SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02795
Pre Gene Modal
BGIBMGA003503
Annotation
PREDICTED:_agrin-like_[Amyelois_transitella]
Location in the cell
Extracellular   Reliability : 3.028
 

Sequence

CDS
ATGAACGGGCCGGGCTACGATTACTCCGTGCCTACCTCTACAGCATTCTACGCTACTAATAACCGCCCTCCGCAATACGATCGTGGCTACGGACAGATTAGTGTTGGTCCACTTTACAGTCCATCTTCGCATCCTCTTTCCAACTACGCCGATATTTATGAAGGCAATAATGACACTACACTTCGGGCCGAAGAAAGACATTGGTACATAGAAAACCATAAAAACTTACAACCCACATATAATATAAACCACGATACTATTACCCACGATGCCAAAAGCAAAAAAGAAGAAGAGAAGAAAACTGAAGTTCCTGTTAGATCAGAGACGTCTCAGGCGAGACAGAGAAGGAAAGAGGATCGATGTTCGTGCGAATGCTGGCCCACTACAGAAGTGAATGTGGCCCAAGAAAGTAATGGAAATGACGGAACTCGGTCGCTTTCTGGAGTCGATATTGTCGCCTCATATGGCGTTTATGGGAATCCTCACGATGAAGACAATTCGGGTTTTGCACGAATTACCGAGAAAAGTACAATTTACGGACAAGGCAGCGATGCCCCCGTTCAAGGTGTGATTGTGAATCAACAGGGAAATAGTGCCGTTGTGCGATCAGGTTCGGCAACGGAACCCACGTGTGGAAAGTGTTGTGTGTGGTCGTCGAACCCCCCAGCAGCTAATTCCGAAGATTATTGTTGGATGCATTACTGTCGGCCGGCGTTAATTATTTTACTGCTTCTGTTTTTTCTAGTTTTGTTAGGAGTTTCGACAGGGTTCCTACTGACAAACAATTATTTACATTATCAACCAAGACCACCGGCTCCGGAAGAAGCGTGTGAAAAAACTTTTTGCCGTTGGGGTGCCGAGTGTGTGTCCCTGGGGGACGGTCGAGCCCATTGCGCCTGTCCTACAACCTGTCCAACATCAACTGCCCCTGTATGCTCCACTGCAGGCCGGACGTATCGGAACCATTGCTACTTGCGAAAAGAGGCCTGTGAAAGGCGTCTCAACTTACGGATTAAACACGAAGGAGAATGTGAAGCAGGAGATCCGTGTACGAGCGTGACTTGCCCTACGGGGGCAAGGTGTGTCTCAACGTATGGGCAAGCTGAATGCAGGTGTCCTCGTAGTTGTCAAAGACGAAAACCTGTCTGTGGGACAGATGGCAAGGAGTATCTGTCCACATGTCATCTCGACAAGCATGCCTGCGACAATCAACTGAACGTGACTATCAAATACCATGGAAAATGCGATCCATGTTCGGAGCACGAATGCGCCGATGGAGGAGTTTGTCAGCTGAATGAAGTCAGGTCGCCGACCTGCCGATGCGGTCCATCTTGTGATTTAATCGTACGACCGGGCTCAGCTGTGTGTGGCTCCGATTACAAAGACTACCCCAGTGAATGCGCGTTACGAAGGGAGTCGTGCCGAACTAGACAACAGCTCACTATAGCGTACCGTGGAGAATGCGCTTCAGCACAACACCCGTGCGACTCTGTGAAGTGCGGTCTCCGAGAATTATGTACTCTGGATGCGCGCGGTGTTGCTGTGTGTGGATGCGGCGTGGAATGCGAGGCGATCGTCCGGCCAGTGTGCGGAACCGACGGACGGACGTATGACAGCCATTGCCATCTAGAGCGCGCCGCGTGCCTCGATAACCGAGATATCCGTGTTGCGTACGCGGGACCTTGTGGTTTGGAAAATCCGTGCGCTCGTGCGTCGTGTCCGTGGGGCGGCGGTTGTGTTGCGCGTCACGGCGCAGCGCAATGTGCGTGCCCGGTTTGTGACGCGACACTAGCGCCGGTGTGTGCGACAGATCATAATACTTACGGAAGCGAATGTAAAATGAGAATGCACGCATGTCAAGAAGGGATAAAGGAAGGGGAACTGCGTGTGCTCTACAACGGATCTTGTCAAACCTGCGCTGACGTCACGTGTCAAGGAGGCGGAGACTGTGTGGTGGATATTGAAACTGGACGCCCTACATGCCAATGTAATCACAACTGCACTGAAGCACAGGAATCGGACGTGGTATGCGGCTCGGATGGTCAAACATACCCCTCGCAATGCGAGTTGGACTCGACAGCGTGTCGAGAACAAAGTGATTTGCGGTTCGCCTACAAAGGAGATTGCGCGCTGTGCGATGGTGTACAATGTTCGTTTGGAGCATCATGTGCGGCGGGGGAATGTATTTGTCCAACCGACTGCACTGGATCGGCGCGTGAACCAGTTTGCGGCAGTTCTATGCAAACTTATCCCAACGAGTGTGAACTGCAGAAGGCGGCCTGCAGATTGCCTCCGCCAGGAACACTGCACGTCATATTTTATGGAGACTGCAAAGATCGCCTAGCCGTGGTGCCGCCAATAGCTATGACGACGACCGCGATGACCACGACCGAGGCGGAGGAAGGCTCCACGAACGTCGCGGCGACGGATGGGGGCGCGCCAGACTCGGCCGTGTGTCGCGACATAAGATGCGACTTCGGCGCCAGCTGCGAGGTCGGGGCTGATGGATATCCGCGTTGCTCCTGCCTCTTTGAGTGTCCGCATGACGATGAATACTTCCCGGTTTGCGCTTCGGATTTTAGGCTTTACACGAGCCTGTGTGCTATGCGCAAAGAGGGCTGTCAAAAGCAGCTCGAGCTGAGGTTGCGGCCGCTGGACCTTTGCAAAGGTATGGAAGTGAGGCCTTGCGGTAACAACAAAGCGATGTTGGATCCAACGACCGGTCTTGAAATTGACTGTGGAAACGGACCTCACCGTCAAGATTGCCCCGCCGGTAGCTACTGCCATATCACTTTGACCGCTGCGCGATGTTGTCCTAAAAACGATTCGAAGGTGGCGGATGAAAAAAAGTCGCATTGTTCGGAGAGTACGTATGGATGTTGTTCGGATGGTTCGACTCCAGCCACTGGTCCTCATGAGGAAGGTTGCGTCCCTAGCACGAGCTGTGGTTGCAACAGACTTGGGTCAGTTAGGGAGCAGTGCGACGAGAGCGGTCAGTGCTCGTGCCGGGCGGGCGTGGGCGGACTCAAGTGTGACCGCTGCGAACCCGGGTATTGGGGTCTGCCCAGGATCGGAACGGGACATGCCGGTTGTATACCGTGCGGCTGTTCGGCCTTTGGTTCGGTCAGAGAAGATTGCGAGCAAATGACGGGGCGATGTGTTTGTCGAACTGGAGTGCAAGGGCAAAAATGCACTGTTTGTGCCGACCACAGACGCAGACTTGGACCTAACGGATGCTCTGATCCGGAAACAGGAGGCGTAGCGTCATCTTGTTCGGAACTGTCGTGCTATTTCGGTGCGGTTTGTACTGAGCGTACAGGAGGAGCGCTCTGTGAATGCACAGCAGCACCCTGCCCCGACAGCGATATGAACATGCTGGTATGCGGCAGTGACGGCAAGACTTACGAGTCTGAATGCCATCTAAAGTTGCAAGCGTGCCGCACGCAAGAAGACATCGTGGTACAAGCGTTCGGTCCTTGCAAGCTAAATGAGCTGGCTGGTACAGCCGGCCCCCTCAGACCCTCATCTCCCATTCAATTCACGCAACAAGACGACGGAGCGGCATCCAAATCAACCAGACATCTGCTCAACCCAGATAAATATTACAATAAATACGATTGGACGAAGAAAGAAACATCCAGTGATTTCGACAGTATTTTGACGGGCCAGAAATTTAAAGGTTCGCAAACAGCAACGACGGCAACTGTCGGAGCGGTGGGCGCCCTGCTTGGTGACCTCTGCGCTGAGGACGCGGAGTGCTCAGCACTCGCTGGTGCATATTGCGCGCGCGGCGGCTGCGTGTGTAGACGTGGCTTCACACCCACACTGAACAGAAAGGCTTGTGTTGAGCAAATAACGCAAGAGACTACAGAGGAATACAGTGCTTGCCTATCAGAGCCTTGTTATAATCTCGGGACTTGTATCGATTTGCCAGGATCGACTTACACATGTCTGTGTGCCGGTCCTTACACCGGCAACAACTGCGAGAGTCTGGTCAAAGACGAACTATTGAATGCTTATATCGAAACTCCGTCTTTTGACGGCTCATCTTACATACGGCTAAAACCCTTGAAAGCTTATAACAAGTTGAACATCGATATTGAGTTTAAAGCGTTCTCCGAGAACGGGGTTATACTTTACAATCAACAAAAGGCAGACGGAACTGGTGATTTCGTTTCGCTTGCTTTGGTCAACGGATATTTAGAATTTAGGTACAACCTCGGTAACGGCGTTCTAGTTCTGACGTCCTTAGAAAAAATATCTATGAACGAGTATCACAAAGTATCTGCTAAAAGATATCATCGTGATGGTATATTGTCAGTTGATGATATGGAAGATGTTGTAGGGCAATCGATGGGACATTTGAAAGCTTTGGATCTCGCCGAGGATGCTTACGTCGGTTCTATACCTACCAATTATTCGAGGGTATTCGATAATATCGGTACGCGTAGCGGATTTCTCGGCTGCGTAAAGTACTTACGGATAATACGTCATCAAGTAACAAAAAAATTGGGCCGGCCCGACTCATTAGTGATCGCCATTGAAAACGTTCGGGAATGTCAATCGAATCCATGTATGAGTATTCCATGCACGAACGGAGGCACGTGTAAATCTATTGAAGGGTCGGTCACCGAATATACTTGTAGTTGTCCTATTGGATTCCAAGGAGCCAATTGTGATGAGAGATTAGATCCGTGCGAGTCAAATCCTTGTGGATATGATGAAGGGCTATTGTGTGATATTGGAAGCGACGGTGGCCATGTCTGCCGATGTTTATTTGGAGGTGAAATTGGCTCCAATGGAAATACTTGCAGCAATGACGTAACTGTAATTCAAGAAACGTGGTCTCCTCAATTCAACGGGACTAGCTACATTGAATTACCGCCACTCGAAGGCCTGGGCAAAGCGTTCAGAATAGAAATTTGGTTTTTAACGAACCGATTTTCCGGAATGCTCCTCTACACAGGGCAGTCTAATAAAGCCAAGGGGGATTTCATTGCGATTAACTTGGTTAATGGTTACTTACAATTTAGGTACAATTTGGGCAGCGGTATCGCAAATATAACGTCCCCGGTACCAATTACAAAAGGTCGTTGGCACCGAGCTCGAGTATCGCGCGCTGGTCGACACGGAAGTCTACAACTCGACCACCATCCGACCCAAAAAGGCCATTCATTACCACCACTGACACATTTAGAATTGACTTTACCGCTGTTTATAGGATCTTTGCCCGCTTACATCCGACCTCACAAAATGTCAGGAGTGACGAGCAGTTTTATTGGAGCCTTGCAACAGGTCTTTGTGAATGGTAATCCACTGACTCTGTATAGTGCTGATACGACTAAGTGCTCTATGATTCAAGACGAAGAACATTTGCCTTGCGCTACGACTGGCGTTACTAAATACACAGGACCACCTTGTGGAGATGGTCTAACTCCGTGCAAGAACAACGGTACATGCATCCCTTTGCTTAACGAATACAAATGTATTTGCCATGATGGTTATCAAGGAAGAAACTGTGAAATAGAAAAGGTTAACGTGGAAATGCTTAATGAAAGAAGCCCTGTAAATTTCGATGGCAATAATTACTTTTCCTACCGAAGTAGAACAAGTCGCAGCTTACGTACTAACAACGGACATTACGGTATTAGGAATAGCGGAGCTCGCGGTATTAGATACGAAATAAAATTTCGAACTTACAACGATTCGGGCCTTCTTATGTGGCGACGTAAAATAGGTGTTCGTCCCAGAGACTTTATAGGATTGGGTCTTAGCGATGGAAAGCTTCAGTTAATATATACAGATACAGATTCTAAGGATATGAATTCTGCTACCCACGAAGATTGGTTTCAGTCTCTAGAGTCCAAGAAAAGGGTTGATGATGGGAGGTGGCATACCGCGACGATACGGCGGAGGAAGAGACTGGCCATGCTTCAGGTTGACGACTTGCCACCGGTCAGAGGATACTCGCAATCATTGCTTGTGCCCTCGAAATCGAACCCCAAATTATGGATCGGGGGCTCACCGACATTGCCTCTGGGGTTGCCAGCCGCTCTATACAGTGGCCTCCGTGGTTGTGTAGCGAGTGTCAAAGGGAACGGACGACATATCGACCTAAATTCACCTATACGACCGACGACCGTCTTGCGACATTGTAATTGA
