Gene

KWMTBOMO02767  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003709

Annotation

PREDICTED:_long-chain-fatty-acid--CoA_ligase_ACSBG2-like_isoform_X2_[Papilio_xuthus]

Location

Bomo_Chr5(-):10406974-10442740      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.318 Mitochondrial   Reliability : 1.998

CDS

ATGGACGCGGTACAGGAACACAAAAACAATACGGAAAACTCAACGGTTACAGTTGAGAACGGTGCTACAGATACCCTTAAAACAAACAACATGCAAGTGGCGAATGGAGTCAGTCAACAAATATACTTAAACGGACCGGATCAAGTAGTGCCCGCAGAAAGTTACACAACAGCAATTCCTGGATGTCACGTCAAACTTCGCATCGCCCCCCGCGGCTTAGCAGCGGAGCCTCCTATATCAGTGCCTGGATTACTAAGTCGAACTACCGCCAGATATCCTAACGCTACAGCACTGGCCACAAAAAAGGCTGATGGGAAATGGCACAAAATCACCTACAAGCAATACCAGGATCGTGTCAGAATAATAGCAAAAGCTTTCTTGAAACTGGGTCTAGACAGGTACCATTCAGTCAGTATCCTCGGTTTCAACTCTGAACAATGGTTCATCGCCGATCTTGCAGCTATCCACGCTGGTGGGTATGCGGCGGGAATATATACAACCAACTCGGCCGACGCATGCTTCCACTGCCTCGAATCGTCGCGGGCTAACATCTGTGCCGTACAAGACAAGAAACAGCTGGACAAGATCCTTTCTGTGAAGCACAAGCTTCCCTTGTTGAAAGCCATCGTGCAATGGGAAGGACCTGTTGATACCTCCATACCTGGAATATATAGTTGGGACCAGCTACTAGAGATAGGAGCGAAGGAGCCAGACACGCAACTGAACGAAATTCTGAAAAGTATTGCCGTTAACGAATGCTGCACGTTGGTTTATACTTCAGGAACGGTGGGCCCGCCTAAGGCCGTGATGCTGTCTCACGATAACCTGACATGGGACGCGTTCGGCATCGGCGAGAGATGTCAGAATCTACAACCCACAAGAGACAGGCTCGTTTCATTCTTACCGCTCAGCCACGTTGCCGCTCAGGTAGTGGACATTTATACAACCTTGTCTAACGCTGTGACAGTGTACTTTGCACAACCAGACGCTCTGAAAGGCAGCCTCGTTGAAACCCTCAAAGAAGTCAGGCCAACAAGATTCTTGGGGGTCCCTCGGGTATGGGAAAAAATGTACGAGAAAATCATGGCCGTAGGTGCATCCAGTGGTCCACTTAAAAAGCAGATTGCTTTATGGGCCAAAGAGAAAGGGCTGCAATATCACCTCTCCAGGATTAACGGGTACGAGGGTTCGTCAGTTGGGTACAAGCTCGCTAAGTCTTTAGTGTTCAGCAAGATTCATGAGTCACTTGGCTTGGACAAGTGCAGCACTTTCGTAACGGCAGCTGCGCCACTGTCTCCCGACATCAAGAAATTCTTCCTTTCGTTGGATATCCCCCTTGTCGATGCTTTCGGAATGAGCGAGGCGGCCGGAGCCCACACCCTAAGTATTTATCCTAAGTTTTCTCTTGACTCTGCTGGCGAGATTTTGGAGGGAACCGAGACGAAATTCGGCGGCTCCATGAGTCCCAACGGTCCCGGTGAGATCATGATGAGAGGACGACACGTCTTTATGGGTTATTTGAACGACGCAGAAAAGACTAAAGGTGCTATCGACGATGATGGCTGGTTACTCTCCGGGGATGTTGGCAGAGTCGATTCGAACAATCTACTCTATATTACTGGTAGGATAAAGGAGCTGCTAATTACGGCCGGCGGCGAGAATGTGGCTCCAGTGCTGATCGAGCAAGCTATTCAAGCTGAACTCCTGCATGTAGGCTACGCTGTGCTCATTGGAGACCGACGAAAGTTCCTCTCTGTCTTGTTGACTCTGAAGACTAAGGTGAGTCCGGAGACGGGCGAGCCTTTAGATGAATTGGAAAGTGAAGCGAGGAAGTGGGTTGCTAGTTTGGGCAGTTCCGCAACTAAACTCAGTGAAATCGTTAACAGTAAAGACCCAGCGGTCCACAAAGCTATAGAGGCGGGTATCACACGCGCAAATAAGCATGCCATATCTAACGCTCAAAAAGTACAAAAGTTTGCGATCCTTCCCTCAGACTTCTCTGTGTATACCGGGGAATTGGGGCCAACATTAAAAATTAAGAGGAACGTCGTCTATGAGAAGTACAAAGACATAATTGAAGACTTTTACAAAGAGTGA

