Gene

KWMTBOMO02776

Pre Gene Modal

BGIBMGA003703

Annotation

PREDICTED:_cilia-_and_flagella-associated_protein_57_isoform_X2_[Amyelois_transitella]

Location

Bomo_Chr5(-):10629082-10639590      View in EpiBrowser

Full name

Cilia- and flagella-associated protein 57      

Alternative Name

WD repeat-containing protein 65

Location in the cell

Cytoplasmic   Reliability : 2.095 Nuclear   Reliability : 2.009

CDS

ATGGCCCTGAATTCGCCGCCGAATCTTTCGGCTCGTATATTTTATGGTCTCCGCACAGATATTCAATATAATGCGCACTATTTATCGGAATCTGAAATCATCTACCCTGCTGGGGGAGTAATCGTTATTCACGACCATCTACAAAAGAAACAAAAATTTATTCGATTACAAGACAAACATAAACCAATTAAATCTCTGGTACTGGCACCTAACAGGCGTTGGCTTGCGCTAAATGAAATTGCCGAAGAGGGTCAAAAACCTATTATTACCATCTATGACCTAACTACGTACAAGAGACGTAAGATCCTAACGGTTCCATTCGAGAATTCGACCGCAAGAGAATTCGCTTGCATCCAGTTCACGTTTGATTCTAAATACCTCGTGGCAATAACGGGAGAACCAGATTGGTGCTTGTATTATTACAATTGGGACAAAGGAAAAGTTGAAAGTCATGCTAAAGCTCAAAATCCAAGTGGGCAAGGGACCGTTGAAAGCGTGCAATGTAATCCATCAGACGCTACTTTGGTGGTGATCACGGGACCGTACACATTTCGTATCATGAATGTTTCTGAAACTGTCTGGCGCCAGTGGGGTTGGTGTAAAGCCGAGAATATCGCCATAACAAGTTGTATGTGGCTCACACCAGATCGAATCTTGTTCGGCACTGAGAATGGCGTCATCATGATGGTCGAAAATGGTGAACTACGCCAAAATTGCATATTTCGAGCAGCTGAAGTAACAGAATTTTCGTTGAAGAAAGTAGAGGCCGAGGCAGAGGAAGGCGACAAGACAAGCACTACGAGTAAACAAGATAGCACGAGTGATTCAACAGTCTCTTTAGATGAAAGCCAGCCAGTTACTTGTTTTGTAAACTTTGCGAAAGGCTTTGCATATGCTTGTGGCCCCGGCTACGTACACATGTTTGAGAAGGAAACTCCTCATCACTGGAGGAAAAGAAACTTATTTAGAATTTCGAGAAAGTCTTATAAACATACCCGAGAACACCCTGTATGGTCAAATTTGGATGCAATACAACACATCACTATCGATCCCAACCAAGAAACTCTGCTCATTACAACGTTGCGAAAACAGCTGTATCATGTTAAATTATTTGGACAACATATGCTTCAAAATCCGGAAATACCTTTCACAGAATTAGGTCCGTCGATGCATTACGGCCCTATAAATTCACTGTCGATGTGTGCTTGGAAGCCCATATTTATGACATCTGGGGAGCAAGATAAAAGCATCAGGATATGGAATTATATGACTGACGACGTGGAAATGATCAAATTGTACCAGGAAGAAATCCATTGCGTGTCTCTGCACCCGGCTGGTCTATTCGCAATCGTAGGATTTTCAGACAAGCTTCGTTTCATGGTTGTGCTGATTGATGATTTTGAAGTGATGCGGGAATTCCCCATACGTAATTGCAAACAAGCAAAATTTAGCACGAACGGTCACCTTTTTGCAGCAGTAAATGGCCAAGTGATCCAAGTTTTTTCCTCAGTTTCATTTCAAAATGTTTATAATTTAAAAGGACACAATGGGAGAATAACGTGTTTGGCTTGGTCAGCTAACGACTTGACTTTAGTATCTTGCGGCACGGAAGGCGCCGTTTACGAATGGAGTATGTCGTCTGGGCAAAGAGTCGGAGAAGTTATACTAAAAACGAATCAGTTTAAAGCATGTGCAGTGAATAGTATCGGAAAAACTACGTACGGTCTCGGAACTGATGGAGAAATAAAGGAAATCGGATCAAACACTATCAGACGGAATTTGGGTTTGATTGGATGTGCTCTTGATACGATCGTGTTATCGCGTTCCGATATGATGCTTTTTGTAACCGGTGGTGATGGAGGTGTAACGTCAGTGCAGTTGCCGCTCCTCGACAAGGCTGTTTTTAATGAGTTTCACATGCATAATAAAAAAGTAACTTGCATAGCTCTAGCTTACGACGATCAAACATTAGTTTCTGTAGCTGAAGACGCTTCCATTTGCTTATGGAGACTCACGAACGCTGATGGAAGAGCTATTGCCCTTGAGAAAGATTTCGCATACTCCAAGGAGATTCTTATTAGTAAAAAAGATCTTCAAGAAAAAATTAATAATATCAACTTGTTGAGTACAAGGATGAGCGAATTGGAAACGGAGCACACATATCAGCTTCGTCAAGCTGAAGCAACACAAGCCGAAAAACTGAAAGAAGTCCACGAAGGTTATTGCGCTGCAATAGAGGAATTAAAAGAAAAGAACGAGCTAATGGAAAGTGAACATACGCACGAAATAGGTATGATTCAACAAGATATTGCAAAATTGCGGTCTGGTCACGAGCGAACATTGCAGGCGCTCGAAGCGGATTTCAATGTCAGACTTATTAACGAGTACGACAGATACCAGAGTCTGGAAGACAAAACCGCCCGAATGCGAAAAGATTACGAAGAACGGCTCGAGGAATTAGCTGAAAGTAAGCTTCAAGCTCTTCGAGAAATTAATAATATGTTTGAAGCTAAACTCGAAGAAAAGGATTTACTCTTACAAGAGTTACAAGAACAAACAGACTTAGAAAGACGTGAACATGAAACAATAAAGGCGTCTATTGAAGAGGATGCTGATCGAGAAATTATTGAAATAAGAACGGCTTATGAAGTTCAATTGAAAGAGGAAAAGGACGCTAACGTTAGGTTAAAAGGTGAAACTGGACTTATGAAAAAGAAATTAATTAGTGCTAATAAAGAAATAGACGAGTTTAAGCATCAGGTTTCACAACTCAAAGCTGAACACAAACAGTTTCAAAAGGTAATATCAACATTGGAACGAGATGTGGCAGACTTGAAAAAAGAGATTTCAGAAAGAGATGGAACAATACAAGATAAAGAGAAACGAATATATGAATTGAAAAGGAAAAAGCAGGAATTAGAGAAGTACAAGTTTGTGCTTAATTTTAAAATAACCGAACTTAAAAATCAAATTGAGCCAAAAGAACGTATAATAAGTGAGCTTAAAGTTCAGATCGATGACATGGAAAACGAAGAATTAAAGCTGTTGAACGTTAAACATGAACTTGAGCTAAAAATCAGCCAGTTAAACGAAAAATTAGCATCGGCCAAAAAGGATTACTTAAATGAAGCCGACAGGAATGCAATGCTGAAGAACACATTAAAAAAAATAAAGATTGATTTGCATAATATGACGGCAAATTTTCAAGATCCAATGAAATTAAAAAGTAATGTGAAGACACTGTTTCACAAATACGTTGAAGACATCGATTTCGTACGCAGCCGTGTGGCAGAGGATGAAGCTATACGTGAATTCAACAGGCAGAGAGATCACCTTGAAAAACAGGTCACAGCTCTCAAACAACAATTAGCAAAGTCACTTGGTGGATCCAAGAGCGATATCGGAAAAATTATGGACGAAAACTGCACTCTACTGGCTGAGATCAATAGTCTAAGAACAGAGTTAAAATCGACTCGTTCTAGATGTTTTCAAATGGAGTCAATGCTTGGCTTGTCAGCGCGGTACATACCGCCAGCCACGGCTCGAGCTAAACTTAAGCATGTCACCGAAGATCGCGATAAACTTGATGAAGGCTTTAAGCAGAAAATTGAGGAAAGAGAAGAGATAATCATTGCTTTGAAAGAAGAGAATGAACGTCTATTAGGTAAAATACGATGTGTAGAAAATTCGGGGACAGCTACAGAAGATCCAGACGGGGCTAAAAATGAAATGTATTAA

