Gene

KWMTBOMO02784

Pre Gene Modal

BGIBMGA003699

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_CD2_antigen_cytoplasmic_tail-binding_protein_2_homolog_[Bombyx_mori]

Location

Bomo_Chr5(-):10752311-10754549      View in EpiBrowser

Full name

CD2 antigen cytoplasmic tail-binding protein 2 homolog      

Alternative Name

Protein hole-in-one

Location in the cell

Nuclear   Reliability : 4.343

CDS

ATGTCAAAGCGTCCCGCTTCCGAAGCATTAATAGACGAAGTAAAAAAGGCCACGAAGGATGGCAAGAAACATTCCTTGGATTCCGACGAAGAAGATAGTGGTGCTGAAGAAGAGAAGAATAATGTTATGAACTCCAATGATATTGAAGGTGAAGAGGAAGGAACTGGTGGAATGGAAGGTGAAATTACAATAACACCTTTTAACATGAAAGAAGAACTTGAAGAAGGGCATTTTGATACACAAGGACATTACCATTGGAAAAAAGAAAAAGAAATTCGTGATGGATGGCTTGATAACATTGACTGGGTTAAAGTAAAAGGTAGACCAGAGGATAAATATAAAATTCATCATAGCGATGAAAAAGGACTTGGTGATGAATCTAGTAGTGAAGATGAACAAGAACAACAATTTGATTTGATACATAACTATAAAGAAATATTACAACATATGAAACCTAAAGAAACAATTGCCAAAGCTTTACAGAGACTTGGTGCCACTTCTAAAATGTCTAGTGCAGAACGTTGGAAAAGAAAAAAAGCTGGCATTGTTGATGGAAACAGTCAAATTGTAACAAGAGTTACTGAACTTGCTAATCAAATCTTAACAAAAATGGGAAACATGGACATCTATCAGGAGTCCTATGAGAAAATAAGCAAACTATTAGATAAGAAGAAAAATAAGAATGATGATACTGAACTAGATATGTATGCAGATGATTTTGATCAGAAAGAACAACAAACTCTAGGAAATAAAAGTGATCAAAATGACACAAATAATACCCATGATGAAGCCTCTGAAAATGAGACACAAGAACTGAAATGGGAGTTCAAATGGAACCAAGATGATGACACTGAAGTATCAGGACCTCATTCTACTGAACAAATGAATAAATGGGCATCAGAAGGTCATTTTAAAACTGGAGTATGGGTACGGAAACATGGGGAAGACAGTCAATTCTATAGTTCAAACAGAATAGACTTTGAGTTGTATATGTAG

Protein

MSKRPASEALIDEVKKATKDGKKHSLDSDEEDSGAEEEKNNVMNSNDIEGEEEGTGGMEGEITITPFNMKEELEEGHFDTQGHYHWKKEKEIRDGWLDNIDWVKVKGRPEDKYKIHHSDEKGLGDESSSEDEQEQQFDLIHNYKEILQHMKPKETIAKALQRLGATSKMSSAERWKRKKAGIVDGNSQIVTRVTELANQILTKMGNMDIYQESYEKISKLLDKKKNKNDDTELDMYADDFDQKEQQTLGNKSDQNDTNNTHDEASENETQELKWEFKWNQDDDTEVSGPHSTEQMNKWASEGHFKTGVWVRKHGEDSQFYSSNRIDFELYM

Description

Required for embryonic epithelial tissue repair, but not for the assembly of the actomyosin cable at the wound edge. Probably acts downstream of rl in the regulation of Ddc and msn transcription to promote wound healing.

Keywords

Complete proteome   Developmental protein   Nucleus   Phosphoprotein   Reference proteome  

