SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02793  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003694
Annotation
PREDICTED:_sulfotransferase_1C3-like_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 2.246
 

Sequence

CDS
ATGGCTTCTAATAGAAATTGTCCTGAAATACGAGAGAACGGCGAGGAAGAATCGACGGAGCTTCGGAGGCTTTTCAAAGGATTAGAAAACTGCCCTGGATTCGTTCGGGTCGGACCAGCCGGATATTTATTTTCGGTAGCATTTGAACCAGAAATCAAGAGTATATACAACATGGAAGTAAGAGCTACTGATATTTATGTCGCCACATTTCCGAGATCAGGGACAACGTGGACTCAAGAAATGGTCTGGTTACTATTGAATGACTTAGACTACGCCAAGGCGGCCTCACTTAATCTTGTCGACAGATACATAAATGTTGGAATCTCGATCTGGGGTCTAGCATCCAGAGCAAAAGGTGCCAAAATATTAAAATTTAAAGAAGAAGACAAGCGTAAATACAAACAAATAATAACGCCCGGTTGTGAGCTGCTAGCGGCAGCAAGTGACCCTCGCTTCATTAAAACCCATCTTCCAATGTGTATGCTGCCTCCTAATCTCATAGAAACAGCCAAAATAGTATACGTAGCAAGAGATCCACGAGACGTTGTAGTCTCACTGTATCATTTTTACCGTCTTATGCCTGTGCCGCAGTTTACAGGGGACTTCAAAACTTTTTGGAACATGTTCGTCCGCGATAACGTCATCAGAACACCTTATTTCGCACACATAAAAGAGGCATGGGAATTGAGAAATCATCCAAACATGCTATTCCTGTTCTACGAGGAACTTAAAAATGATCTTTCCAATACAATAAAACGCACTGCAAAATTCTTCAACAAAGAATACACAGATGAACAAATCTCAGTGCTGTGCAACCATCTTAATATAAATAATTTCAGACATAACGACTCAGTAAGCTTGAACTTCTTAGCAGATGTGTTTATACCAGGAGAAGAACCATTTATAAGAAAAGGAAAAGTTGGCGGCTGGCGAGATTACTTCGATGACGAGATGACCGTGGAATGCGAACAATGGATGGCCAAAAAACTGAAGGAAACTGGTATTCAGTTCCCGGTTTTCAGTAATGATGTAACCAAGAAATGA
Protein
MASNRNCPEIRENGEEESTELRRLFKGLENCPGFVRVGPAGYLFSVAFEPEIKSIYNMEVRATDIYVATFPRSGTTWTQEMVWLLLNDLDYAKAASLNLVDRYINVGISIWGLASRAKGAKILKFKEEDKRKYKQIITPGCELLAAASDPRFIKTHLPMCMLPPNLIETAKIVYVARDPRDVVVSLYHFYRLMPVPQFTGDFKTFWNMFVRDNVIRTPYFAHIKEAWELRNHPNMLFLFYEELKNDLSNTIKRTAKFFNKEYTDEQISVLCNHLNINNFRHNDSVSLNFLADVFIPGEEPFIRKGKVGGWRDYFDDEMTVECEQWMAKKLKETGIQFPVFSNDVTKK

Summary

EMBL
BABH01007897    AGBW02008382    OWR53534.1    BABH01008529    BABH01008530    BABH01008531    + More
NWSH01000001    PCG81090.1    ODYU01007908    SOQ51100.1    PCG81089.1    ODYU01007663    SOQ50640.1    ODYU01000444    SOQ35226.1    KQ461198    KPJ06273.1    ODYU01012890    SOQ59422.1    SOQ50641.1    KQ458793    KPJ05084.1    KQ460458    KPJ14654.1    LADJ01060126    KPJ21606.1    KPJ06272.1    KPJ21605.1    KPJ05083.1    KPJ05082.1    PCG81087.1    ODYU01005448    SOQ46321.1    KPJ05081.1    GL448783    EFN83859.1    EFN83857.1    KT000403    ANI86001.1    GEDC01013553    JAS23745.1    KPJ05079.1    AK401549    BAM18171.1    KPJ06275.1    AAZX01000018    OWR53535.1    U28654    AAC47136.1    DS235206    EEB13309.1    NNAY01000980    OXU25629.1    GL888030    EGI69148.1    OWR53536.1    PCG81091.1    KQ980849    KYN12229.1    KK853064    KDR11875.1    APCN01000869    OWR53533.1    BABH01015119    BABH01015120    AAAB01008987    EAA01764.4    ODYU01003446    SOQ42235.1    GECL01001637    JAP04487.1    KPJ05080.1    KQ978068    KYM97385.1    AB284983    BAF37537.1    KQ414905    KOC59625.1    ADTU01008904    ADTU01008905    KQ982907    KYQ49408.1    GFTR01005206    JAW11220.1    AXCN02001171    KQ435922    KOX68659.1    GL439579    EFN66998.1    ACPB03012364    DQ443407    ABF51496.1    GECL01002154    JAP03970.1    KZ288232    PBC31513.1    GFTR01005203    JAW11223.1    GBBI01001612    JAC17100.1    KQ460124    KPJ17660.1    GBGD01002073    JAC86816.1    GFTR01005205    JAW11221.1    KQ976714    KYM76939.1    GL732540    EFX82399.1    KPJ06271.1    GBGD01002074    JAC86815.1    ATLV01015189    KE525003    KFB40172.1    NWSH01000133    PCG79208.1    KQ981810    KYN35407.1    GBYB01015302    JAG85069.1    AK417030    BAN20245.1    GL762454    EFZ21395.1    JTDY01002690    KOB70912.1    GFDF01000367    JAV13717.1    GBHO01044077    GBRD01004179    GDHC01002349    JAF99526.1    JAG61642.1    JAQ16280.1    GFTR01005326    JAW11100.1    NEVH01000613    PNF43242.1    GBBI01001568    JAC17144.1    LRGB01000687    KZS16625.1    AXCM01017667    GDIP01068109    JAM35606.1    GDIQ01112393    JAL39333.1    GDIQ01223415    JAK28310.1    GDIQ01251659    JAK00066.1   
Pfam
PF00685   Sulfotransfer_1        + More
PF00096   zf-C2H2
Interpro
IPR000863   Sulfotransferase_dom        + More
IPR027417   P-loop_NTPase       
IPR012934   Znf_AD       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR002893   Znf_MYND       
IPR019734   TPR_repeat       
IPR011990   TPR-like_helical_dom_sf       
SUPFAM
SSF52540   SSF52540        + More
SSF57667   SSF57667       
SSF48452   SSF48452       
Gene 3D
PDB
1FML     E-value=7.40713e-71,     Score=678

Ontologies

Topology

Length:
347
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0784299999999997
Exp number, first 60 AAs:
0.04595
Total prob of N-in:
0.03946
outside
1  -  347
 
 

Population Genetic Test Statistics

Pi
215.53938
Theta
178.31918
Tajima's D
0.229916
CLR
0.275212
CSRT
0.43712814359282
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
27102218 INTIIR 100.00 1e-04
27102218 IKETGIQFPVFSNDVTK 100.00 4e-04
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