Protein

MALNSPPNLSARIFYGLRTDIQYNAHYLSESEIIYPAGGVIVIHDHLQKKQKFIRLQDKHKPIKSLVLAPNRRWLALNEIAEEGQKPIITIYDLTTYKRRKILTVPFENSTAREFACIQFTFDSKYLVAITGEPDWCLYYYNWDKGKVESHAKAQNPSGQGTVESVQCNPSDATLVVITGPYTFRIMNVSETVWRQWGWCKAENIAITSCMWLTPDRILFGTENGVIMMVENGELRQNCIFRAAEVTEFSLKKVEAEAEEGDKTSTTSKQDSTSDSTVSLDESQPVTCFVNFAKGFAYACGPGYVHMFEKETPHHWRKRNLFRISRKSYKHTREHPVWSNLDAIQHITIDPNQETLLITTLRKQLYHVKLFGQHMLQNPEIPFTELGPSMHYGPINSLSMCAWKPIFMTSGEQDKSIRIWNYMTDDVEMIKLYQEEIHCVSLHPAGLFAIVGFSDKLRFMVVLIDDFEVMREFPIRNCKQAKFSTNGHLFAAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTNQFKACAVNSIGKTTYGLGTDGEIKEIGSNTIRRNLGLIGCALDTIVLSRSDMMLFVTGGDGGVTSVQLPLLDKAVFNEFHMHNKKVTCIALAYDDQTLVSVAEDASICLWRLTNADGRAIALEKDFAYSKEILISKKDLQEKINNINLLSTRMSELETEHTYQLRQAEATQAEKLKEVHEGYCAAIEELKEKNELMESEHTHEIGMIQQDIAKLRSGHERTLQALEADFNVRLINEYDRYQSLEDKTARMRKDYEERLEELAESKLQALREINNMFEAKLEEKDLLLQELQEQTDLERREHETIKASIEEDADREIIEIRTAYEVQLKEEKDANVRLKGETGLMKKKLISANKEIDEFKHQVSQLKAEHKQFQKVISTLERDVADLKKEISERDGTIQDKEKRIYELKRKKQELEKYKFVLNFKITELKNQIEPKERIISELKVQIDDMENEELKLLNVKHELELKISQLNEKLASAKKDYLNEADRNAMLKNTLKKIKIDLHNMTANFQDPMKLKSNVKTLFHKYVEDIDFVRSRVAEDEAIREFNRQRDHLEKQVTALKQQLAKSLGGSKSDIGKIMDENCTLLAEINSLRTELKSTRSRCFQMESMLGLSARYIPPATARAKLKHVTEDRDKLDEGFKQKIEEREEIIIALKEENERLLGKIRCVENSGTATEDPDGAKNEMY

Keywords

Alternative splicing   Coiled coil   Complete proteome   Polymorphism   Reference proteome   Repeat   WD repeat  

Feature

chain  Cilia- and flagella-associated protein 57
splice variant  In isoform 2.
sequence variant  In dbSNP:rs6663799.

Uniprot

H9J2G6   A0A212ETB2   A0A194QQ18   A0A2H1WLQ3   A0A194PUT3   A0A2A4JXX9   + More
A0A2J7R3M8   D6WVH5   E1ZVD5   E9IFJ3   A0A026W6V1   A0A151X9E4   A0A0J7N9G5   A0A195DRZ0   A0A195BG73   A0A158NC20   A0A195FD87   A0A1B6LPR0   A0A151IMB9   K7IQG5   E2BC92   A0A232F5D2   A0A0L7R1U0   A0A088A5V7   A0A2A3EIY3   F4X878   A0A0C9RK59   U4UED5   A0A1W5BM36   A0A2C9K1G6   A0A2T7NNI4   A0A210Q048   A0A1L8GM02   A0A0B7A6G0   A0A1S3IR34   W5MH95   W5MH82   N6TXR1   A0A1W4ZYJ0   A0A369SH58   W5QH30   K1QFI0   M3YQQ8   A0A2Y9J4E3   A0A3P8XHD0   A0A384CST8   H0Y248   A0A2Y9GJW5   A0A2U3VYR0   E2QWR4   H2ZKC6   A0A3P8ZJA3   A0A2Y9NPC6   A0A1U7TEK8   M3XAG8   A0A267F950   A0A1I8IX27   A0A267F1I4   A0A383YPH6   A0A1I8GKQ9   G1KNF2   F6TVM2   A0A1U7R9B0   A0A1S3WF92   A0A341BE64   A0A2K6FMT4   G3HFH7   G3TLA4   S7MT86   A0A1S3QXT4   A0A1S3QXT0   F6S6M6   A0A1S3F7J4   A0A2J8SME3   A0A2K6K3S6   A0A2K6NKI3   F7H742   A0A337SJ05   A0A2K5J6R0   A0A151MKT8   A0A369SH67   A0A0D9S7J7   A0A074ZBK4   A0A2Y9DCA2   H0VA87   A0A2Y9SS87   A0A2R9B388   H2PYU5   A0A1A6GXH0   Q96MR6   G1SN80   G3S7U2   A0A340Y7H8   V8PHE8   A0A2K5EK89   A0A3B4CKV7   A0A2K6K3V2   A0A2K6FMU8   F7GKM5  