Feature

chain  CD2 antigen cytoplasmic tail-binding protein 2 homolog

Uniprot

A0A1E1WNB0   A0A2H1VR29   A0A194PUU3   A0A194QQ45   A0A2A4JY59   A0A212EHJ1   + More
A0A0L7LKA9   A0A0K8TMK0   A0A0N0BE43   A0A1B0GIR4   A0A088AQA9   A0A2A3EJL3   A0A0L7QYY7   A0A0T6ATY0   A0A1L8DCV2   K7IVR9   Q16P21   A0A023EQB9   A0A182G974   E2AZ32   D2A0R0   E2C622   A0A026WK01   B4KHR5   A0A0M5J1N5   A0A1Y1M1L0   A0A3L8DAH0   A0A2H8TVU4   A0A1W4WUN1   A0A2S2PJ70   A0A195C2S7   A0A067QUY2   A0A1B6GNW5   B3N9Q5   B4NZQ0   A0A151JMF0   A0A195BJL4   A0A158P3Z5   A0A1Q3F7I0   F4WKS1   B0WSN5   A0A1B6KEW2   B4HWP9   B4MUC4   B4LVC2   A0A1W4UFH8   J9K5E6   A0A3Q0JLX2   A0A151JZB5   A0A0P4VXK6   R4G7V4   B4JPZ9   A0A1Q3F6Q6   A0A1Q3F6Y7   A0A0A9XWT7   E0VSC1   A0A2J7PUB3   A0A2M4BRJ1   W5JJC4   A0A2M4BRI3   A0A182MFH2   A0A2M3Z8T2   A0A2M3Z8Q7   A0A3B0KDF5   Q9VKV5   A0A182WF89   A0A3B0JH56   A0A336LD50   A0A2M4ATB4   Q29P25   B4G773   B3MJI3   A0A2M4ASW7   A0A154PJD8   A0A182Q9A2   A0A182YJZ8   A0A182JJK7   A0A1B0AA37   A0A084WB94   B4Q9A6   A0A1B0F9A0   A0A182U808   Q7PMZ3   A0A182XC68   A0A2C9GQT3   A0A182VMH3   A0A182R8L9   A0A182MY20   A0A182LPE2   U4U7P4   N6UBF1   A0A1J1IH38   A0A182JXG0   A0A182PVC9   A0A1A9V1E7   A0A1A9YS01   A0A224XT92   A0A1B0C4T8   A0A1I8PHP3  

Pubmed

26354079    22118469    26227816    26369729    20075255    17510324    + More
24945155    26483478    20798317    18362917    19820115    24508170    17994087    28004739    30249741    24845553    17550304    21347285    21719571    27129103    25401762    26823975    20566863    20920257    23761445    10731132    12537572    12537569    18327897    19884309    22140578    15632085    25244985    24438588    22936249    12364791    14747013    17210077    20966253    23537049   

EMBL

GDQN01010773    GDQN01002582    JAT80281.1    JAT88472.1    ODYU01003919    SOQ43279.1    + More
KQ459597    KPI94905.1    KQ461181    KPJ07617.1    NWSH01000438    PCG76433.1    AGBW02014874    OWR40963.1    JTDY01000785    KOB75882.1    GDAI01002024    JAI15579.1    KQ435840    KOX71368.1    AJWK01015335    KZ288232    PBC31452.1    KQ414685    KOC63830.1    LJIG01022883    KRT78238.1    GFDF01009869    JAV04215.1    CH477799    CH477258    EAT36097.1    EAT45773.1    GAPW01002315    JAC11283.1    JXUM01153562    KQ571740    KXJ68124.1    GL444078    EFN61306.1    KQ971338    EFA01650.1    GL452895    EFN76627.1    KK107167    EZA56293.1    CH933807    EDW13352.1    CP012523    ALC39274.1    GEZM01044461    JAV78205.1    QOIP01000010    RLU17500.1    GFXV01006590    MBW18395.1    GGMR01016836    MBY29455.1    KQ978317    KYM95164.1    KK853235    KDR09559.1    GECZ01011163    GECZ01005658    JAS58606.1    JAS64111.1    CH954177    EDV58550.1    CM000157    EDW88834.1    KQ978949    KYN27376.1    KQ976453    KYM85363.1    ADTU01008647    GFDL01011521    JAV23524.1    GL888206    EGI65163.1    DS232074    EDS33989.1    GEBQ01029991    JAT09986.1    CH480818    EDW52444.1    CH963857    EDW76050.1    CH940649    EDW63301.1    ABLF02026148    KQ981427    KYN41759.1    GDKW01002273    JAI54322.1    ACPB03014206    ACPB03014207    GAHY01002067    JAA75443.1    CH916372    EDV98979.1    GFDL01011818    JAV23227.1    GFDL01011762    JAV23283.1    GBHO01021884    GBRD01003497    GDHC01010614    JAG21720.1    JAG62324.1    JAQ08015.1    DS235748    EEB16277.1    NEVH01021204    PNF19920.1    GGFJ01006555    MBW55696.1    ADMH02001328    ETN62995.1    GGFJ01006556    MBW55697.1    AXCM01000360    GGFM01004182    MBW24933.1    GGFM01004166    MBW24917.1    OUUW01000006    SPP81688.1    AE014134    AY069127    BT088782    SPP81687.1    UFQS01003375    UFQT01003375    SSX15580.1    SSX34943.1    GGFK01010631    MBW43952.1    CH379058    EAL34468.2    CH479180    EDW28327.1    CH902620    EDV32351.1    GGFK01010560    MBW43881.1    KQ434936    KZC11937.1    AXCN02001640    ATLV01022327    KE525331    KFB47488.1    CM000361    CM002910    EDX04548.1    KMY89547.1    CCAG010013973    AAAB01008966    EAA13008.5    APCN01001930    KB631763    ERL85965.1    APGK01035812    KB740928    ENN77981.1    CVRI01000048    CRK98860.1    GFTR01004766    JAW11660.1    JXJN01025653   