Protein

MDAVQEHKNNTENSTVTVENGATDTLKTNNMQVANGVSQQIYLNGPDQVVPAESYTTAIPGCHVKLRIAPRGLAAEPPISVPGLLSRTTARYPNATALATKKADGKWHKITYKQYQDRVRIIAKAFLKLGLDRYHSVSILGFNSEQWFIADLAAIHAGGYAAGIYTTNSADACFHCLESSRANICAVQDKKQLDKILSVKHKLPLLKAIVQWEGPVDTSIPGIYSWDQLLEIGAKEPDTQLNEILKSIAVNECCTLVYTSGTVGPPKAVMLSHDNLTWDAFGIGERCQNLQPTRDRLVSFLPLSHVAAQVVDIYTTLSNAVTVYFAQPDALKGSLVETLKEVRPTRFLGVPRVWEKMYEKIMAVGASSGPLKKQIALWAKEKGLQYHLSRINGYEGSSVGYKLAKSLVFSKIHESLGLDKCSTFVTAAAPLSPDIKKFFLSLDIPLVDAFGMSEAAGAHTLSIYPKFSLDSAGEILEGTETKFGGSMSPNGPGEIMMRGRHVFMGYLNDAEKTKGAIDDDGWLLSGDVGRVDSNNLLYITGRIKELLITAGGENVAPVLIEQAIQAELLHVGYAVLIGDRRKFLSVLLTLKTKVSPETGEPLDELESEARKWVASLGSSATKLSEIVNSKDPAVHKAIEAGITRANKHAISNAQKVQKFAILPSDFSVYTGELGPTLKIKRNVVYEKYKDIIEDFYKE

Uniprot

H9J2H2   A0A2H1WBR3   A0A212ETC2   A0A194QQ00   A0A194PN76   D6W7W1   + More
A0A1B6E357   A0A2J7Q6C4   A0A2J7PZA5   A0A0L7RC40   K7J0T7   A0A232EWN7   A0A154NWY3   A0A067RJA3   A0A1L8DZG0   A0A1L8DYX0   A0A0C9QWM6   A0A1Q3FHG1   A0A1Q3FHD0   A0A2H8TZV7   E2A0J9   A0A1Q3FHI7   A0A0P4WGA2   A0A2A3EV16   A0A0J7K611   A0A088AJ72   J9JZ72   A0A182G222   A0A0T6AX18   A0A158NDN0   U5ETP1   A0A0P6J1B4   A0A026VZ11   A0A1S4JSS5   A0A195DBC6   A0A195DA07   A0A195BQA9   A0A182KMG2   A0A1S4GYP3   A0A2P2HVM7   A0A151XEH5   A0A182Q2C2   A0A182JF87   A0A2M3YZ03   W5LY77   A0A0P6BIV8   A0A182X5Z7   A0A0N8E9F9   A0A182LWE1   T1DPW4   A0A2M4BG99   A0A0P5EJR5   A0A0P5K6B5   A0A0P5KPF1   A0A0P4ZU62   A0A0N8ATF2   A0A0P5KDC8   A0A2M3YZ29   A0A0P6DJ83   A0A0P5NIA0   A0A0P5KA82   A0A2D0QW32   A0A0P5NHN4   E2C5D9   W5LY99   A0A1S3T5W5   B2GU97   A0A1S3T5V8   A0A034VJX4   A0A0P5HLP9   A0A0N8B0A2   A0A2M4A0Z1   A0A0K8UJF5   A0A1S3T5V9   A0A0N8DXD5   R0L2R8   Q7Q8J3   A0A0P5HZS1   U3I8S1   A0A195F3I3   A0A0A1XKY4   A0A182YQH4   A0A0P5Q6P9   F4WZ31   A0A0P5PF49   A0A3P8YES4   W8C978   A0A0P6DCA1   A0A195BP74   A0A0P5SJA2   A0A084VFF4   A0A3P8YDJ3   A0A182NTC4   A0A2M4CTV8   A0A2M4CTS3   A0A3P8YDI0   U3KHC6   W5LB37   A0A182WFK2   A0A060WEZ3  

