Gene

KWMTBOMO02773

Pre Gene Modal

BGIBMGA003492

Annotation

PREDICTED:_F-box/LRR-repeat_protein_14-like_[Bombyx_mori]

Location

Bomo_Chr5(+):10603781-10606572      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.882

CDS

ATGGAACTTCCCTATGAGATTTTAGTGTATTTATTAAGATTTCTCCCAAAATCTGATCGAAAATCAGCGAGTGAAACATGTCGTTCGTGGTATATAGCAGCAAATGATCAACATTTTCTGAAAAACAAAGTAGTTATATTTTATAAATCAGTAATTAATGATGAAAACTCATCACCAATCCAAATATTTGAAAATTCTTTTACATCATACCATAACTTTTTTTTCAACGAAGTCGAATTATCAAGCAAGTTAAATGATTTTTGGATCAAAATAGGAGAAAACATAAAATGTTTATCTCTGACAAGCTGTGATGTAAATGAAAAGGTATTTGTTCATATTTTACAAAATTGTACTAATTTAAAAGAGCTGCACATTAAGAGTTGCAAAGAACTATTTATGTCTGGTCGATTGCTTGAAGGAAAAACAGAAGGTCTTTTAGTTACTAAACTTGAACATTTGAAATGTCTCAGCTTATCTGGAAATCAGTACTTAACTGATGCTTTATTTAATAGATTTATATCAGCATCTCCTGGATTAGAGGAACTTAATCTATCTGGATGTTCTCTACAATTTCATCTAGGTCTTGTCAAAAAGTTCTATCCAAATGGAACAGACATTTTTCAGAATCCATCAGAGAGTGTTTTAACTTTTCATTTTATTCATCAAATGATAATCTCCAGAGCTGACAAAATAAAACGACTGTTGTTTTCTAATACACTAATTGATGGTGCTGCTCTTAAAACTTTATCAGAGATAAAAAATCTTCAATTAGAATCACTGGAAGTGCATGCTTGTGATCAACTCACTAATACAGGCATTTTATCACTTACAAGCCACCAGATCTTCTTAAAGGAACTTGATATTGGACTGTGTACTAGAGTTACAGATCAGTCCCTTGTATATATTTGTAAAAATCTAGTCAACTTAGAAAACCTCAATATTCAAAGATGTCGAGCTGTGACTGATTTAGGTATTGCAGAGTTGGGTAAATTAATTAAATTAAAATCATTAAACATCTCTCGGTGCGAACTGTTGACTAAGGATGGATTATGTAAAGGTATATGTGCTGAAGTAAATGTGGTATTAGAAGATTTAGATATACATTCTCTAAATTTAGATCAAACAGGCCTCATAATGATCTCTGAAAAATTACCAAACTTACGTGCATTAGACTTGAGTTATTGTTTTAATGCAGTTACTGATACATCAATCCAAGTAATATTTAAGAATCAAGCATTTCTTAAAGTATTAAAAATTAGCCACTGTGATAAAGTCTCTGATGCTGGTTTAACTGGTATGGGGAAAATAGAAACTGAAACAAATGATGATGGACCGATAGAATCCAATTATAATACAGAACCAACATTACCAAGGATATATTTAGGATCCAGAGCCGAAGAAGAGATTGTTCGTGATGCCAAACGCAAGCGTGATGTAATGCGTATGTGTGAGAAGATATCAACAAATTCCTATACGGGCTATTCACTTGCAAGGCTCAAGGGTCTGCGTGATTTGGATTTGAGTGGATGCAACAGAATTACAGATGTTAGCCTTACTTATGCCTTTAATTTTAAAGAACTTATCAATTTGAACATTAGCAGATGTCAACAAATAACACACCAAGGTGTTGAGCATTTAGTTAAGAATTGTCAGAGTATTGAATATATCAATCTCAATGACTGCTATAACTTAAATGATCATGCTGTCAAAGAAATTGTTCAACAATTGAAAAGGTTAAAACAACTGGAATTAAGGGGATGCAATCAATTAACAGACAAGACACTGGAATATGTCCGATCTTATTGCGAGAAATTAAAATTTTTGGATGTACAAGGCTGCAGGAATATGTCACCAGAACTTGCTTGCTCTATTGGAAGTTTACCTACCCTCCACACTGTGTTGATGACCAAACCTGGACCATATGTAACAGATGATGTAAAGCAACGTTCGCCTGCACCAGCATTCCTTCCTGCCTTAATGAGAAAACTTCGTTTACACTAA

