Gene

KWMTBOMO02772

Pre Gene Modal

BGIBMGA003705

Annotation

PREDICTED:_zinc_finger_protein_521_[Bombyx_mori]

Location

Bomo_Chr5(-):10510741-10523740      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 2.82

CDS

ATGCCGTTTCGTTGTGAATTCTGCGCACGACTATTCAAACACAAGAGATCGCGCGACCGACATGTTAAGCTGCACACTGGTGATCGGAAGTATCGATGTGCACATTGCGAATCAGCTTTCTCGAGGAGTGATCATTTGAAAATCCACATGAAGACTCATGACAATCAAAAGCCGTTTCAATGCACGATTTGCAACCGCGGCTACAACACGGCTGCAGCGCTCACTTCTCACATGCAGGGACACAAGCGAGACCGGGAGGGTCGTGAACAAGATCGCCGACGCCCACTTCGCTGCCCACGTTGTGGTGATGCATTTCGCCGACCTGATCTACTTCAGGGACATATGACGACAGCACATGGGATCGATGCAGCGGTAATGACGCCACCGCGCCGTGTTGCATCTCAACCACCCCCTACACTTCTGGCTTGCATTTACTGTACTCGGGACACTTTCACGAGCATGGAACAGTTACAGTTACACGTACGCGCAGCTCATTCGGCCTTACTCAACGGTGACCTTACGGGACACACAATCGATCAACCTGCACCGACAGATCTAAGTAGACGAGGACCGGAAGACGCGCCACCACTGAAGCGGCGTCGATCAGGTTCTGGAACACCACAAACCACTTTATCGCCGAGTACTTTACTTTGCAATCAATGCGATGCCGCACTACCAGATTTTGAAGCATTTCGCGCTCATCTGAAAGGACATTTAGAAGAGGGCGGGGAACTGACTCGCTCTAGTCCCGCTCCGTGTTTGCAATGTGGCTCGACTTACGCGGATGCAGCCGCTTCAGAGCGGTACCTAACCGCTCATTACTTAGCAGTTTCTTGTGAATATACTTGTCACAGTTGCGCTCGGAGTTTTTCCACACCCGATGACCTCCAGAAGCACCTTCTAGATCTTCACGCTCACCATTTATACCGTTGTTCTCTATGCAAAGAAATATTCGATTCAAAAGTAGCGATACAGGTCCATTTCGCTGTGGCCCACAGCGGTGAGAATAAAATATGGATGTGCCGTTCGTGCGGCGGGAGTGGAGGAGCTCTGCGTTCGGAAGCGGAGGGAGTAGCGCACGTGCGGGCCCGACATGGCGCCGGTGTGTCGCGGTGCACGTGCGGCGCGCTGCAGGCCGGGCCCCGTCCTGTGCGTCCGCCGCGACCTTACCGTTGTCCGGTGCCCGCCTGCACCGAAAACTTCGCCGTGCAATATCTGTTAGAGCGACACATGCAAGCGCACCATGCTTTGCCGCATCAAGTTTTAAACGGTGAATTGAGTAGAGCCAAGCCTCTAGAAAATAATAACGGAACTGAGGGAATTGAGAATGAACGTTCACCGTGCACGCCTACCCCTGAAGCTGCTGGTGCAAGCTGTCCCATAAATAATGAAGATAGACGCCGTAAAAATGGAGCAGTTGCTCTGCAATGTGCTTATTGTGGCGAAAGGACTAGAAGTCGAGCAGAGTTAGAAGCTCATACCCGGGCCCATTCGGGCGCGGCCGCTGCGCGACATAAATGTTTAATTTGTGATGAAGTTTTGCCTTCAGCGGCCGTCCTTGCAGAACACAAGCTCACACATTGCAAGGTCGTTGCAGGAGACACGTGCTCCCGGTGTCGCGCACGGCTTCCATCTGAAGAGTCGTTTTTGACACACATGGCACGACACCACCCGGCTCTACCGGCGCCATGCGTCGTGTGTCGACAGACTCTAGCTTCCGAGGCCGAGGCCCGTCTCCATGCTCGTTTCCATTTACGCCCCAGTGAGGACGAACAACGATGTGCAATATGTCTTCGAGCTCTCCCAGAAAACGAAGCAGGCGAAGGAGCGCGCGCTTGTTCCTCGTGCTACGCTCGCCACACCGCTCCTAGACCTCCACCGCCAGCCGACCACGATTGCCGACTATGCCGCCGAGCTCTTGGGTCACCTACCCGTTTACAAGCACATCTAATCGAGCACACGTTTGCTGGAATCGGTGCATTTACATGCTATTTGTGCTCGGCTGTTTTCACAAGCGCTGCTGGCCTGCAGCGACATTTGCCAGAACATTCGGCTGCACCCAGGCCATACGATTGTGGGAGATGTGGGTTGAAATTTTTCTTCCGAGCAGAATTAGATAATCACGCATTCGTTCATATTGAAGAAGCAGAAATAGCACAAAGAGCTTTTTACGAGGCTTATGCACGGGAAGCTGCATCGGCTTGGGCGGCGCTCGCTCCTCCAGAGCCACAGCAGGCGGCAACGCCAGCGCCTGCTGTGGTTGAAATGAAACGAGAACCAGAAATCAAGGAAGAGCGTCATGATGAGTACATCGAAGTGTCGTCTCCTGTTCCTCCTACACCACAAGCCCCTGCTGCGACTGCGACTCCTCCGCCGATTGTAAAGCAGGAAAAACCCGATGAAGACTAA