Pubmed

19121390    22118469    26354079    18362917    19820115    20075255    + More
28648823    24845553    20798317    26483478    21347285    26999592    24508170    20966253    12364791    25348373    23749191    25830018    25244985    21719571    25069045    24495485    24438588    25329095    24755649   

EMBL

BABH01007945    BABH01007946    BABH01007947    BABH01007948    BABH01007949    BABH01007950    + More
ODYU01007289    SOQ49934.1    AGBW02012631    OWR44701.1    KQ461181    KPJ07598.1    KQ459597    KPI94886.1    KQ971307    EFA11034.1    GEDC01006467    GEDC01004961    JAS30831.1    JAS32337.1    NEVH01017534    PNF24131.1    NEVH01020337    PNF21671.1    KQ414617    KOC68404.1    NNAY01001834    OXU22764.1    KQ434777    KZC04179.1    KK852474    KDR23088.1    GFDF01002412    JAV11672.1    GFDF01002413    JAV11671.1    GBYB01008139    JAG77906.1    GFDL01008057    JAV26988.1    GFDL01008113    JAV26932.1    GFXV01008050    MBW19855.1    GL435626    EFN72902.1    GFDL01008014    JAV27031.1    GDRN01090836    JAI60402.1    KZ288185    PBC34989.1    LBMM01013352    KMQ85684.1    ABLF02035823    JXUM01006539    JXUM01006540    JXUM01006541    LJIG01022614    KRT79624.1    ADTU01012724    ADTU01012725    GANO01001819    JAB58052.1    GDUN01000099    JAN95820.1    KK107578    EZA48686.1    KQ981082    KYN09719.1    KYN09718.1    KQ976424    KYM88318.1    AAAB01008944    IACF01000053    LAB65867.1    KQ982254    KYQ58786.1    AXCN02000715    GGFM01000742    MBW21493.1    AHAT01011275    AHAT01011276    GDIP01014366    JAM89349.1    GDIQ01048796    JAN45941.1    AXCM01001960    GAMD01002974    JAA98616.1    GGFJ01002906    MBW52047.1    GDIQ01268785    JAJ82939.1    GDIQ01188544    JAK63181.1    GDIQ01188546    GDIQ01188543    JAK63182.1    GDIP01209615    JAJ13787.1    GDIQ01244643    JAK07082.1    GDIQ01187046    JAK64679.1    GGFM01000773    MBW21524.1    GDIQ01245882    GDIQ01191250    GDIQ01189990    GDIQ01188545    GDIQ01099426    GDIQ01085799    LRGB01000568    JAN08938.1    KZS17817.1    GDIQ01268786    GDIQ01245884    GDIQ01245883    GDIQ01227629    GDIQ01189991    GDIQ01188547    GDIQ01187047    GDIQ01178345    GDIQ01178344    GDIQ01170448    GDIQ01169656    GDIQ01147778    GDIQ01147777    GDIQ01142017    GDIQ01103971    GDIQ01102675    GDIQ01087582    GDIQ01082589    GDIQ01065344    JAL09709.1    GDIQ01204645    GDIQ01187048    GDIQ01187045    JAK64680.1    GDIQ01142016    JAL09710.1    GL452770    EFN76872.1    BC166192    AAI66192.1    GAKP01016530    JAC42422.1    GDIQ01226333    JAK25392.1    GDIQ01225443    JAK26282.1    GGFK01001100    MBW34421.1    GDHF01032806    GDHF01032513    GDHF01025618    GDHF01014609    GDHF01013525    JAI19508.1    JAI19801.1    JAI26696.1    JAI37705.1    JAI38789.1    GDIQ01202841    GDIQ01082588    JAN12149.1    KB744699    EOA94577.1    EAA10184.3    GDIQ01222679    JAK29046.1    ADON01133919    KQ981820    KYN35140.1    GBXI01002742    JAD11550.1    GDIQ01125070    JAL26656.1    GL888465    EGI60534.1    GDIQ01129472    JAL22254.1    GAMC01006881    JAB99674.1    GDIQ01081038    JAN13699.1    KYM88317.1    GDIP01139077    JAL64637.1    ATLV01012386    KE524787    KFB36698.1    GGFL01004575    MBW68753.1    GGFL01004574    MBW68752.1    AGTO01021534    FR904519    CDQ65853.1   