Proteomes

UP000053268    UP000053240    UP000218220    UP000007151    UP000037510    UP000053105    + More
UP000092461    UP000005203    UP000242457    UP000053825    UP000002358    UP000008820    UP000069940    UP000249989    UP000000311    UP000007266    UP000008237    UP000053097    UP000009192    UP000092553    UP000279307    UP000192223    UP000078542    UP000027135    UP000008711    UP000002282    UP000078492    UP000078540    UP000005205    UP000007755    UP000002320    UP000001292    UP000007798    UP000008792    UP000192221    UP000007819    UP000079169    UP000078541    UP000015103    UP000001070    UP000009046    UP000235965    UP000000673    UP000075883    UP000268350    UP000000803    UP000075920    UP000001819    UP000008744    UP000007801    UP000076502    UP000075886    UP000076408    UP000075880    UP000092445    UP000030765    UP000000304    UP000092444    UP000075902    UP000007062    UP000076407    UP000075840    UP000075903    UP000075900    UP000075884    UP000075882    UP000030742    UP000019118    UP000183832    UP000075881    UP000075885    UP000078200    UP000092443    UP000092460    UP000095300   

PRIDE

Q9VKV5   

Pfam

PF02213   GYF        + More
PF08449   UAA
PF08242   Methyltransf_12

Interpro

IPR039905   CD2BP2/Lin1        + More
IPR035445   GYF-like_dom_sf       
IPR003169   GYF       
IPR013657   UAA       
IPR026113   MeTrfase       
IPR029063   SAM-dependent_MTases       
IPR013217   Methyltransf_12       

SUPFAM

SSF55277   SSF55277        + More
SSF53335   SSF53335       

Gene 3D

3.30.1490.40    

CDD

cd00072  GYF

ProteinModelPortal

A0A1E1WNB0   A0A2H1VR29   A0A194PUU3   A0A194QQ45   A0A2A4JY59   A0A212EHJ1   + More
A0A0L7LKA9   A0A0K8TMK0   A0A0N0BE43   A0A1B0GIR4   A0A088AQA9   A0A2A3EJL3   A0A0L7QYY7   A0A0T6ATY0   A0A1L8DCV2   K7IVR9   Q16P21   A0A023EQB9   A0A182G974   E2AZ32   D2A0R0   E2C622   A0A026WK01   B4KHR5   A0A0M5J1N5   A0A1Y1M1L0   A0A3L8DAH0   A0A2H8TVU4   A0A1W4WUN1   A0A2S2PJ70   A0A195C2S7   A0A067QUY2   A0A1B6GNW5   B3N9Q5   B4NZQ0   A0A151JMF0   A0A195BJL4   A0A158P3Z5   A0A1Q3F7I0   F4WKS1   B0WSN5   A0A1B6KEW2   B4HWP9   B4MUC4   B4LVC2   A0A1W4UFH8   J9K5E6   A0A3Q0JLX2   A0A151JZB5   A0A0P4VXK6   R4G7V4   B4JPZ9   A0A1Q3F6Q6   A0A1Q3F6Y7   A0A0A9XWT7   E0VSC1   A0A2J7PUB3   A0A2M4BRJ1   W5JJC4   A0A2M4BRI3   A0A182MFH2   A0A2M3Z8T2   A0A2M3Z8Q7   A0A3B0KDF5   Q9VKV5   A0A182WF89   A0A3B0JH56   A0A336LD50   A0A2M4ATB4   Q29P25   B4G773   B3MJI3   A0A2M4ASW7   A0A154PJD8   A0A182Q9A2   A0A182YJZ8   A0A182JJK7   A0A1B0AA37   A0A084WB94   B4Q9A6   A0A1B0F9A0   A0A182U808   Q7PMZ3   A0A182XC68   A0A2C9GQT3   A0A182VMH3   A0A182R8L9   A0A182MY20   A0A182LPE2   U4U7P4   N6UBF1   A0A1J1IH38   A0A182JXG0   A0A182PVC9   A0A1A9V1E7   A0A1A9YS01   A0A224XT92   A0A1B0C4T8   A0A1I8PHP3  

PDB

4BWS     E-value=3.88891e-10,     Score=154

KEGG

101739365    K13099 CD2 antigen cytoplasmic tail-binding protein 2 | (RefSeq) CD2 antigen cytoplasmic tail-bindin

GO

GO:0005682   GO:0090303   GO:0042060   GO:0035220   GO:0022416   GO:0048749   GO:0005634   GO:0016021   GO:0055085   GO:0005515   GO:0008152   GO:0005789   GO:0006506   GO:0016740   GO:0004889   GO:0005216   GO:0045211   GO:0006281   GO:0048384  

PANTHER

PTHR13138   PTHR22809  

Subcellular location

Nucleus  

Length:

331

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01764

outside

1  -  331

 

 

Pi

207.330135

Theta

186.586451

Tajima's D

0.364887

CLR

0.101878

CSRT

0.470676466176691

Interpretation

Uncertain