Protein
MNGPGYDYSVPTSTAFYATNNRPPQYDRGYGQISVGPLYSPSSHPLSNYADIYEGNNDTTLRAEERHWYIENHKNLQPTYNINHDTITHDAKSKKEEEKKTEVPVRSETSQARQRRKEDRCSCECWPTTEVNVAQESNGNDGTRSLSGVDIVASYGVYGNPHDEDNSGFARITEKSTIYGQGSDAPVQGVIVNQQGNSAVVRSGSATEPTCGKCCVWSSNPPAANSEDYCWMHYCRPALIILLLLFFLVLLGVSTGFLLTNNYLHYQPRPPAPEEACEKTFCRWGAECVSLGDGRAHCACPTTCPTSTAPVCSTAGRTYRNHCYLRKEACERRLNLRIKHEGECEAGDPCTSVTCPTGARCVSTYGQAECRCPRSCQRRKPVCGTDGKEYLSTCHLDKHACDNQLNVTIKYHGKCDPCSEHECADGGVCQLNEVRSPTCRCGPSCDLIVRPGSAVCGSDYKDYPSECALRRESCRTRQQLTIAYRGECASAQHPCDSVKCGLRELCTLDARGVAVCGCGVECEAIVRPVCGTDGRTYDSHCHLERAACLDNRDIRVAYAGPCGLENPCARASCPWGGGCVARHGAAQCACPVCDATLAPVCATDHNTYGSECKMRMHACQEGIKEGELRVLYNGSCQTCADVTCQGGGDCVVDIETGRPTCQCNHNCTEAQESDVVCGSDGQTYPSQCELDSTACREQSDLRFAYKGDCALCDGVQCSFGASCAAGECICPTDCTGSAREPVCGSSMQTYPNECELQKAACRLPPPGTLHVIFYGDCKDRLAVVPPIAMTTTAMTTTEAEEGSTNVAATDGGAPDSAVCRDIRCDFGASCEVGADGYPRCSCLFECPHDDEYFPVCASDFRLYTSLCAMRKEGCQKQLELRLRPLDLCKGMEVRPCGNNKAMLDPTTGLEIDCGNGPHRQDCPAGSYCHITLTAARCCPKNDSKVADEKKSHCSESTYGCCSDGSTPATGPHEEGCVPSTSCGCNRLGSVREQCDESGQCSCRAGVGGLKCDRCEPGYWGLPRIGTGHAGCIPCGCSAFGSVREDCEQMTGRCVCRTGVQGQKCTVCADHRRRLGPNGCSDPETGGVASSCSELSCYFGAVCTERTGGALCECTAAPCPDSDMNMLVCGSDGKTYESECHLKLQACRTQEDIVVQAFGPCKLNELAGTAGPLRPSSPIQFTQQDDGAASKSTRHLLNPDKYYNKYDWTKKETSSDFDSILTGQKFKGSQTATTATVGAVGALLGDLCAEDAECSALAGAYCARGGCVCRRGFTPTLNRKACVEQITQETTEEYSACLSEPCYNLGTCIDLPGSTYTCLCAGPYTGNNCESLVKDELLNAYIETPSFDGSSYIRLKPLKAYNKLNIDIEFKAFSENGVILYNQQKADGTGDFVSLALVNGYLEFRYNLGNGVLVLTSLEKISMNEYHKVSAKRYHRDGILSVDDMEDVVGQSMGHLKALDLAEDAYVGSIPTNYSRVFDNIGTRSGFLGCVKYLRIIRHQVTKKLGRPDSLVIAIENVRECQSNPCMSIPCTNGGTCKSIEGSVTEYTCSCPIGFQGANCDERLDPCESNPCGYDEGLLCDIGSDGGHVCRCLFGGEIGSNGNTCSNDVTVIQETWSPQFNGTSYIELPPLEGLGKAFRIEIWFLTNRFSGMLLYTGQSNKAKGDFIAINLVNGYLQFRYNLGSGIANITSPVPITKGRWHRARVSRAGRHGSLQLDHHPTQKGHSLPPLTHLELTLPLFIGSLPAYIRPHKMSGVTSSFIGALQQVFVNGNPLTLYSADTTKCSMIQDEEHLPCATTGVTKYTGPPCGDGLTPCKNNGTCIPLLNEYKCICHDGYQGRNCEIEKVNVEMLNERSPVNFDGNNYFSYRSRTSRSLRTNNGHYGIRNSGARGIRYEIKFRTYNDSGLLMWRRKIGVRPRDFIGLGLSDGKLQLIYTDTDSKDMNSATHEDWFQSLESKKRVDDGRWHTATIRRRKRLAMLQVDDLPPVRGYSQSLLVPSKSNPKLWIGGSPTLPLGLPAALYSGLRGCVASVKGNGRHIDLNSPIRPTTVLRHCN