Protein

MPFRCEFCARLFKHKRSRDRHVKLHTGDRKYRCAHCESAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQGHKRDREGREQDRRRPLRCPRCGDAFRRPDLLQGHMTTAHGIDAAVMTPPRRVASQPPPTLLACIYCTRDTFTSMEQLQLHVRAAHSALLNGDLTGHTIDQPAPTDLSRRGPEDAPPLKRRRSGSGTPQTTLSPSTLLCNQCDAALPDFEAFRAHLKGHLEEGGELTRSSPAPCLQCGSTYADAAASERYLTAHYLAVSCEYTCHSCARSFSTPDDLQKHLLDLHAHHLYRCSLCKEIFDSKVAIQVHFAVAHSGENKIWMCRSCGGSGGALRSEAEGVAHVRARHGAGVSRCTCGALQAGPRPVRPPRPYRCPVPACTENFAVQYLLERHMQAHHALPHQVLNGELSRAKPLENNNGTEGIENERSPCTPTPEAAGASCPINNEDRRRKNGAVALQCAYCGERTRSRAELEAHTRAHSGAAAARHKCLICDEVLPSAAVLAEHKLTHCKVVAGDTCSRCRARLPSEESFLTHMARHHPALPAPCVVCRQTLASEAEARLHARFHLRPSEDEQRCAICLRALPENEAGEGARACSSCYARHTAPRPPPPADHDCRLCRRALGSPTRLQAHLIEHTFAGIGAFTCYLCSAVFTSAAGLQRHLPEHSAAPRPYDCGRCGLKFFFRAELDNHAFVHIEEAEIAQRAFYEAYAREAASAWAALAPPEPQQAATPAPAVVEMKREPEIKEERHDEYIEVSSPVPPTPQAPAATATPPPIVKQEKPDED

Uniprot

A0A2H1WA26   A0A2A4JYR4   A0A212ET90   A0A194PN81   H9J2G8   A0A0L7LSL0   + More
A0A139WPR6   A0A139WPR2   D6W676   A0A1B6DQJ5   A0A224Z059   A0A0C9REE1   A0A087UPX5   A0A2P8Y5G3   A0A1V9X715   A0A0P5GMJ0   A0A2P2I3E4   A0A1Y1MER6   A0A0P4XFM4   A0A151PH54   A0A151PHA9   A0A1Y1M9Z7   A0A2H8TIM5   A0A2A3EBB6   A0A2S2R7U3   A0A088ARC3   A0A0L7RCR4   S7NGS2   H3AWS4   H3AWS3   C3ZBC4  

Pubmed

22118469    26354079    19121390    26227816    18362917    19820115    + More
28797301    29403074    28327890    28004739    22293439    9215903    18563158   

EMBL

ODYU01007289    SOQ49939.1    NWSH01000406    PCG76633.1    AGBW02012631    OWR44697.1    + More
KQ459597    KPI94891.1    BABH01007936    JTDY01000170    KOB78463.1    KQ971306    KYB29906.1    KYB29907.1    EFA11085.2    GEDC01009425    JAS27873.1    GFPF01008458    MAA19604.1    GBYB01005316    JAG75083.1    KK120933    KFM79414.1    PYGN01000905    PSN39500.1    MNPL01021287    OQR69385.1    GDIQ01238272    JAK13453.1    IACF01002913    LAB68548.1    GEZM01037970    JAV81817.1    GDIP01243806    JAI79595.1    AKHW03000230    KYO48282.1    KYO48284.1    GEZM01037969    JAV81818.1    GFXV01001737    MBW13542.1    KZ288308    PBC28754.1    GGMS01016876    MBY86079.1    KQ414615    KOC68589.1    KE164262    EPQ16471.1    AFYH01073026    AFYH01073027    AFYH01073028    AFYH01073029    AFYH01073030    AFYH01073031    AFYH01073032    AFYH01073033    AFYH01073034    AFYH01073035    GG666603    EEN50161.1   

Proteomes

UP000218220    UP000007151    UP000053268    UP000005204    UP000037510    UP000007266    + More
UP000054359    UP000245037    UP000192247    UP000050525    UP000242457    UP000005203    UP000053825    UP000008672    UP000001554   

PRIDE

H9J2G8   

Pfam

PF00096   zf-C2H2        + More
PF00386   C1q

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type       
IPR036280   Multihaem_cyt_sf       
IPR001073   C1q_dom       
IPR008983   Tumour_necrosis_fac-like_dom       

SUPFAM

SSF57667   SSF57667        + More
SSF48695   SSF48695       
SSF49842   SSF49842       

Gene 3D

2.60.120.40    

ProteinModelPortal

A0A2H1WA26   A0A2A4JYR4   A0A212ET90   A0A194PN81   H9J2G8   A0A0L7LSL0   + More
A0A139WPR6   A0A139WPR2   D6W676   A0A1B6DQJ5   A0A224Z059   A0A0C9REE1   A0A087UPX5   A0A2P8Y5G3   A0A1V9X715   A0A0P5GMJ0   A0A2P2I3E4   A0A1Y1MER6   A0A0P4XFM4   A0A151PH54   A0A151PHA9   A0A1Y1M9Z7   A0A2H8TIM5   A0A2A3EBB6   A0A2S2R7U3   A0A088ARC3   A0A0L7RCR4   S7NGS2   H3AWS4   H3AWS3   C3ZBC4  

PDB

2I13     E-value=2.98001e-12,     Score=177

KEGG

101739648    no KO assigned | (RefSeq) zinc finger protein 521

GO

GO:0003676   GO:0005634   GO:0003677   GO:0046872   GO:0004190   GO:0006508   GO:0016021   GO:0004889   GO:0005216   GO:0045211   GO:0006281   GO:0048384  

Length:

802

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.75078

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00033

outside

1  -  802

 

 

Pi

338.495153

Theta

239.428943

Tajima's D

1.438772

CLR

0.220262

CSRT

0.776011199440028

Interpretation

Uncertain