTCTGTATCTAGAGCCAGGTTGCCTCATAAAGGGATCAGATTATACACTTCATATCCCTAAAACAAACAACAATAAGCTGGAGATTCAGTCTAACATTTACGTTCCAATAATAGATCCCATAAATAATATCATAAACAGCTCTCTTCTCAACACTGAGAACCTGAATGTCAGCGAGTCTAAAGATTTGCAGAACGCTCTCCAGAAACTACACGTGCGTATTGAAGATCTAGAAAACTCCCCGCCAGTATTGGAGACTTCATTAACATCTCACGATATTCATCAGTATGTGATAACATACATCATCGTCATCGTCATCGTGCTGGCCACCGGCGTGCTACTCTGGCGACGACGACGGTTGAGTGCGAACCGGGCGATCATCTCTGACGGCATCGAGCTTCAACAGTATAGTGAATGTGAAAATGTAAATAGTGCTAAGGCAGGGTTTAGTGCGCGACCTTCTGTGGTGGACCCTTCGCCTGGTGATGTGAACATTTATGCCAAAGTGTCAAACAAAGCGTGCTCTCCAATACCAAGAAAACCTATATGGACCCTAAGTTCTTAA

Protein

MSPYREGMKAFEKATTHLDKSCKVLEDGQCSIIVDQLIHEYKELTYYNELLMNQHLNEHYRQRRGFINGVGYLANSLFGVLDEHFAEKYSQDIELVKHNEQYLVSLWKNQTSIVESEYNLLKRTEEFMSKQHKTINKHITNLENMSNRLQQQVNNISILQEFTLMSIITTNLLHNLKGSQNILLDILTNIHHGQFNIHLLTPEQLQKELNIITGYLPEDTILPVEPQNIKNLYPLLNIKARITLQYFLFEITFPLIYQDRFKLYKVHSIPHQSGNMTIEVVPAYEYIATDLKRDSFLELTTEEVLSCNQQEEAYYCKLRTPILHLRPETKFCKIKLNSNVCKLKYSNCETKIIALTHPSLYLYHCCGTCEVKVMCGEHIALKQLNNTGRLYLEPGCLIKGSDYTLHIPKTNNNKLEIQSNIYVPIIDPINNIINSSLLNTENLNVSESKDLQNALQKLHVRIEDLENSPPVLETSLTSHDIHQYVITYIIVIVIVLATGVLLWRRRRLSANRAIISDGIELQQYSECENVNSAKAGFSARPSVVDPSPGDVNIYAKVSNKACSPIPRKPIWTLSS

Uniprot

A0A2W1BSY4   A0A2H1W5E1   A0A2A4JSD5   A0A0L7KQZ7   A0A0L7LML1   A0A2H1VPI7   + More
A0A2A4K6T9   A0A2H1W714   A0A2A4IWQ1   A0A0L7L980   A0A0L7L4W7   A0A2H1VXK6   A0A0L7LNT0   A0A2A4JFU8   A0A0L7LJ23   A0A2A4JE19   A0A2A4JZ49   A0A1I8M1E6   Q8I7Q1   A0A034W1W7   X1WPL6   K7JVF8   A0A0C9RC09  

Pubmed

28756777    26227816    25315136    25348373    20075255   

EMBL

KZ149978    PZC75870.1    ODYU01006135    SOQ47724.1    NWSH01000770    PCG74312.1    + More
JTDY01007142    KOB65434.1    JTDY01000529    KOB76793.1    ODYU01003679    SOQ42751.1    NWSH01000070    PCG79985.1    ODYU01006730    SOQ48837.1    NWSH01005848    PCG63896.1    JTDY01002190    KOB71914.1    JTDY01002935    KOB70460.1    ODYU01005059    SOQ45565.1    JTDY01000471    KOB77019.1    NWSH01001678    PCG70444.1    JTDY01000938    KOB75364.1    NWSH01001818    PCG70026.1    NWSH01000402    PCG76662.1    AY180917    AAN87269.1    GAKP01010822    JAC48130.1    ABLF02041281    AAZX01023296    GBYB01005785    JAG75552.1   

Proteomes

UP000218220    UP000037510    UP000095301    UP000007819    UP000002358   

PRIDE

Q8I7Q1   

Pfam

PF12259   Baculo_F        + More
PF18701   DUF5641
PF17921   Integrase_H2C2
PF00230   MIP
PF05585   DUF1758
PF03564   DUF1759
PF05380   Peptidase_A17
PF00665   rve
PF00096   zf-C2H2

Interpro

IPR022048   Envelope_fusion-like        + More
IPR041588   Integrase_H2C2       
IPR040676   DUF5641       
IPR001584   Integrase_cat-core       
IPR012337   RNaseH-like_sf       
IPR036397   RNaseH_sf       
IPR000425   MIP       
IPR008042   Retrotrans_Pao       
IPR023271   Aquaporin-like       
IPR008737   Peptidase_asp_put       
IPR005312   DUF1759       
IPR021109   Peptidase_aspartic_dom_sf       
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
IPR001995   Peptidase_A2_cat       

SUPFAM

SSF53098   SSF53098        + More
SSF81338   SSF81338       
SSF57667   SSF57667       

Gene 3D

3.30.420.10     1.20.1080.10     2.40.70.10    

ProteinModelPortal

A0A2W1BSY4   A0A2H1W5E1   A0A2A4JSD5   A0A0L7KQZ7   A0A0L7LML1   A0A2H1VPI7   + More
A0A2A4K6T9   A0A2H1W714   A0A2A4IWQ1   A0A0L7L980   A0A0L7L4W7   A0A2H1VXK6   A0A0L7LNT0   A0A2A4JFU8   A0A0L7LJ23   A0A2A4JE19   A0A2A4JZ49   A0A1I8M1E6   Q8I7Q1   A0A034W1W7   X1WPL6   K7JVF8   A0A0C9RC09  

KEGG

101735587    no KO assigned | (RefSeq) uncharacterized LOC101735587

GO

GO:0016021   GO:0015074   GO:0003676   GO:0015267   GO:0004190  

Length:

575

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

21.87672

Exp number, first 60 AAs:

2e-05

Total prob of N-in:

0.01548

outside

1  -  480

TMhelix

481  -  503

inside

504  -  575

 

 

Pi

249.716467

Theta

191.202089

Tajima's D

-1.365558

CLR

118.226262

CSRT

0.0754462276886156

Interpretation

Uncertain