Summary

EMBL
KZ149903    PZC78437.1    KQ459597    KPI94915.1    ODYU01003045    SOQ41330.1    + More
AGBW02014874    OWR40956.1    NWSH01001824    PCG69992.1    JTDY01000018    KOB79395.1    PCG69991.1    PCG69993.1    KQ971307    EFA11111.1    PYGN01000358    PSN47764.1    GEZM01090718    JAV57181.1    DS235830    EEB18046.1    ACPB03007594    PZQS01000002    PVD37045.1    KQ415816    KOG00302.1    KOG00301.1    GDIP01071977    GDIP01071976    JAM31739.1    GDIP01088924    GDIP01087821    GDIP01072876    JAM30839.1    GDIP01229907    JAI93494.1    GDIP01184659    GDIP01156574    JAJ38743.1    GDIP01183308    GDIP01181708    GDIP01111867    JAJ41694.1    GDIP01072877    JAM30838.1    GDIP01158567    JAJ64835.1    GDIP01071978    JAM31737.1    GDIP01039681    GDIP01038085    JAM65630.1    GDIP01124118    GDIP01070627    GDIP01052235    JAM51480.1    GDIP01202060    GDIP01179960    GDIP01179958    GDIP01179911    GDIP01168865    GDIP01154515    GDIP01153367    GDIP01044037    GDIP01044036    JAJ68887.1    GDIP01239908    GDIP01195414    GDIP01152169    JAJ27988.1    GDIP01215759    JAJ07643.1    GDIP01095975    JAM07740.1    GDIP01125266    GDIP01125265    JAL78449.1    GDIP01200816    GDIP01200815    GDIP01200813    JAJ22589.1    GDIQ01067687    JAN27050.1    GDIQ01196543    JAK55182.1    GDIP01200814    JAJ22588.1    GDIQ01049650    JAN45087.1    GDIP01195416    JAJ27986.1    GDIQ01029046    JAN65691.1    GDIP01195418    JAJ27984.1    GDIP01165864    JAJ57538.1    GDIQ01196540    JAK55185.1    JH817848    EKC34957.1    GDIP01235457    JAI87944.1    GDIQ01048192    JAN46545.1    GDIP01017858    JAM85857.1    GDIP01105769    JAL97945.1    GDIP01172009    JAJ51393.1    GDIP01120619    JAL83095.1    GDIP01124120    GDIP01124119    GDIP01122821    GDIP01118566    JAL80893.1    GDIQ01049647    GDIQ01048191    JAN45090.1    GDIQ01049648    JAN45089.1    GDIQ01067688    JAN27049.1    GDIQ01144160    JAL07566.1    GDIQ01064831    JAN29906.1    GDIP01038086    JAM65629.1    NEDP02000564    OWF55642.1    GDIP01086721    JAM16994.1    GDIQ01049649    JAN45088.1    GDIP01063778    JAM39937.1    GDIP01063733    JAM39982.1    GDIQ01235925    JAK15800.1    GDIQ01196541    JAK55184.1   
Pfam
PF07648   Kazal_2        + More
PF00054   Laminin_G_1
PF00053   Laminin_EGF
PF00008   EGF
PF02210   Laminin_G_2
PF00050   Kazal_1
PF01683   EB
PF03146   NtA
Interpro
IPR013320   ConA-like_dom_sf        + More
IPR036058   Kazal_dom_sf       
IPR003645   Fol_N       
IPR013032   EGF-like_CS       
IPR000742   EGF-like_dom       
IPR001791   Laminin_G       
IPR002049   Laminin_EGF       
IPR001881   EGF-like_Ca-bd_dom       
IPR003884   FacI_MAC       
IPR002350   Kazal_dom       
IPR009030   Growth_fac_rcpt_cys_sf       
IPR000633   Vinculin_CS       
IPR006149   EB_dom       
IPR008993   TIMP-like_OB-fold       
IPR004850   NtA_dom       
SUPFAM
SSF100895   SSF100895        + More
SSF49899   SSF49899       
SSF57184   SSF57184       
SSF50242   SSF50242       
PDB
2P6A     E-value=5.26069e-26,     Score=299

Ontologies

Topology

Length:
2053
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.60104
Exp number, first 60 AAs:
0.01328
Total prob of N-in:
0.99833
inside
1  -  237
TMhelix
238  -  260
outside
261  -  2053
 
 

Population Genetic Test Statistics

Pi
244.957428
Theta
198.246368
Tajima's D
0.768078
CLR
0.193599
CSRT
0.593220338983051
Interpretation
Possibly Positive selection
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