Pubmed

19121390    22118469    26354079    18362917    19820115    20798317    + More
21282665    24508170    30249741    21347285    20075255    28648823    21719571    23537049    15562597    28812685    27762356    30042472    20809919    22992520    25069045    16341006    17975172    26392545    19892987    21804562    29704459    17495919    25362486    17431167    22293439    21993624    22722832    16136131    14702039    16710414    15489334    21574244    22398555    24297900   

EMBL

BABH01007930    AGBW02012631    OWR44691.1    KQ461181    KPJ07608.1    ODYU01009501    + More
SOQ53989.1    KQ459597    KPI94895.1    NWSH01000406    PCG76626.1    NEVH01007818    PNF35437.1    KQ971357    EFA08298.1    GL434492    EFN74845.1    GL762841    EFZ20654.1    KK107372    QOIP01000004    EZA51703.1    RLU23506.1    KQ982373    KYQ56991.1    LBMM01007908    KMQ89315.1    KQ980581    KYN15284.1    KQ976500    KYM83204.1    ADTU01011290    KQ981673    KYN38346.1    GEBQ01014226    JAT25751.1    KQ977059    KYN06041.1    GL447257    EFN86628.1    NNAY01000969    OXU25673.1    KQ414667    KOC64830.1    KZ288229    PBC31680.1    GL888932    EGI57209.1    GBYB01013667    GBYB01013672    JAG83434.1    JAG83439.1    KB632283    ERL91397.1    PZQS01000010    PVD22724.1    NEDP02005318    OWF42120.1    CM004472    OCT84882.1    HACG01028745    HACG01028746    CEK75610.1    CEK75611.1    AHAT01015953    APGK01057208    APGK01057209    APGK01057210    APGK01057211    APGK01057212    APGK01057213    APGK01057214    APGK01057215    APGK01057216    KB741278    ENN71062.1    NOWV01000010    RDD46258.1    AMGL01001101    AMGL01001102    AMGL01001103    JH816435    EKC35627.1    AEYP01007510    AEYP01007511    AEYP01007512    AAQR03170722    AAQR03170723    AAQR03170724    AAQR03170725    AAQR03170726    AAQR03170727    AAEX03009815    AAEX03009816    AANG04003279    NIVC01001296    PAA69734.1    NIVC01001472    PAA67586.1    JH000327    RAZU01000087    EGW08128.1    RLQ74201.1    KE162280    EPQ07674.1    NDHI03003559    PNJ21946.1    JSUE03001239    AKHW03005990    KYO25063.1    RDD46257.1    AQIB01144757    AQIB01144758    AQIB01144759    AQIB01144760    AQIB01144761    AQIB01144762    KL597039    KER20605.1    AAKN02053650    AJFE02040935    AJFE02040936    AJFE02040937    AJFE02040938    AJFE02040939    AACZ04033001    NBAG03000275    PNI52630.1    LZPO01066267    OBS70856.1    AK056562    AC093420    AL139138    BC117280    BC117306    AAGW02003011    AAGW02003012    AAGW02003013    AAGW02003014    CABD030002802    CABD030002803    CABD030002804    AZIM01000100    ETE73386.1   