Protein

MELPYEILVYLLRFLPKSDRKSASETCRSWYIAANDQHFLKNKVVIFYKSVINDENSSPIQIFENSFTSYHNFFFNEVELSSKLNDFWIKIGENIKCLSLTSCDVNEKVFVHILQNCTNLKELHIKSCKELFMSGRLLEGKTEGLLVTKLEHLKCLSLSGNQYLTDALFNRFISASPGLEELNLSGCSLQFHLGLVKKFYPNGTDIFQNPSESVLTFHFIHQMIISRADKIKRLLFSNTLIDGAALKTLSEIKNLQLESLEVHACDQLTNTGILSLTSHQIFLKELDIGLCTRVTDQSLVYICKNLVNLENLNIQRCRAVTDLGIAELGKLIKLKSLNISRCELLTKDGLCKGICAEVNVVLEDLDIHSLNLDQTGLIMISEKLPNLRALDLSYCFNAVTDTSIQVIFKNQAFLKVLKISHCDKVSDAGLTGMGKIETETNDDGPIESNYNTEPTLPRIYLGSRAEEEIVRDAKRKRDVMRMCEKISTNSYTGYSLARLKGLRDLDLSGCNRITDVSLTYAFNFKELINLNISRCQQITHQGVEHLVKNCQSIEYINLNDCYNLNDHAVKEIVQQLKRLKQLELRGCNQLTDKTLEYVRSYCEKLKFLDVQGCRNMSPELACSIGSLPTLHTVLMTKPGPYVTDDVKQRSPAPAFLPALMRKLRLH

Uniprot

H9J1V5   A0A2H1WLY3   A0A2A4JY87   A0A194PNJ8   A0A2A4JX94   A0A194QRK0   + More
A0A1E1W7Q5   A0A0L7LDU3   A0A1E1WP54   A0A212ETB3   A0A067QMJ0   A0A1B6GGS5   A0A182GEP0   A0A1B6KZ31   A0A2J7PT45   A0A1Q3FK81   Q0IEJ5   A0A2A3ECU9   A0A0N0U6Q5   A0A154P7Y1   A0A088AM26   A0A0L7RHY2   B0WMK4   A0A2P8Y5G4   A0A1B6CRF7   A0A336KDX7   A0A1J1J2F0   A0A182QHX4   A0A336M0E8   A0A182WUD3   A0A182V0V6   A0A0E4GBG0   A0A182TWV0   A0A182HW42   A0A182NSX3   A0A182RD64   A0A182MTK7   A0A182KKT9   A0A182JYE3   A0A182YAV0   A0A182WDR9   A0A182P5C6   A0A084WLU5   A0A182SZW0   A0A182FTK9   W5JG98   A0A2M4AGU7   A0A182ILJ2   A0A2M4AH07   A0A2M4AGY4   A0A1I8PYR9   A0A0K8TLT6   A0A1A9W9U3   A0A0L0BSQ7   A0A067QKD9   B3MFE0   A0A1I8ME70   A0A3B0J5T7   A0A1A9VXJ0   B4MK52   W8C7V8   A0A0A1WSN2   A0A1B0A7F0   A0A1B0G1T5   A0A1W4UXD5   A0A1A9Y667   A0A034WUL1   B4HSA1   A0A0K8VKI9   Q7K0V7   A0A1B0BLM6   A0A0B4KEH1   B4JVD8   B4P3D0   B4GGJ3   B3N857   Q28Y47   A0A0P4VX65   B4QG95   A0A0K8TV16   B4LN93   B4KTR5   T1GNE4   A0A2M4AKF9   A0A2M4AKF4   A0A2M4BJ29   A0A2M4BJ44   A0A1W4WT00   A0A084WLU3   A0A0A1WKF8   E9G608   B0WW37   A0A1S4HDZ8   Q16NN3   A0A1S4FUY3   A0A182R028   A0A2R5LAG0   S7PZM5   A0A182MTJ2  