Proteomes

UP000005204    UP000007151    UP000053240    UP000053268    UP000007266    UP000235965    + More
UP000053825    UP000002358    UP000215335    UP000076502    UP000027135    UP000000311    UP000242457    UP000036403    UP000005203    UP000007819    UP000069940    UP000005205    UP000053097    UP000078492    UP000078540    UP000075882    UP000075809    UP000075886    UP000075880    UP000018468    UP000076407    UP000075883    UP000076858    UP000221080    UP000008237    UP000087266    UP000007062    UP000016666    UP000078541    UP000076408    UP000007755    UP000265140    UP000030765    UP000075884    UP000016665    UP000018467    UP000075920    UP000193380   

PRIDE

H9J2H2   

Pfam

PF00501   AMP-binding        + More
PF06080   DUF938
PF07074   TRAP-gamma

Interpro

IPR042099   AMP-dep_Synthh-like_sf        + More
IPR000873   AMP-dep_Synth/Lig       
IPR010342   DUF938       
IPR029063   SAM-dependent_MTases       
IPR020845   AMP-binding_CS       
IPR009779   SSR3       
IPR017972   Cyt_P450_CS       

SUPFAM

SSF53335   SSF53335       

Gene 3D

3.40.50.12780    

ProteinModelPortal

H9J2H2   A0A2H1WBR3   A0A212ETC2   A0A194QQ00   A0A194PN76   D6W7W1   + More
A0A1B6E357   A0A2J7Q6C4   A0A2J7PZA5   A0A0L7RC40   K7J0T7   A0A232EWN7   A0A154NWY3   A0A067RJA3   A0A1L8DZG0   A0A1L8DYX0   A0A0C9QWM6   A0A1Q3FHG1   A0A1Q3FHD0   A0A2H8TZV7   E2A0J9   A0A1Q3FHI7   A0A0P4WGA2   A0A2A3EV16   A0A0J7K611   A0A088AJ72   J9JZ72   A0A182G222   A0A0T6AX18   A0A158NDN0   U5ETP1   A0A0P6J1B4   A0A026VZ11   A0A1S4JSS5   A0A195DBC6   A0A195DA07   A0A195BQA9   A0A182KMG2   A0A1S4GYP3   A0A2P2HVM7   A0A151XEH5   A0A182Q2C2   A0A182JF87   A0A2M3YZ03   W5LY77   A0A0P6BIV8   A0A182X5Z7   A0A0N8E9F9   A0A182LWE1   T1DPW4   A0A2M4BG99   A0A0P5EJR5   A0A0P5K6B5   A0A0P5KPF1   A0A0P4ZU62   A0A0N8ATF2   A0A0P5KDC8   A0A2M3YZ29   A0A0P6DJ83   A0A0P5NIA0   A0A0P5KA82   A0A2D0QW32   A0A0P5NHN4   E2C5D9   W5LY99   A0A1S3T5W5   B2GU97   A0A1S3T5V8   A0A034VJX4   A0A0P5HLP9   A0A0N8B0A2   A0A2M4A0Z1   A0A0K8UJF5   A0A1S3T5V9   A0A0N8DXD5   R0L2R8   Q7Q8J3   A0A0P5HZS1   U3I8S1   A0A195F3I3   A0A0A1XKY4   A0A182YQH4   A0A0P5Q6P9   F4WZ31   A0A0P5PF49   A0A3P8YES4   W8C978   A0A0P6DCA1   A0A195BP74   A0A0P5SJA2   A0A084VFF4   A0A3P8YDJ3   A0A182NTC4   A0A2M4CTV8   A0A2M4CTS3   A0A3P8YDI0   U3KHC6   W5LB37   A0A182WFK2   A0A060WEZ3  

PDB

5MSW     E-value=8.25447e-20,     Score=241

KEGG

733062    K15013 long-chain-fatty-acid--CoA ligase ACSBG [EC:6.2.1.3] | (RefSeq) Abe-1; very long-chain-fatty-

PATHWAY

00061    Fatty acid biosynthesis - Bombyx mori (domestic silkworm)
00071    Fatty acid degradation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01212    Fatty acid metabolism - Bombyx mori (domestic silkworm)

GO

GO:0003824   GO:0016874   GO:0005623   GO:0016021   GO:0006614   GO:0047617   GO:0005829   GO:0005739   GO:0004467   GO:0008152   GO:0004190   GO:0006508   GO:0004889   GO:0005216   GO:0045211   GO:0006281   GO:0048384  

Length:

698

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0661600000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00372

outside

1  -  698

 

 

Pi

207.935277

Theta

182.274497

Tajima's D

0.613889

CLR

0.82161

CSRT

0.544072796360182

Interpretation

Uncertain