Proteomes

UP000005204    UP000007151    UP000053240    UP000053268    UP000218220    UP000235965    + More
UP000007266    UP000000311    UP000053097    UP000279307    UP000075809    UP000036403    UP000078492    UP000078540    UP000005205    UP000078541    UP000078542    UP000002358    UP000008237    UP000215335    UP000053825    UP000005203    UP000242457    UP000007755    UP000030742    UP000076420    UP000245119    UP000242188    UP000186698    UP000085678    UP000018468    UP000019118    UP000192224    UP000253843    UP000002356    UP000005408    UP000000715    UP000248482    UP000265140    UP000261680    UP000005225    UP000248481    UP000245340    UP000002254    UP000007875    UP000248483    UP000189704    UP000011712    UP000215902    UP000095280    UP000261681    UP000001646    UP000002281    UP000189706    UP000079721    UP000252040    UP000233160    UP000001075    UP000273346    UP000007646    UP000087266    UP000002280    UP000081671    UP000233180    UP000233200    UP000006718    UP000233080    UP000050525    UP000029965    UP000248480    UP000005447    UP000248484    UP000240080    UP000002277    UP000092124    UP000005640    UP000001811    UP000001519    UP000265300    UP000233020    UP000261440    UP000008225   

PRIDE

H9J2G6    G3HFH7    Q96MR6   

Pfam

PF00400   WD40

Interpro

IPR001680   WD40_repeat        + More
IPR017986   WD40_repeat_dom       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR036322   WD40_repeat_dom_sf       
IPR019775   WD40_repeat_CS       

SUPFAM

SSF50998   SSF50998        + More
SSF50978   SSF50978       

Gene 3D

2.130.10.10    

ProteinModelPortal

H9J2G6   A0A212ETB2   A0A194QQ18   A0A2H1WLQ3   A0A194PUT3   A0A2A4JXX9   + More
A0A2J7R3M8   D6WVH5   E1ZVD5   E9IFJ3   A0A026W6V1   A0A151X9E4   A0A0J7N9G5   A0A195DRZ0   A0A195BG73   A0A158NC20   A0A195FD87   A0A1B6LPR0   A0A151IMB9   K7IQG5   E2BC92   A0A232F5D2   A0A0L7R1U0   A0A088A5V7   A0A2A3EIY3   F4X878   A0A0C9RK59   U4UED5   A0A1W5BM36   A0A2C9K1G6   A0A2T7NNI4   A0A210Q048   A0A1L8GM02   A0A0B7A6G0   A0A1S3IR34   W5MH95   W5MH82   N6TXR1   A0A1W4ZYJ0   A0A369SH58   W5QH30   K1QFI0   M3YQQ8   A0A2Y9J4E3   A0A3P8XHD0   A0A384CST8   H0Y248   A0A2Y9GJW5   A0A2U3VYR0   E2QWR4   H2ZKC6   A0A3P8ZJA3   A0A2Y9NPC6   A0A1U7TEK8   M3XAG8   A0A267F950   A0A1I8IX27   A0A267F1I4   A0A383YPH6   A0A1I8GKQ9   G1KNF2   F6TVM2   A0A1U7R9B0   A0A1S3WF92   A0A341BE64   A0A2K6FMT4   G3HFH7   G3TLA4   S7MT86   A0A1S3QXT4   A0A1S3QXT0   F6S6M6   A0A1S3F7J4   A0A2J8SME3   A0A2K6K3S6   A0A2K6NKI3   F7H742   A0A337SJ05   A0A2K5J6R0   A0A151MKT8   A0A369SH67   A0A0D9S7J7   A0A074ZBK4   A0A2Y9DCA2   H0VA87   A0A2Y9SS87   A0A2R9B388   H2PYU5   A0A1A6GXH0   Q96MR6   G1SN80   G3S7U2   A0A340Y7H8   V8PHE8   A0A2K5EK89   A0A3B4CKV7   A0A2K6K3V2   A0A2K6FMU8   F7GKM5  

PDB

1I84     E-value=1.61923e-06,     Score=129

KEGG

101742747    no KO assigned | (RefSeq) cilia- and flagella-associated protein 57

GO

GO:0031514   GO:0060285   GO:0005930   GO:0005515   GO:0005737   GO:0006629   GO:0016021   GO:0016627   GO:0004889   GO:0005216   GO:0045211   GO:0006281   GO:0048384  

Length:

1245

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02348

Exp number, first 60 AAs:

0.02033

Total prob of N-in:

0.00097

outside

1  -  1245

 

 

Pi

206.496218

Theta

174.069968

Tajima's D

-1.011158

CLR

24.01958

CSRT

0.134243287835608

Interpretation

Uncertain