Pubmed

19121390    26354079    26227816    22118469    24845553    26483478    + More
17510324    29403074    12364791    20966253    25244985    24438588    20920257    23761445    26369729    26108605    17994087    25315136    24495485    25830018    25348373    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    15632085    22936249    21292972   

EMBL

BABH01007931    ODYU01009501    SOQ53986.1    NWSH01000406    PCG76638.1    KQ459597    + More
KPI94892.1    PCG76635.1    KQ461181    KPJ07605.1    GDQN01008077    JAT82977.1    JTDY01001546    KOB73575.1    GDQN01002357    JAT88697.1    AGBW02012631    OWR44694.1    KK853244    KDR09426.1    GECZ01008149    JAS61620.1    JXUM01011720    KQ560337    KXJ82977.1    GEBQ01023258    GEBQ01013810    JAT16719.1    JAT26167.1    NEVH01021921    PNF19510.1    GFDL01007131    JAV27914.1    CH477655    EAT37715.1    KZ288282    PBC29557.1    KQ435726    KOX78251.1    KQ434826    KZC07444.1    KQ414584    KOC70602.1    DS231998    EDS31075.1    PYGN01000905    PSN39498.1    GEDC01021515    JAS15783.1    UFQS01000223    UFQT01000223    SSX01615.1    SSX21995.1    CVRI01000067    CRL06520.1    AXCN02002134    UFQT01000218    SSX21897.1    AAAB01008816    HACL01000130    CFW94424.1    APCN01001462    AXCM01003024    ATLV01024291    KE525351    KFB51189.1    ADMH02001295    ETN63111.1    GGFK01006517    MBW39838.1    GGFK01006749    MBW40070.1    GGFK01006734    MBW40055.1    GDAI01002703    JAI14900.1    JRES01001421    KNC23051.1    KK853333    KDR08366.1    CH902619    EDV35614.2    OUUW01000001    SPP75203.1    CH963846    EDW72491.2    GAMC01007806    JAB98749.1    GBXI01012480    JAD01812.1    CCAG010006899    GAKP01000628    JAC58324.1    CH480816    EDW46996.1    GDHF01012918    JAI39396.1    AE013599    AY069552    AAF59035.1    AAL39697.1    JXJN01016484    AGB93345.1    CH916375    EDV98406.1    CM000157    EDW89403.2    CH479183    EDW35613.1    CH954177    EDV59470.2    CM000071    EAL26118.2    GDRN01106551    JAI57551.1    CM000362    CM002911    EDX06245.1    KMY92354.1    GDHF01034000    JAI18314.1    CH940648    EDW60097.2    CH933808    EDW09648.2    CAQQ02141887    CAQQ02141888    CAQQ02141889    CAQQ02141890    GGFK01007949    MBW41270.1    GGFK01007948    MBW41269.1    GGFJ01003935    MBW53076.1    GGFJ01003934    MBW53075.1    ATLV01024290    KFB51187.1    GBXI01015272    JAC99019.1    GL732533    EFX84856.1    DS232137    EDS35869.1    AAAB01008986    CH477816    EAT35952.1    AXCN02001087    GGLE01002309    MBY06435.1    KE163836    EPQ14042.1    AXCM01001233   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000037510    UP000007151    + More
UP000027135    UP000069940    UP000249989    UP000235965    UP000008820    UP000242457    UP000053105    UP000076502    UP000005203    UP000053825    UP000002320    UP000245037    UP000183832    UP000075886    UP000076407    UP000075903    UP000075902    UP000075840    UP000075884    UP000075900    UP000075883    UP000075882    UP000075881    UP000076408    UP000075920    UP000075885    UP000030765    UP000075901    UP000069272    UP000000673    UP000075880    UP000095300    UP000091820    UP000037069    UP000007801    UP000095301    UP000268350    UP000078200    UP000007798    UP000092445    UP000092444    UP000192221    UP000092443    UP000001292    UP000000803    UP000092460    UP000001070    UP000002282    UP000008744    UP000008711    UP000001819    UP000000304    UP000008792    UP000009192    UP000015102    UP000192223    UP000000305   

PRIDE

H9J1V5    Q7K0V7   

Pfam

PF00560   LRR_1        + More
PF13516   LRR_6
PF12937   F-box-like
PF00646   F-box
PF12799   LRR_4
PF02487   CLN3

Interpro

IPR032675   LRR_dom_sf        + More
IPR006553   Leu-rich_rpt_Cys-con_subtyp       
IPR001611   Leu-rich_rpt       
IPR001810   F-box_dom       
IPR036047   F-box-like_dom_sf       
IPR025875   Leu-rich_rpt_4       
IPR036259   MFS_trans_sf       
IPR003492   Battenin_disease_Cln3       

SUPFAM

SSF81383   SSF81383        + More
SSF103473   SSF103473       

Gene 3D

3.80.10.10    

ProteinModelPortal

H9J1V5   A0A2H1WLY3   A0A2A4JY87   A0A194PNJ8   A0A2A4JX94   A0A194QRK0   + More
A0A1E1W7Q5   A0A0L7LDU3   A0A1E1WP54   A0A212ETB3   A0A067QMJ0   A0A1B6GGS5   A0A182GEP0   A0A1B6KZ31   A0A2J7PT45   A0A1Q3FK81   Q0IEJ5   A0A2A3ECU9   A0A0N0U6Q5   A0A154P7Y1   A0A088AM26   A0A0L7RHY2   B0WMK4   A0A2P8Y5G4   A0A1B6CRF7   A0A336KDX7   A0A1J1J2F0   A0A182QHX4   A0A336M0E8   A0A182WUD3   A0A182V0V6   A0A0E4GBG0   A0A182TWV0   A0A182HW42   A0A182NSX3   A0A182RD64   A0A182MTK7   A0A182KKT9   A0A182JYE3   A0A182YAV0   A0A182WDR9   A0A182P5C6   A0A084WLU5   A0A182SZW0   A0A182FTK9   W5JG98   A0A2M4AGU7   A0A182ILJ2   A0A2M4AH07   A0A2M4AGY4   A0A1I8PYR9   A0A0K8TLT6   A0A1A9W9U3   A0A0L0BSQ7   A0A067QKD9   B3MFE0   A0A1I8ME70   A0A3B0J5T7   A0A1A9VXJ0   B4MK52   W8C7V8   A0A0A1WSN2   A0A1B0A7F0   A0A1B0G1T5   A0A1W4UXD5   A0A1A9Y667   A0A034WUL1   B4HSA1   A0A0K8VKI9   Q7K0V7   A0A1B0BLM6   A0A0B4KEH1   B4JVD8   B4P3D0   B4GGJ3   B3N857   Q28Y47   A0A0P4VX65   B4QG95   A0A0K8TV16   B4LN93   B4KTR5   T1GNE4   A0A2M4AKF9   A0A2M4AKF4   A0A2M4BJ29   A0A2M4BJ44   A0A1W4WT00   A0A084WLU3   A0A0A1WKF8   E9G608   B0WW37   A0A1S4HDZ8   Q16NN3   A0A1S4FUY3   A0A182R028   A0A2R5LAG0   S7PZM5   A0A182MTJ2  

PDB

4R5C     E-value=0.00245825,     Score=99

KEGG

101743040    K10275 F-box and leucine-rich repeat protein 9 | (RefSeq) F-box/LRR-repeat protein 14-like

GO

GO:0016021   GO:0016874   GO:0016567   GO:0019005   GO:0031146   GO:0006511   GO:0030513   GO:0000086   GO:0005515   GO:0003676   GO:0004190   GO:0006508   GO:0004889   GO:0005216   GO:0045211   GO:0006281   GO:0048384  

PANTHER

PTHR10981  

Length:

666

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00144

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00010

outside

1  -  666

 

 

Pi

282.340759

Theta

207.313187

Tajima's D

0.941676

CLR

27.4132

CSRT

0.637818109094545

Interpretation

Uncertain